| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is cinA [C]
Identifier: 51595594
GI number: 51595594
Start: 1490556
End: 1491749
Strand: Direct
Name: cinA [C]
Synonym: YPTB1250
Alternate gene names: 51595594
Gene position: 1490556-1491749 (Clockwise)
Preceding gene: 51595591
Following gene: 51595600
Centisome position: 31.42
GC content: 53.77
Gene sequence:
>1194_bases ATGATCAGAGTCGAGATGTTGAGTACCGGAGATGAAGTGCTGCATGGGCAGATTATTGATACCAATGCTGCCTGGCTGGC TGATTATTTCTTTAATCAGGGTTTGCCAATCAGCAGCCGGGAAACCGTCGGCGATGATATTTCGGCCCTTATTGAGGTGT TGACTGAGCGCAGTCAAGTTGCTGATGTGTTGATTGTCAATGGTGGCCTGGGGCCGACCAGTGATGATTTGAGCGCCTTG GCTGCCGCACGAGCTGCGGGTGTGGAACTGATTGAGCACCTGGAATGGATTGCTCGCATGGAAGCGTTCTTTATAGCGCG TGGCCGCGTGATGTCGGCAACTAATCGTAAGCAGGCCCATATTCCGGCCAATGCTGAAATGCTGGACAACCCCGTGGGCA CGGCATGTGGCTTTGTTCTGCGGCTAAATAAGTGCCTGATGTTTTTCACCCCGGGGGTGCCATCTGAATTTAAAGTGATG GTTGAACAGCAGATTATGCCGCGTCTACGGCAGCATTTTGAGGTGGCTGAACCGCCATTATGTTTACGGATGACCACTTT TGGTCGTTCAGAGAGTGATCTGGCGCTGGAGCTGGATCCGTTACCACTACCTGAAGGCGTGGTGCTGGGTTACCGTTCAT CGGCCCCAATCATTGAGTTGAAACTCACCGGCCCAGCGTCACAACGCTCGGCAATGGAGCAAGTCTGGCAGCAGGTGAGG GCGGTGGCAGGCGAAAGCACGCTTTTCGAAGGTACTCAGGGCTTGCCAGCACTCTTAACCGAACAATTGACACAGCGTGG CTTATTGCTGGCGGTGAGTGAGCAATTTACCGCTGGGCTGATGAACTGGCAGTTACAGAGTGCGGGAGCACCACTGGTCG GCGGTGAGTTGTTACCCGCGCATTGCCAGGAGTCGCTGAGTGAGGTGGCTAGCCGCGCACAGTCATTGTCTACGCTGTGT GGTGCACAGGTCGTGTTGGCTATCAGTGCGATGCAACATGATTGTCTGAGTGTGGCATTACATACCCCAGAAAGGACTTT TGCTCAGACAGTGCGCTATCAGGCGAGTCGCCATGGTTTGCGTATCCGTCAGGAAAGCAGCGCGATGTTGGCACAGGATA TGTTACGCCGCTGGCTAAAGGGCGGCTCAGTGTGCGGGCAGCATGGTTGGTTGGATATTATTGAGATTTTGTAA
Upstream 100 bases:
>100_bases CGGGCATACATAGTGCAGTGATCCAAATAGCACAGAGAAATGATTGTATTTAGGTGACGTCATTCTTAAAGTGACGCAGT GAGCATAAACGGAGAAGAAA
Downstream 100 bases:
>100_bases TTAAAAGAGAATGTTAATATTTAGCCCAGGCGCGGAATAGCGCCTGGTTAATGAGTGCTATTTGACCTGCGCACTTCTGA TATCTTCGCCCGCTTCCCAG
Product: competence damage-inducible protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MIRVEMLSTGDEVLHGQIIDTNAAWLADYFFNQGLPISSRETVGDDISALIEVLTERSQVADVLIVNGGLGPTSDDLSAL AAARAAGVELIEHLEWIARMEAFFIARGRVMSATNRKQAHIPANAEMLDNPVGTACGFVLRLNKCLMFFTPGVPSEFKVM VEQQIMPRLRQHFEVAEPPLCLRMTTFGRSESDLALELDPLPLPEGVVLGYRSSAPIIELKLTGPASQRSAMEQVWQQVR AVAGESTLFEGTQGLPALLTEQLTQRGLLLAVSEQFTAGLMNWQLQSAGAPLVGGELLPAHCQESLSEVASRAQSLSTLC GAQVVLAISAMQHDCLSVALHTPERTFAQTVRYQASRHGLRIRQESSAMLAQDMLRRWLKGGSVCGQHGWLDIIEIL
Sequences:
>Translated_397_residues MIRVEMLSTGDEVLHGQIIDTNAAWLADYFFNQGLPISSRETVGDDISALIEVLTERSQVADVLIVNGGLGPTSDDLSAL AAARAAGVELIEHLEWIARMEAFFIARGRVMSATNRKQAHIPANAEMLDNPVGTACGFVLRLNKCLMFFTPGVPSEFKVM VEQQIMPRLRQHFEVAEPPLCLRMTTFGRSESDLALELDPLPLPEGVVLGYRSSAPIIELKLTGPASQRSAMEQVWQQVR AVAGESTLFEGTQGLPALLTEQLTQRGLLLAVSEQFTAGLMNWQLQSAGAPLVGGELLPAHCQESLSEVASRAQSLSTLC GAQVVLAISAMQHDCLSVALHTPERTFAQTVRYQASRHGLRIRQESSAMLAQDMLRRWLKGGSVCGQHGWLDIIEIL >Mature_397_residues MIRVEMLSTGDEVLHGQIIDTNAAWLADYFFNQGLPISSRETVGDDISALIEVLTERSQVADVLIVNGGLGPTSDDLSAL AAARAAGVELIEHLEWIARMEAFFIARGRVMSATNRKQAHIPANAEMLDNPVGTACGFVLRLNKCLMFFTPGVPSEFKVM VEQQIMPRLRQHFEVAEPPLCLRMTTFGRSESDLALELDPLPLPEGVVLGYRSSAPIIELKLTGPASQRSAMEQVWQQVR AVAGESTLFEGTQGLPALLTEQLTQRGLLLAVSEQFTAGLMNWQLQSAGAPLVGGELLPAHCQESLSEVASRAQSLSTLC GAQVVLAISAMQHDCLSVALHTPERTFAQTVRYQASRHGLRIRQESSAMLAQDMLRRWLKGGSVCGQHGWLDIIEIL
Specific function: Unknown
COG id: COG1058
COG function: function code R; Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CinA family [H]
Homologues:
Organism=Escherichia coli, GI1788583, Length=395, Percent_Identity=59.746835443038, Blast_Score=493, Evalue=1e-141, Organism=Saccharomyces cerevisiae, GI6323832, Length=179, Percent_Identity=26.2569832402235, Blast_Score=73, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008135 - InterPro: IPR020817 - InterPro: IPR001453 [H]
Pfam domain/function: PF00994 MoCF_biosynth [H]
EC number: NA
Molecular weight: Translated: 43279; Mature: 43279
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRVEMLSTGDEVLHGQIIDTNAAWLADYFFNQGLPISSRETVGDDISALIEVLTERSQV CEEEEEECCCCHHHCCEEECCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH ADVLIVNGGLGPTSDDLSALAAARAAGVELIEHLEWIARMEAFFIARGRVMSATNRKQAH CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCC IPANAEMLDNPVGTACGFVLRLNKCLMFFTPGVPSEFKVMVEQQIMPRLRQHFEVAEPPL CCCCHHHHCCCHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCE CLRMTTFGRSESDLALELDPLPLPEGVVLGYRSSAPIIELKLTGPASQRSAMEQVWQQVR EEEEEECCCCCCCCEEEECCCCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHH AVAGESTLFEGTQGLPALLTEQLTQRGLLLAVSEQFTAGLMNWQLQSAGAPLVGGELLPA HHHCCCHHCCCCCCCHHHHHHHHHHCCEEEEEHHHHHHHHHCCCHHCCCCCCCCCCCCHH HCQESLSEVASRAQSLSTLCGAQVVLAISAMQHDCLSVALHTPERTFAQTVRYQASRHGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHCCC RIRQESSAMLAQDMLRRWLKGGSVCGQHGWLDIIEIL EEECHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHC >Mature Secondary Structure MIRVEMLSTGDEVLHGQIIDTNAAWLADYFFNQGLPISSRETVGDDISALIEVLTERSQV CEEEEEECCCCHHHCCEEECCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH ADVLIVNGGLGPTSDDLSALAAARAAGVELIEHLEWIARMEAFFIARGRVMSATNRKQAH CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCC IPANAEMLDNPVGTACGFVLRLNKCLMFFTPGVPSEFKVMVEQQIMPRLRQHFEVAEPPL CCCCHHHHCCCHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCE CLRMTTFGRSESDLALELDPLPLPEGVVLGYRSSAPIIELKLTGPASQRSAMEQVWQQVR EEEEEECCCCCCCCEEEECCCCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHH AVAGESTLFEGTQGLPALLTEQLTQRGLLLAVSEQFTAGLMNWQLQSAGAPLVGGELLPA HHHCCCHHCCCCCCCHHHHHHHHHHCCEEEEEHHHHHHHHHCCCHHCCCCCCCCCCCCHH HCQESLSEVASRAQSLSTLCGAQVVLAISAMQHDCLSVALHTPERTFAQTVRYQASRHGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHCCC RIRQESSAMLAQDMLRRWLKGGSVCGQHGWLDIIEIL EEECHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA