Click here to switch to the map view.

The map label for this gene is ybjJ [C]

Identifier: 51595604

GI number: 51595604

Start: 1506909

End: 1508063

Strand: Reverse

Name: ybjJ [C]

Synonym: YPTB1260

Alternate gene names: 51595604

Gene position: 1508063-1506909 (Counterclockwise)

Preceding gene: 51595606

Following gene: 51595603

Centisome position: 31.78

GC content: 50.13

Gene sequence:

>1155_bases
ATGAGCACCAAAATACACCAACAAGCAGTACAGCCCGGTATTAGCCAACAAGTTTCTACCCGGTTAGCTTTTTTTATTGC
CGGGTTAGGCATGGCCGCTTGGGCACCACTTGTTCCCTTTGCAAAAGCGCGCATTGGTCTTAATGATGCCTCATTGGGTT
TATTACTGTTATGCATTGGTATTGGATCGATGCTGGCGATGCCGCTCACTGGCGTGCTTACCGCGAAGTGGGGCTGTCGG
GCCGTCATTTTACTGGCAGGCGCAGTGCTCTGTTTAGATTTGCCTTTACTCGTATTGATGAATACTCCCGCGACGATGGC
TATCGCACTATTAGTATTCGGTGCAGCTATGGGCATAATAGATGTGGCGATGAACATTCAGGCTGTCATTGTTGAAAAAG
CCAGTGGCCGGGCGATGATGTCTGGCTTCCACGGTTTATTCAGTGTCGGTGGGATTGTTGGTGCAGGAGGTGTCAGTGCT
CTATTGTGGCTAGGCCTCAACCCACTGACAGCGATTATGGCTACCGTAGTACTCATGATTATTTTGCTGCTGGCAGCCAA
TAAGAATCTGTTACGTGGCAGCGGTGAACCCCATGATGGGCCATTGTTTGTTTTTCCCCGTGGCTGGGTGATGTTCATCG
GCTTTTTATGTTTTGTCATGTTTTTGGCAGAAGGCTCGATGCTTGACTGGAGTGCCGTCTTCCTGACGACGCTACGCGGC
ATGTCGCCATCACAAGCAGGTATGGGCTACGCCGTATTCGCCATCGCTATGACACTTGGCCGCCTAAACGGTGATCGGAT
TGTCAATGGGCTGGGCCGTTACAAGGTCTTATTAGGTGGCAGTTTATGTTCTGCCATCGGGATTATTATCGCAATCAGTA
TTGATAGCTCAATGGCTGCTATTATTGGCTTCATGTTAGTGGGTTTCGGCGCATCGAATGTGGTACCGATCTTGTTTACC
GCCGCAGGTAATCAAACCGTTATGCCTGCCAACCTGGCGGTTGCGTCAATTACAACGATCGGTTACGCGGGAATTTTGGC
TGGCCCGGCAGCTATCGGCTTTATTGCACAATTAAGTAGTCTATCGGTTGCTTTTGGCTGTGTAGCACTTCTGTTATTAA
CCGTTGCTGCCAGCGCCAGAGCCGTCACGCGCTAA

Upstream 100 bases:

>100_bases
TTCTGCTTATCAGCACAAATCACTTCGACCCGGATTTAGCTTTGTGATAGAAACGTCTGTCTATATCACTTTTTCACTTC
AATAGTAGATCTGATACCTC

Downstream 100 bases:

>100_bases
CCAAGGGAATCGGCATTATCGTTATGCAAAACAATTCGTCTACCCACTCAGCGGCTAACATTACACGTTACTTCTGGCTA
TTTATCGTACTTCTGCTCAT

Product: MFS tranporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 383

Protein sequence:

>384_residues
MSTKIHQQAVQPGISQQVSTRLAFFIAGLGMAAWAPLVPFAKARIGLNDASLGLLLLCIGIGSMLAMPLTGVLTAKWGCR
AVILLAGAVLCLDLPLLVLMNTPATMAIALLVFGAAMGIIDVAMNIQAVIVEKASGRAMMSGFHGLFSVGGIVGAGGVSA
LLWLGLNPLTAIMATVVLMIILLLAANKNLLRGSGEPHDGPLFVFPRGWVMFIGFLCFVMFLAEGSMLDWSAVFLTTLRG
MSPSQAGMGYAVFAIAMTLGRLNGDRIVNGLGRYKVLLGGSLCSAIGIIIAISIDSSMAAIIGFMLVGFGASNVVPILFT
AAGNQTVMPANLAVASITTIGYAGILAGPAAIGFIAQLSSLSVAFGCVALLLLTVAASARAVTR

Sequences:

>Translated_384_residues
MSTKIHQQAVQPGISQQVSTRLAFFIAGLGMAAWAPLVPFAKARIGLNDASLGLLLLCIGIGSMLAMPLTGVLTAKWGCR
AVILLAGAVLCLDLPLLVLMNTPATMAIALLVFGAAMGIIDVAMNIQAVIVEKASGRAMMSGFHGLFSVGGIVGAGGVSA
LLWLGLNPLTAIMATVVLMIILLLAANKNLLRGSGEPHDGPLFVFPRGWVMFIGFLCFVMFLAEGSMLDWSAVFLTTLRG
MSPSQAGMGYAVFAIAMTLGRLNGDRIVNGLGRYKVLLGGSLCSAIGIIIAISIDSSMAAIIGFMLVGFGASNVVPILFT
AAGNQTVMPANLAVASITTIGYAGILAGPAAIGFIAQLSSLSVAFGCVALLLLTVAASARAVTR
>Mature_383_residues
STKIHQQAVQPGISQQVSTRLAFFIAGLGMAAWAPLVPFAKARIGLNDASLGLLLLCIGIGSMLAMPLTGVLTAKWGCRA
VILLAGAVLCLDLPLLVLMNTPATMAIALLVFGAAMGIIDVAMNIQAVIVEKASGRAMMSGFHGLFSVGGIVGAGGVSAL
LWLGLNPLTAIMATVVLMIILLLAANKNLLRGSGEPHDGPLFVFPRGWVMFIGFLCFVMFLAEGSMLDWSAVFLTTLRGM
SPSQAGMGYAVFAIAMTLGRLNGDRIVNGLGRYKVLLGGSLCSAIGIIIAISIDSSMAAIIGFMLVGFGASNVVPILFTA
AGNQTVMPANLAVASITTIGYAGILAGPAAIGFIAQLSSLSVAFGCVALLLLTVAASARAVTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily

Homologues:

Organism=Escherichia coli, GI1787068, Length=352, Percent_Identity=29.8295454545455, Blast_Score=130, Evalue=2e-31,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): Y1221_YERPE (Q7CH99)

Other databases:

- EMBL:   AL590842
- EMBL:   AE009952
- EMBL:   AE017042
- PIR:   AG0149
- RefSeq:   NP_670267.1
- RefSeq:   NP_992296.1
- RefSeq:   YP_002346253.1
- ProteinModelPortal:   Q7CH99
- GeneID:   1147914
- GeneID:   1174066
- GeneID:   2766477
- GenomeReviews:   AE009952_GR
- GenomeReviews:   AE017042_GR
- GenomeReviews:   AL590842_GR
- KEGG:   ype:YPO1221
- KEGG:   ypk:y2967
- KEGG:   ypm:YP_0917
- HOGENOM:   HBG696900
- OMA:   AVTTLGY
- ProtClustDB:   CLSK888760
- BioCyc:   YPES187410:Y2967-MONOMER
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196

Pfam domain/function: PF07690 MFS_1; SSF103473 MFS_gen_substrate_transporter

EC number: NA

Molecular weight: Translated: 39369; Mature: 39238

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x177bf394)-; HASH(0x19247b0c)-; HASH(0x19f9bbdc)-; HASH(0x1a3d61dc)-; HASH(0x18e4a204)-; HASH(0x1997eeac)-; HASH(0x1a34ee80)-; HASH(0x1a178d54)-; HASH(0x19e1b034)-; HASH(0x199a9004)-; HASH(0x183fd5e8)-; HASH(0x19e0a0e8)-;

Cys/Met content:

1.6 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTKIHQQAVQPGISQQVSTRLAFFIAGLGMAAWAPLVPFAKARIGLNDASLGLLLLCIG
CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
IGSMLAMPLTGVLTAKWGCRAVILLAGAVLCLDLPLLVLMNTPATMAIALLVFGAAMGII
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
DVAMNIQAVIVEKASGRAMMSGFHGLFSVGGIVGAGGVSALLWLGLNPLTAIMATVVLMI
HHHHCCEEEEEECCCCHHHHHHHHHHHHHHCHHCCCHHHHHHHHCCCHHHHHHHHHHHHH
ILLLAANKNLLRGSGEPHDGPLFVFPRGWVMFIGFLCFVMFLAEGSMLDWSAVFLTTLRG
HHHHHCCCCHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC
MSPSQAGMGYAVFAIAMTLGRLNGDRIVNGLGRYKVLLGGSLCSAIGIIIAISIDSSMAA
CCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCEEEEECHHHHHHHHEEEEEECCCHHHH
IIGFMLVGFGASNVVPILFTAAGNQTVMPANLAVASITTIGYAGILAGPAAIGFIAQLSS
HHHHHHHHCCCCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSVAFGCVALLLLTVAASARAVTR
HHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure 
STKIHQQAVQPGISQQVSTRLAFFIAGLGMAAWAPLVPFAKARIGLNDASLGLLLLCIG
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
IGSMLAMPLTGVLTAKWGCRAVILLAGAVLCLDLPLLVLMNTPATMAIALLVFGAAMGII
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
DVAMNIQAVIVEKASGRAMMSGFHGLFSVGGIVGAGGVSALLWLGLNPLTAIMATVVLMI
HHHHCCEEEEEECCCCHHHHHHHHHHHHHHCHHCCCHHHHHHHHCCCHHHHHHHHHHHHH
ILLLAANKNLLRGSGEPHDGPLFVFPRGWVMFIGFLCFVMFLAEGSMLDWSAVFLTTLRG
HHHHHCCCCHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC
MSPSQAGMGYAVFAIAMTLGRLNGDRIVNGLGRYKVLLGGSLCSAIGIIIAISIDSSMAA
CCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCEEEEECHHHHHHHHEEEEEECCCHHHH
IIGFMLVGFGASNVVPILFTAAGNQTVMPANLAVASITTIGYAGILAGPAAIGFIAQLSS
HHHHHHHHCCCCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSVAFGCVALLLLTVAASARAVTR
HHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430