| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is yeiB
Identifier: 51595858
GI number: 51595858
Start: 1827400
End: 1828575
Strand: Direct
Name: yeiB
Synonym: YPTB1521
Alternate gene names: 51595858
Gene position: 1827400-1828575 (Clockwise)
Preceding gene: 51595857
Following gene: 51595859
Centisome position: 38.51
GC content: 50.26
Gene sequence:
>1176_bases ATGTCGAGTATGCGTCAACGCATCGCAACGTTAGACAGTGCGCGGGGGCTGGCCATTCTTGGCATTCTGCTGCTTAATAT TAGCGCGTTTGGTTTGCCAAAGGCCGCTTATCTCAATCCAGCTTATCTTGGTCTTCCCTCATTATCAGATATCTGGACTT GGGCGATCCTCGATATTGTCGCACAGGTAAAGTTCCTTTCTATATTTGCCATGTTATTTGGTGCAGGCCTTGAGCTGTTA CTTAAGCGTGGGAAAAGTTGGGTACGTGCCCGCCTTTCTTTATTGTTACTACTGGGGTTAATTCACGGCATCTTCTTCTG GGATGGCGATATTCTGTTGGCTTATAGTTTGATTGGTCTGGTGTGTTGGCGAATAATCCAAGATGCCAAAGATGCAGCCA GCTTATTACGTACCGGCGCGGTACTCTATTTGATCGGTGTCGCTGTGTTGTTGTTGCTGGGCTATATTACCCGCGGAGAG CCGGGCCGTTTTTGGCTCCCTGGGCCTGCGGATCTGCAATATGAGCAATTTTGGAAGTTACAGGGTGGGGGAGAGGCTTG GCGTAATCGTCTGGGCCTGTTGTCATCCAACTTGATTGCCATTGGTGCGCAATATGGTTGGGAGTTGGCAGGCTCCATGG TATTCGGCGCTGGGTTGATGCGCTGCGGCTGGCTGCGGGGAGAATTCAGTCTGCGTCACTACCGTAGGCTCGCACTCTTT CTGATATCGCTCTCATTGGTTATCCAAATACCGGGTGTGGCACTGCAAGTGTATGTCGGTTGGGATTACCGCTGGGCGGG TTTTTTGCTACAAGTGCCTCGAGAATTGGGGGCGCCGTTGCAGGCGGTGGGGTATCTGGCGCTGCTCTACGGGTTCTGGC CAACATTATCCCGCTGGGCTATCAGCCATTGGCTGGCAAAGGTTGGCCGTATGGCGCTGAGTAATTATTTATTACAGACA TTGATTTGTACGCTGATTTTTTATCATTTTGGTTTATACCAACAGCTCGATCGTTTGCAACTGTTAGCCGTCGTACCACT GGTTTGGGTCTGTAATGTGATTTTTTCTCTGTTATGGTTACGCTATTTCGTGCAAGGCCCTGTGGAGTGGCTATGGCGTC GGTTAACCGCTTATGCCTGCGGCCAAGAGTTACAAATACGCAACACTAAGCTCTGA
Upstream 100 bases:
>100_bases ATCCAGTCAGAATACGCGTCAGGAATTTCTGCGTGCGGTTCGTCACCACGGCTGATTGGCTTTTTGCCAGAGGGAGGGCC TGTAGGCCCTCGAATACAGG
Downstream 100 bases:
>100_bases CAGAATCAAAAGAGAAAAATGATGTTGTGAGTTGCAAATATGTATGTAAACGTTTTCTTTTTGTAACATGTGTCACGCGG CAATATCCATAAATTGGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MSSMRQRIATLDSARGLAILGILLLNISAFGLPKAAYLNPAYLGLPSLSDIWTWAILDIVAQVKFLSIFAMLFGAGLELL LKRGKSWVRARLSLLLLLGLIHGIFFWDGDILLAYSLIGLVCWRIIQDAKDAASLLRTGAVLYLIGVAVLLLLGYITRGE PGRFWLPGPADLQYEQFWKLQGGGEAWRNRLGLLSSNLIAIGAQYGWELAGSMVFGAGLMRCGWLRGEFSLRHYRRLALF LISLSLVIQIPGVALQVYVGWDYRWAGFLLQVPRELGAPLQAVGYLALLYGFWPTLSRWAISHWLAKVGRMALSNYLLQT LICTLIFYHFGLYQQLDRLQLLAVVPLVWVCNVIFSLLWLRYFVQGPVEWLWRRLTAYACGQELQIRNTKL
Sequences:
>Translated_391_residues MSSMRQRIATLDSARGLAILGILLLNISAFGLPKAAYLNPAYLGLPSLSDIWTWAILDIVAQVKFLSIFAMLFGAGLELL LKRGKSWVRARLSLLLLLGLIHGIFFWDGDILLAYSLIGLVCWRIIQDAKDAASLLRTGAVLYLIGVAVLLLLGYITRGE PGRFWLPGPADLQYEQFWKLQGGGEAWRNRLGLLSSNLIAIGAQYGWELAGSMVFGAGLMRCGWLRGEFSLRHYRRLALF LISLSLVIQIPGVALQVYVGWDYRWAGFLLQVPRELGAPLQAVGYLALLYGFWPTLSRWAISHWLAKVGRMALSNYLLQT LICTLIFYHFGLYQQLDRLQLLAVVPLVWVCNVIFSLLWLRYFVQGPVEWLWRRLTAYACGQELQIRNTKL >Mature_390_residues SSMRQRIATLDSARGLAILGILLLNISAFGLPKAAYLNPAYLGLPSLSDIWTWAILDIVAQVKFLSIFAMLFGAGLELLL KRGKSWVRARLSLLLLLGLIHGIFFWDGDILLAYSLIGLVCWRIIQDAKDAASLLRTGAVLYLIGVAVLLLLGYITRGEP GRFWLPGPADLQYEQFWKLQGGGEAWRNRLGLLSSNLIAIGAQYGWELAGSMVFGAGLMRCGWLRGEFSLRHYRRLALFL ISLSLVIQIPGVALQVYVGWDYRWAGFLLQVPRELGAPLQAVGYLALLYGFWPTLSRWAISHWLAKVGRMALSNYLLQTL ICTLIFYHFGLYQQLDRLQLLAVVPLVWVCNVIFSLLWLRYFVQGPVEWLWRRLTAYACGQELQIRNTKL
Specific function: Involved in transport (Potential) [H]
COG id: COG2311
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yxaH and yrkO [H]
Homologues:
Organism=Escherichia coli, GI1788475, Length=380, Percent_Identity=59.7368421052632, Blast_Score=447, Evalue=1e-127,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007349 [H]
Pfam domain/function: PF04235 DUF418 [H]
EC number: NA
Molecular weight: Translated: 44108; Mature: 43977
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSMRQRIATLDSARGLAILGILLLNISAFGLPKAAYLNPAYLGLPSLSDIWTWAILDIV CCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHCCCHHCCCCCHHHHHHHHHHHHH AQVKFLSIFAMLFGAGLELLLKRGKSWVRARLSLLLLLGLIHGIFFWDGDILLAYSLIGL HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH VCWRIIQDAKDAASLLRTGAVLYLIGVAVLLLLGYITRGEPGRFWLPGPADLQYEQFWKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHH QGGGEAWRNRLGLLSSNLIAIGAQYGWELAGSMVFGAGLMRCGWLRGEFSLRHYRRLALF CCCHHHHHHHHHHHHCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LISLSLVIQIPGVALQVYVGWDYRWAGFLLQVPRELGAPLQAVGYLALLYGFWPTLSRWA HHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH ISHWLAKVGRMALSNYLLQTLICTLIFYHFGLYQQLDRLQLLAVVPLVWVCNVIFSLLWL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RYFVQGPVEWLWRRLTAYACGQELQIRNTKL HHHHHCHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SSMRQRIATLDSARGLAILGILLLNISAFGLPKAAYLNPAYLGLPSLSDIWTWAILDIV CHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHCCCHHCCCCCHHHHHHHHHHHHH AQVKFLSIFAMLFGAGLELLLKRGKSWVRARLSLLLLLGLIHGIFFWDGDILLAYSLIGL HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH VCWRIIQDAKDAASLLRTGAVLYLIGVAVLLLLGYITRGEPGRFWLPGPADLQYEQFWKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHH QGGGEAWRNRLGLLSSNLIAIGAQYGWELAGSMVFGAGLMRCGWLRGEFSLRHYRRLALF CCCHHHHHHHHHHHHCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LISLSLVIQIPGVALQVYVGWDYRWAGFLLQVPRELGAPLQAVGYLALLYGFWPTLSRWA HHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH ISHWLAKVGRMALSNYLLQTLICTLIFYHFGLYQQLDRLQLLAVVPLVWVCNVIFSLLWL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RYFVQGPVEWLWRRLTAYACGQELQIRNTKL HHHHHCHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503; 1619663 [H]