| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is ybhG [C]
Identifier: 51595556
GI number: 51595556
Start: 1445185
End: 1446171
Strand: Reverse
Name: ybhG [C]
Synonym: YPTB1212
Alternate gene names: 51595556
Gene position: 1446171-1445185 (Counterclockwise)
Preceding gene: 51595557
Following gene: 51595555
Centisome position: 30.48
GC content: 52.48
Gene sequence:
>987_bases ATGAATCGTAAGAAGATTATCGTGGCTGCCGTTATTGTCGCTCTATTAGCAACGCTAGCGTACGGCTGGCATTATTATCG TCAGCAAAATGACGCGTCACTGACCCTCTACGGTAACGTAGATATCCGCACGGTAAATCTGGGCTTTCGTGTCGCTGGCC GCCTCGCCTCACTGGCAGTAGATGAGGGAGATGATATTCATCCGGGGCAAACGCTAGGGAAATTGGATGACGGCCCTTAT CTAAATGCGCTCAAGCAGGCGCAAGCCAATGTACAAAGTGCACAAGCCCAATTGGCATTACTGAAAGCGGGTTATCGTGA AGAGGAAATTGCGCAAGTAAGGTCCGAGGTGGCTCAGCGACAGGCCGCCTTTGACTACGCCGATAACTTCCTAAAACGCC AGCAGGGGTTGTGGGCCAGTAAAGCCGTATCCGCCAATGAGCTGGAGAATGCCCGTACCGCACGCAACCAAGCGCGGGCT AATCTGCAAGCAGCAAAAGATAAGCTCGCACAATTTTTGAGTGGTAACCGCCCACAAGAAATCGCTCAGGCCGAGGCGAA TCTGGCCCAAACAGAGGCCGAACTGGCGCAAGCTCAACTCAACCTGCAAGACACCATACTGCTTGCCCCATCAGCCGGTA CGGTACTGACCCGTGCAGTAGAACCGGGCACCATTTTATCGGCCAGCAATACCGTCTTTACCGTTTCACTGACCGACCCG GTCTGGGTTCGAGCCTATGTCAGTGAACGTCATTTAGGCCAGGCGATCCCCGGTTCAGAGGTTGAAGTCTTTACCGATGG CCGCCCCGATAAGCCCTATCACGGCAAAATTGGTTTTGTTTCACCAACGGCAGAATTCACGCCAAAAACAGTGGAAACAC CGGATTTACGCACCGACCTGGTTTATCGCTTACGCATTATTATCACGGATGCGGATGAATCATTGCGACAAGGTATGCCC GTCACTGTTCGTTTTCCCCAACGTTAA
Upstream 100 bases:
>100_bases ACATATTGATCTGCTTCTTAACGGACTCCGGGCCAAGGCAACCTTATGACCTCTCGCCCATTTTCATTGTGATAAAAACC AGTGGTAGACAGGAAACATT
Downstream 100 bases:
>100_bases GGCAGCATGAGTTATGAATGGAATTCAACATATCATTACTCTGGAGGCGGTTGAAAAACGGTTCAGCGGACTGGATCACC CTGCGGTTGCCAGCCTGACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MNRKKIIVAAVIVALLATLAYGWHYYRQQNDASLTLYGNVDIRTVNLGFRVAGRLASLAVDEGDDIHPGQTLGKLDDGPY LNALKQAQANVQSAQAQLALLKAGYREEEIAQVRSEVAQRQAAFDYADNFLKRQQGLWASKAVSANELENARTARNQARA NLQAAKDKLAQFLSGNRPQEIAQAEANLAQTEAELAQAQLNLQDTILLAPSAGTVLTRAVEPGTILSASNTVFTVSLTDP VWVRAYVSERHLGQAIPGSEVEVFTDGRPDKPYHGKIGFVSPTAEFTPKTVETPDLRTDLVYRLRIIITDADESLRQGMP VTVRFPQR
Sequences:
>Translated_328_residues MNRKKIIVAAVIVALLATLAYGWHYYRQQNDASLTLYGNVDIRTVNLGFRVAGRLASLAVDEGDDIHPGQTLGKLDDGPY LNALKQAQANVQSAQAQLALLKAGYREEEIAQVRSEVAQRQAAFDYADNFLKRQQGLWASKAVSANELENARTARNQARA NLQAAKDKLAQFLSGNRPQEIAQAEANLAQTEAELAQAQLNLQDTILLAPSAGTVLTRAVEPGTILSASNTVFTVSLTDP VWVRAYVSERHLGQAIPGSEVEVFTDGRPDKPYHGKIGFVSPTAEFTPKTVETPDLRTDLVYRLRIIITDADESLRQGMP VTVRFPQR >Mature_328_residues MNRKKIIVAAVIVALLATLAYGWHYYRQQNDASLTLYGNVDIRTVNLGFRVAGRLASLAVDEGDDIHPGQTLGKLDDGPY LNALKQAQANVQSAQAQLALLKAGYREEEIAQVRSEVAQRQAAFDYADNFLKRQQGLWASKAVSANELENARTARNQARA NLQAAKDKLAQFLSGNRPQEIAQAEANLAQTEAELAQAQLNLQDTILLAPSAGTVLTRAVEPGTILSASNTVFTVSLTDP VWVRAYVSERHLGQAIPGSEVEVFTDGRPDKPYHGKIGFVSPTAEFTPKTVETPDLRTDLVYRLRIIITDADESLRQGMP VTVRFPQR
