Definition Yersinia pseudotuberculosis IP 32953, complete genome.
Accession NC_006155
Length 4,744,671

Click here to switch to the map view.

The map label for this gene is 51595927

Identifier: 51595927

GI number: 51595927

Start: 1917521

End: 1918447

Strand: Reverse

Name: 51595927

Synonym: YPTB1590

Alternate gene names: NA

Gene position: 1918447-1917521 (Counterclockwise)

Preceding gene: 51595928

Following gene: 51595926

Centisome position: 40.43

GC content: 39.37

Gene sequence:

>927_bases
ATGTCAAAAAAATATCAGCCATTGCTTATAACTCATTATATGTCAACATGGGTCACTATAACGGAAGCAGTTGAGATCAC
TACCAAAGCCATAAAACAAAAAATTACTCCTAGCGATATTTATCGTCATGCCTTGAGTGGCAACATCCTACTATCGGTCT
ATTTCCAGTCTCCTGTGATACTTAAGAAGATACAAACTTTTAATGGAAAAATAAAATTCAGGCAGTTTGAGGGAGACCTA
CTTGATAAACTATGCATGCTTGACAGGGACGGTTTTATTTATGGTCAAAATTTAAGACTCTGTACAGAAGCCAGATATGT
TTGTCCTGTGCAACAAATTATAGATACCCCCCTGATAGGCTATGAATATGTTTTGATTCAGCGCATACTGGCACGTGAAC
TTAAATTCCCCTCCCCAATTGTGGGGGCAAGAAAAACTAACCATGGTATTATAGTAAGATTTTCAGAGGAGCTTTTTCAA
ATTTTCGAAACGATGAGTTGGAAAGAACGCGTAGAAAAACAAATTTCCAGACTACCTGAAAACACAGCATTAGATGTCAT
AAAAAAACTAACAGAAGTGACGACCATAAAATATAATCACAATGGGTGTTTTCCTCTTTATACATTACCGCCTGATGCCT
GTTTTGTTATTCGCCACACCGAAGTCGAAAGACTAATTAATTTATACAAAAAAAGGGAGAGTCATCCCATTTCACCTTCC
CGTATGACAACACCGTTATCACGCCTGTTTTGGCTGGCCTGCAAGCACAATGATACTATCAGCCCACTGCTGAATCATCC
CTATAAGCTCCTTTCTATTTTTGAACAATGGGCATCAGACGATGGCATCGGGGAAAAACTGGACGCTGAAACACTGAAAA
ATGCGCTGAAGCGTGGTTCGCCATCTTCGACATCCTTATCCGGCTAA

Upstream 100 bases:

>100_bases
TTTCTCTGTCATAAACCCTCTGATTAATCATAAATAAATACTTGTGACACCAATCTTTTTCCTTAACGGAACGAATTGTT
GTGTAGAAGGAGATAATATT

Downstream 100 bases:

>100_bases
TACCATCCCCATTTGTAATGGCCGACAACCCTAAATAAGGGTTTTGCATCCCTTATTTAGGGCTCACCAGCTTTCTCTCA
GGCTTCCACTGTGTTTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MSKKYQPLLITHYMSTWVTITEAVEITTKAIKQKITPSDIYRHALSGNILLSVYFQSPVILKKIQTFNGKIKFRQFEGDL
LDKLCMLDRDGFIYGQNLRLCTEARYVCPVQQIIDTPLIGYEYVLIQRILARELKFPSPIVGARKTNHGIIVRFSEELFQ
IFETMSWKERVEKQISRLPENTALDVIKKLTEVTTIKYNHNGCFPLYTLPPDACFVIRHTEVERLINLYKKRESHPISPS
RMTTPLSRLFWLACKHNDTISPLLNHPYKLLSIFEQWASDDGIGEKLDAETLKNALKRGSPSSTSLSG

Sequences:

>Translated_308_residues
MSKKYQPLLITHYMSTWVTITEAVEITTKAIKQKITPSDIYRHALSGNILLSVYFQSPVILKKIQTFNGKIKFRQFEGDL
LDKLCMLDRDGFIYGQNLRLCTEARYVCPVQQIIDTPLIGYEYVLIQRILARELKFPSPIVGARKTNHGIIVRFSEELFQ
IFETMSWKERVEKQISRLPENTALDVIKKLTEVTTIKYNHNGCFPLYTLPPDACFVIRHTEVERLINLYKKRESHPISPS
RMTTPLSRLFWLACKHNDTISPLLNHPYKLLSIFEQWASDDGIGEKLDAETLKNALKRGSPSSTSLSG
>Mature_307_residues
SKKYQPLLITHYMSTWVTITEAVEITTKAIKQKITPSDIYRHALSGNILLSVYFQSPVILKKIQTFNGKIKFRQFEGDLL
DKLCMLDRDGFIYGQNLRLCTEARYVCPVQQIIDTPLIGYEYVLIQRILARELKFPSPIVGARKTNHGIIVRFSEELFQI
FETMSWKERVEKQISRLPENTALDVIKKLTEVTTIKYNHNGCFPLYTLPPDACFVIRHTEVERLINLYKKRESHPISPSR
MTTPLSRLFWLACKHNDTISPLLNHPYKLLSIFEQWASDDGIGEKLDAETLKNALKRGSPSSTSLSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35482; Mature: 35351

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKYQPLLITHYMSTWVTITEAVEITTKAIKQKITPSDIYRHALSGNILLSVYFQSPVI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCHH
LKKIQTFNGKIKFRQFEGDLLDKLCMLDRDGFIYGQNLRLCTEARYVCPVQQIIDTPLIG
HHHHHHCCCEEEEEECCHHHHHHHHHHCCCCEEECCCCEEEHHCHHCCCHHHHHCCCCCC
YEYVLIQRILARELKFPSPIVGARKTNHGIIVRFSEELFQIFETMSWKERVEKQISRLPE
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHCCC
NTALDVIKKLTEVTTIKYNHNGCFPLYTLPPDACFVIRHTEVERLINLYKKRESHPISPS
CHHHHHHHHHHHHEEEEECCCCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCH
RMTTPLSRLFWLACKHNDTISPLLNHPYKLLSIFEQWASDDGIGEKLDAETLKNALKRGS
HHHHHHHHHHHHHHCCCCCCCHHHHCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCC
PSSTSLSG
CCCCCCCC
>Mature Secondary Structure 
SKKYQPLLITHYMSTWVTITEAVEITTKAIKQKITPSDIYRHALSGNILLSVYFQSPVI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCHH
LKKIQTFNGKIKFRQFEGDLLDKLCMLDRDGFIYGQNLRLCTEARYVCPVQQIIDTPLIG
HHHHHHCCCEEEEEECCHHHHHHHHHHCCCCEEECCCCEEEHHCHHCCCHHHHHCCCCCC
YEYVLIQRILARELKFPSPIVGARKTNHGIIVRFSEELFQIFETMSWKERVEKQISRLPE
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHCCC
NTALDVIKKLTEVTTIKYNHNGCFPLYTLPPDACFVIRHTEVERLINLYKKRESHPISPS
CHHHHHHHHHHHHEEEEECCCCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCH
RMTTPLSRLFWLACKHNDTISPLLNHPYKLLSIFEQWASDDGIGEKLDAETLKNALKRGS
HHHHHHHHHHHHHHCCCCCCCHHHHCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCC
PSSTSLSG
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA