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The map label for this gene is pbpA

Identifier: 51595444

GI number: 51595444

Start: 1314530

End: 1316425

Strand: Reverse

Name: pbpA

Synonym: YPTB1097

Alternate gene names: 51595444

Gene position: 1316425-1314530 (Counterclockwise)

Preceding gene: 51595445

Following gene: 51595443

Centisome position: 27.75

GC content: 49.26

Gene sequence:

>1896_bases
ATGAAAAAAGAACCTAACCCTTTTCGCGACTATTCGGCTGAATCAGCCCTGTTTGTCCGCCGCGCCGTAGTGGCTTTTCT
GGGTATCCTGCTACTGAGCGGGGTACTGGTTGCTAACCTCTATAATTTGCAAATAGTCCGTTTCGACGATTACAGCACCC
GCTCCAACGACAACCGCATCAAACTGGTTCCTATCGCCCCTAGCCGTGGCATGATATTTGACAGAAATGGCACACCACTG
GCATTAAACCGCACCATCTATCAATTAGAGTTGATGCCGGAAAAGATCGAAAACTTGTCAGCCACCCTCAATGCGCTGCG
CCCAATAGTGGATCTGACTGACGACGATATCGCTAACTTTGAAAAAGAGCGCAAACGCTCACGTCGCTTTACCTCTATTG
CCGTTAAAACACCGTTGACCGAGGTGCAAGTCGCCCGTTTTGCAGTGAATCAATTCCGCTTCCCCGGAATTGAAGTCAAA
GGCTATCAACGTCGCTTCTACCCGTATGGCTCCGCCCTGACCCACGTGATTGGCTATGTCTCTAAAATTAACGATAAAGA
TGTCGAACGGTTGGATAAAGAAGGCATTCTTCCCAATTATGCTGCGACCCACGATATCGGTAAGTTGGGTATTGAACGCT
ATTATGAATCCACCTTACATGGCAAAACTGGTTATGAAGAAGTTGAAGTCAATAACCGAGGCCGGGTAATCCGCCAATTA
CATGAGCAACCGCCACAAGCAGGTAAAGATATTTATCTGACTCTCGATCTGAGTCTACAAATCTATATCGAGAAGTTACT
CAGTGGCAGCCGTGCTGCGGTCGTCGTCACAGACCCACGCACCGGCGGGATCCTTGCCTTGGTATCAAACCCAAGCTATG
ACCCGAACCTGTTTGTCGACGGCATCTCCAACAAAGATTATCAAGGGTTGCTTAACGATACGAACCGCCCCTTAATCAAT
CGGGCAACCCAAGGCGTTTATCCACCGGCATCAACCGTGAAACCGTACATCGCAGTGTCAGCACTGAGTGCCGGGGTTAT
CACCAAAAACACCAGCCTGTTCGATCCTGGTTGGTGGCAACTGCCCGGTTCGGAAAAGCGCTACCGTGACTGGAAAAAAT
GGGGCCATGGCCGCCTGAACGTCACCAAAGCACTGGAAGAATCGGCAGATACCTTCTTCTACCAAGTCGCCTATGATATG
GGCATTGATCGCTTATCATCTTGGATGAGCAAATTCGGGTACGGTGAATATACTGGCATTGATTTATCCGAAGAGCGTGC
GGGTTTAATGCCAACACGCGAGTGGAAGCAAAAGCGCCATAAAAAGCCTTGGTATCAGGGTGATACCATTCCGGTAGGTA
TTGGCCAGGGTTATTGGACTGCGACGCCAATCCAGATGGCTAAAGCCTTAATGACCCTGATTAATGATGGCACAGTCAAG
ACACCTCACCTGTTGCAAAGCACCCGGATTGATGGCGTCTTAGTGCCTTATAAGCAGGAAGACAGTATGCAGATTGGGAG
TATCAATTCTGGCTATTGGGAAATTGCTAAAGACGGCATGTATGGCGTAGCGAACCGCCCAAACGGTACTGGCCGCAAGT
TTTTTGAAGGTACACCTTATAAGGCAGCGGCGAAATCGGGTACCGCACAGGTTTACAGTTATGAAACCTATAATGCCAGT
AAAGTGGCAGAACACCTGCGCGACCATAAGTTAATGGTTGCGTTTGCTCCCTATGAGAACCCTACGGTATCCGTTGCAAT
AATCTTGGAAAATGGAGGCGCGGGGCCTGCGGTAGGGACCATTACCCGTCAGATCCTCGACCATATCTTGTTGGGCGATA
ATAATACTGAATTACCGGATGCGGTTCCTCTGCCTCCTGGCGTTGAAGCAGATTAG