Specific function: Unknown
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0194 family [H]
Homologues:
Organism=Escherichia coli, GI1787013, Length=325, Percent_Identity=66.7692307692308, Blast_Score=401, Evalue=1e-113, Organism=Escherichia coli, GI1789900, Length=318, Percent_Identity=32.0754716981132, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI87081796, Length=297, Percent_Identity=26.5993265993266, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1790519, Length=253, Percent_Identity=27.2727272727273, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 - InterPro: IPR022936 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 35951; Mature: 35951
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRKKIIVAAVIVALLATLAYGWHYYRQQNDASLTLYGNVDIRTVNLGFRVAGRLASLAV CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECEEEEEEEECHHHHHHHHHHEE DEGDDIHPGQTLGKLDDGPYLNALKQAQANVQSAQAQLALLKAGYREEEIAQVRSEVAQR CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH QAAFDYADNFLKRQQGLWASKAVSANELENARTARNQARANLQAAKDKLAQFLSGNRPQE HHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH IAQAEANLAQTEAELAQAQLNLQDTILLAPSAGTVLTRAVEPGTILSASNTVFTVSLTDP HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCEEEECCCEEEEEEECCC VWVRAYVSERHLGQAIPGSEVEVFTDGRPDKPYHGKIGFVSPTAEFTPKTVETPDLRTDL CEEHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHH VYRLRIIITDADESLRQGMPVTVRFPQR EEEEEEEEECCCHHHHCCCCEEEECCCC >Mature Secondary Structure MNRKKIIVAAVIVALLATLAYGWHYYRQQNDASLTLYGNVDIRTVNLGFRVAGRLASLAV CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECEEEEEEEECHHHHHHHHHHEE DEGDDIHPGQTLGKLDDGPYLNALKQAQANVQSAQAQLALLKAGYREEEIAQVRSEVAQR CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH QAAFDYADNFLKRQQGLWASKAVSANELENARTARNQARANLQAAKDKLAQFLSGNRPQE HHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH IAQAEANLAQTEAELAQAQLNLQDTILLAPSAGTVLTRAVEPGTILSASNTVFTVSLTDP HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCEEEECCCEEEEEEECCC VWVRAYVSERHLGQAIPGSEVEVFTDGRPDKPYHGKIGFVSPTAEFTPKTVETPDLRTDL CEEHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHH VYRLRIIITDADESLRQGMPVTVRFPQR EEEEEEEEECCCHHHHCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA