Click here to switch to the map view.

The map label for this gene is ybhL [H]

Identifier: 51595538

GI number: 51595538

Start: 1421939

End: 1422649

Strand: Direct

Name: ybhL [H]

Synonym: YPTB1194

Alternate gene names: 51595538

Gene position: 1421939-1422649 (Clockwise)

Preceding gene: 51595537

Following gene: 51595542

Centisome position: 29.97

GC content: 47.54

Gene sequence:

>711_bases
ATGGATCGCTATCCACGCTCTAATGGTTCGATTGTCGAACGTGCCGGCTCAGGCATTCAGGCCTATATGGCGCAGGTATA
CGGTTGGATGACCTGTGGCTTGTTATTAACCGCAGTTGTCGCTTGGTATGCCGCGAACACTCCTTCAATCATTTTTGCTT
TGCAATCAAACCAAATATTGTTCTTTGGCTTGATTATTGCCCAGCTTGGTCTGGTTTTTGTTATTTCCGGTATGGTTAAC
CGCCTGAGTGGAACCGCAGCAACATCACTGTTTATGCTGTATTCCGCGCTGACCGGCCTCACCCTTTCCAGCATATTGAT
AATGTACACGGGCGCGTCTATCGCCAGTACTTTCGTTATTTGTGCCGGGATGTTTGGCGCCATGAGCTTCTATGGTTACA
CCACCAAACGTGATCTGAGCGGTATGGGCAGCATGTTGTTTATGGGCCTGATCGGTATCATTCTGGCATCTCTTGTTAAC
ATCTGGCTGAAAAGCCCAGCGTTGATGTGGGCTGTGACCTATATCGGTGTGCTCGTGTTTGTGGGCCTGACTGCCTACGA
CACACAGAAACTGAAAAACTTGGGCGCACAGTTGGATGTCAATGATAAAGATTCATTCCGCAAATACTCCATTGTGGGCG
CACTGACTCTGTATCTCGATTTCATTAACCTGTTCTTGATGTTATTACGAATCTTCGGTAATCGTCGCTAA

Upstream 100 bases:

>100_bases
TTTTACTCCTTTGTTTCCGCTATTTCTATGGTACCCTTAAAAAGACGGTGGGCTGTCAGTCGATAGCCTGTATTTATTAT
TTAATACAAAGGTAACTACC

Downstream 100 bases:

>100_bases
GCGGGTTGATTAAACGCTATGGCGCGGTAAGTTTGCCCACCGACATGGTTTGAGATAGTAAAGGACACCAAAATCTGGTG
TCCTTTTTGTTTTTCTTTCA

Product: stationary phase anti-death family (SAD), acetate uptake

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MDRYPRSNGSIVERAGSGIQAYMAQVYGWMTCGLLLTAVVAWYAANTPSIIFALQSNQILFFGLIIAQLGLVFVISGMVN
RLSGTAATSLFMLYSALTGLTLSSILIMYTGASIASTFVICAGMFGAMSFYGYTTKRDLSGMGSMLFMGLIGIILASLVN
IWLKSPALMWAVTYIGVLVFVGLTAYDTQKLKNLGAQLDVNDKDSFRKYSIVGALTLYLDFINLFLMLLRIFGNRR

Sequences:

>Translated_236_residues
MDRYPRSNGSIVERAGSGIQAYMAQVYGWMTCGLLLTAVVAWYAANTPSIIFALQSNQILFFGLIIAQLGLVFVISGMVN
RLSGTAATSLFMLYSALTGLTLSSILIMYTGASIASTFVICAGMFGAMSFYGYTTKRDLSGMGSMLFMGLIGIILASLVN
IWLKSPALMWAVTYIGVLVFVGLTAYDTQKLKNLGAQLDVNDKDSFRKYSIVGALTLYLDFINLFLMLLRIFGNRR
>Mature_236_residues
MDRYPRSNGSIVERAGSGIQAYMAQVYGWMTCGLLLTAVVAWYAANTPSIIFALQSNQILFFGLIIAQLGLVFVISGMVN
RLSGTAATSLFMLYSALTGLTLSSILIMYTGASIASTFVICAGMFGAMSFYGYTTKRDLSGMGSMLFMGLIGIILASLVN
IWLKSPALMWAVTYIGVLVFVGLTAYDTQKLKNLGAQLDVNDKDSFRKYSIVGALTLYLDFINLFLMLLRIFGNRR

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Homo sapiens, GI116812579, Length=236, Percent_Identity=28.3898305084746, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI1787004, Length=236, Percent_Identity=73.728813559322, Blast_Score=347, Evalue=4e-97,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 25750; Mature: 25750

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRYPRSNGSIVERAGSGIQAYMAQVYGWMTCGLLLTAVVAWYAANTPSIIFALQSNQIL
CCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCH
FFGLIIAQLGLVFVISGMVNRLSGTAATSLFMLYSALTGLTLSSILIMYTGASIASTFVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
CAGMFGAMSFYGYTTKRDLSGMGSMLFMGLIGIILASLVNIWLKSPALMWAVTYIGVLVF
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
VGLTAYDTQKLKNLGAQLDVNDKDSFRKYSIVGALTLYLDFINLFLMLLRIFGNRR
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDRYPRSNGSIVERAGSGIQAYMAQVYGWMTCGLLLTAVVAWYAANTPSIIFALQSNQIL
CCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCH
FFGLIIAQLGLVFVISGMVNRLSGTAATSLFMLYSALTGLTLSSILIMYTGASIASTFVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
CAGMFGAMSFYGYTTKRDLSGMGSMLFMGLIGIILASLVNIWLKSPALMWAVTYIGVLVF
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
VGLTAYDTQKLKNLGAQLDVNDKDSFRKYSIVGALTLYLDFINLFLMLLRIFGNRR
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]