Upstream 100 bases:

>100_bases
TCCTTATCACCGGGAATAAACGGGCGATGAAACTGAATCAAGTGATGGCTCTGGCTCTGAGTAAGATGCTGGTTTTGAGC
AAAATGACGTAAGCTGCGGA

Downstream 100 bases:

>100_bases
TTGAAACAGATTAGTTGAAGCAGACTAAAAGCAAACTAATCGTTGATGCCCGTTGAGTTGAAATAGGTCGCATTGAAGCC
GATCACGTTAAGACAGGTTA

Product: penicillin-binding protein 2

Products: NA

Alternate protein names: PBP-2 [H]

Number of amino acids: Translated: 631; Mature: 631

Protein sequence:

>631_residues
MKKEPNPFRDYSAESALFVRRAVVAFLGILLLSGVLVANLYNLQIVRFDDYSTRSNDNRIKLVPIAPSRGMIFDRNGTPL
ALNRTIYQLELMPEKIENLSATLNALRPIVDLTDDDIANFEKERKRSRRFTSIAVKTPLTEVQVARFAVNQFRFPGIEVK
GYQRRFYPYGSALTHVIGYVSKINDKDVERLDKEGILPNYAATHDIGKLGIERYYESTLHGKTGYEEVEVNNRGRVIRQL
HEQPPQAGKDIYLTLDLSLQIYIEKLLSGSRAAVVVTDPRTGGILALVSNPSYDPNLFVDGISNKDYQGLLNDTNRPLIN
RATQGVYPPASTVKPYIAVSALSAGVITKNTSLFDPGWWQLPGSEKRYRDWKKWGHGRLNVTKALEESADTFFYQVAYDM
GIDRLSSWMSKFGYGEYTGIDLSEERAGLMPTREWKQKRHKKPWYQGDTIPVGIGQGYWTATPIQMAKALMTLINDGTVK
TPHLLQSTRIDGVLVPYKQEDSMQIGSINSGYWEIAKDGMYGVANRPNGTGRKFFEGTPYKAAAKSGTAQVYSYETYNAS
KVAEHLRDHKLMVAFAPYENPTVSVAIILENGGAGPAVGTITRQILDHILLGDNNTELPDAVPLPPGVEAD

Sequences:

>Translated_631_residues
MKKEPNPFRDYSAESALFVRRAVVAFLGILLLSGVLVANLYNLQIVRFDDYSTRSNDNRIKLVPIAPSRGMIFDRNGTPL
ALNRTIYQLELMPEKIENLSATLNALRPIVDLTDDDIANFEKERKRSRRFTSIAVKTPLTEVQVARFAVNQFRFPGIEVK
GYQRRFYPYGSALTHVIGYVSKINDKDVERLDKEGILPNYAATHDIGKLGIERYYESTLHGKTGYEEVEVNNRGRVIRQL
HEQPPQAGKDIYLTLDLSLQIYIEKLLSGSRAAVVVTDPRTGGILALVSNPSYDPNLFVDGISNKDYQGLLNDTNRPLIN
RATQGVYPPASTVKPYIAVSALSAGVITKNTSLFDPGWWQLPGSEKRYRDWKKWGHGRLNVTKALEESADTFFYQVAYDM
GIDRLSSWMSKFGYGEYTGIDLSEERAGLMPTREWKQKRHKKPWYQGDTIPVGIGQGYWTATPIQMAKALMTLINDGTVK
TPHLLQSTRIDGVLVPYKQEDSMQIGSINSGYWEIAKDGMYGVANRPNGTGRKFFEGTPYKAAAKSGTAQVYSYETYNAS
KVAEHLRDHKLMVAFAPYENPTVSVAIILENGGAGPAVGTITRQILDHILLGDNNTELPDAVPLPPGVEAD
>Mature_631_residues
MKKEPNPFRDYSAESALFVRRAVVAFLGILLLSGVLVANLYNLQIVRFDDYSTRSNDNRIKLVPIAPSRGMIFDRNGTPL
ALNRTIYQLELMPEKIENLSATLNALRPIVDLTDDDIANFEKERKRSRRFTSIAVKTPLTEVQVARFAVNQFRFPGIEVK
GYQRRFYPYGSALTHVIGYVSKINDKDVERLDKEGILPNYAATHDIGKLGIERYYESTLHGKTGYEEVEVNNRGRVIRQL
HEQPPQAGKDIYLTLDLSLQIYIEKLLSGSRAAVVVTDPRTGGILALVSNPSYDPNLFVDGISNKDYQGLLNDTNRPLIN
RATQGVYPPASTVKPYIAVSALSAGVITKNTSLFDPGWWQLPGSEKRYRDWKKWGHGRLNVTKALEESADTFFYQVAYDM
GIDRLSSWMSKFGYGEYTGIDLSEERAGLMPTREWKQKRHKKPWYQGDTIPVGIGQGYWTATPIQMAKALMTLINDGTVK
TPHLLQSTRIDGVLVPYKQEDSMQIGSINSGYWEIAKDGMYGVANRPNGTGRKFFEGTPYKAAAKSGTAQVYSYETYNAS
KVAEHLRDHKLMVAFAPYENPTVSVAIILENGGAGPAVGTITRQILDHILLGDNNTELPDAVPLPPGVEAD

Specific function: Cell wall formation; PBP-2 is responsible for the determination of the rod shape of the cell. Its synthesize cross- linked peptidoglycan from the lipid intermediates [H]

COG id: COG0768

COG function: function code M; Cell division protein FtsI/penicillin-binding protein 2

Gene ontology:

Cell location: Cell inner membrane [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transpeptidase family [H]

Homologues:

Organism=Escherichia coli, GI1786854, Length=630, Percent_Identity=80.7936507936508, Blast_Score=1058, Evalue=0.0,
Organism=Escherichia coli, GI1786272, Length=496, Percent_Identity=25.8064516129032, Blast_Score=134, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR005311
- InterPro:   IPR001460
- InterPro:   IPR017790 [H]

Pfam domain/function: PF03717 PBP_dimer; PF00905 Transpeptidase [H]

EC number: NA

Molecular weight: Translated: 70560; Mature: 70560

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKEPNPFRDYSAESALFVRRAVVAFLGILLLSGVLVANLYNLQIVRFDDYSTRSNDNRI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCEE
KLVPIAPSRGMIFDRNGTPLALNRTIYQLELMPEKIENLSATLNALRPIVDLTDDDIANF
EEEEECCCCCEEECCCCCCEEECCEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHH
EKERKRSRRFTSIAVKTPLTEVQVARFAVNQFRFPGIEVKGYQRRFYPYGSALTHVIGYV
HHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCEEECCCHHHHHHHHHHH
SKINDKDVERLDKEGILPNYAATHDIGKLGIERYYESTLHGKTGYEEVEVNNRGRVIRQL
HHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHH
HEQPPQAGKDIYLTLDLSLQIYIEKLLSGSRAAVVVTDPRTGGILALVSNPSYDPNLFVD
HHCCCCCCCEEEEEEECHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCCCCCEEEE
GISNKDYQGLLNDTNRPLINRATQGVYPPASTVKPYIAVSALSAGVITKNTSLFDPGWWQ
CCCCCCCHHHHCCCCCCHHHHHHCCCCCCHHHCCHHHEEHHHHCCEEECCCCCCCCCCEE
LPGSEKRYRDWKKWGHGRLNVTKALEESADTFFYQVAYDMGIDRLSSWMSKFGYGEYTGI
CCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHEEEEHHHHHCHHHHHHHHHHCCCCCCCCC
DLSEERAGLMPTREWKQKRHKKPWYQGDTIPVGIGQGYWTATPIQMAKALMTLINDGTVK
CCCHHCCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCC
TPHLLQSTRIDGVLVPYKQEDSMQIGSINSGYWEIAKDGMYGVANRPNGTGRKFFEGTPY
CCHHHHHCCCCEEEECCCCCCCEEECCCCCCCCEEECCCCEECCCCCCCCCCCCCCCCCC
KAAAKSGTAQVYSYETYNASKVAEHLRDHKLMVAFAPYENPTVSVAIILENGGAGPAVGT
HHHCCCCCEEEEEEECCCHHHHHHHHHCCEEEEEECCCCCCEEEEEEEEECCCCCCHHHH
ITRQILDHILLGDNNTELPDAVPLPPGVEAD
HHHHHHHHHEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKEPNPFRDYSAESALFVRRAVVAFLGILLLSGVLVANLYNLQIVRFDDYSTRSNDNRI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCEE
KLVPIAPSRGMIFDRNGTPLALNRTIYQLELMPEKIENLSATLNALRPIVDLTDDDIANF
EEEEECCCCCEEECCCCCCEEECCEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHH
EKERKRSRRFTSIAVKTPLTEVQVARFAVNQFRFPGIEVKGYQRRFYPYGSALTHVIGYV
HHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCEEECCCHHHHHHHHHHH
SKINDKDVERLDKEGILPNYAATHDIGKLGIERYYESTLHGKTGYEEVEVNNRGRVIRQL
HHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHH
HEQPPQAGKDIYLTLDLSLQIYIEKLLSGSRAAVVVTDPRTGGILALVSNPSYDPNLFVD
HHCCCCCCCEEEEEEECHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCCCCCEEEE
GISNKDYQGLLNDTNRPLINRATQGVYPPASTVKPYIAVSALSAGVITKNTSLFDPGWWQ
CCCCCCCHHHHCCCCCCHHHHHHCCCCCCHHHCCHHHEEHHHHCCEEECCCCCCCCCCEE
LPGSEKRYRDWKKWGHGRLNVTKALEESADTFFYQVAYDMGIDRLSSWMSKFGYGEYTGI
CCCCCHHHHHHHHHCCCCEEHHHHHHHHHHHEEEEHHHHHCHHHHHHHHHHCCCCCCCCC
DLSEERAGLMPTREWKQKRHKKPWYQGDTIPVGIGQGYWTATPIQMAKALMTLINDGTVK
CCCHHCCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCC
TPHLLQSTRIDGVLVPYKQEDSMQIGSINSGYWEIAKDGMYGVANRPNGTGRKFFEGTPY
CCHHHHHCCCCEEEECCCCCCCEEECCCCCCCCEEECCCCEECCCCCCCCCCCCCCCCCC
KAAAKSGTAQVYSYETYNASKVAEHLRDHKLMVAFAPYENPTVSVAIILENGGAGPAVGT
HHHCCCCCEEEEEEECCCHHHHHHHHHCCEEEEEECCCCCCEEEEEEEEECCCCCCHHHH
ITRQILDHILLGDNNTELPDAVPLPPGVEAD
HHHHHHHHHEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]