| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51595389
Identifier: 51595389
GI number: 51595389
Start: 1246106
End: 1246753
Strand: Reverse
Name: 51595389
Synonym: YPTB1040
Alternate gene names: NA
Gene position: 1246753-1246106 (Counterclockwise)
Preceding gene: 51595390
Following gene: 51595388
Centisome position: 26.28
GC content: 42.28
Gene sequence:
>648_bases ATGTCACCCAATTTAATTGCTGAACACGATAAAATATTAAAATGGCCGGAAGTTAATGATTTAGCTTCCGGCCATTTTTT ATGGCTCCCTGAATTTAAAACCCCGAGTGGTGACCTCTTTCAAGCATTACTTGAAGATGATGGTAGCAATATGGCCCATA TTCATATCAAAGAGAGACTTTCAGGTGAGCATATAGCAAGCTATGTTTTGACTTTCGACCTCACCCCACCACTGGATTTA GGCCAACGTTTACCCCAAGTTGAATCAGCTTATGTCTCACAAGAATATCAAGGCGGGGGCGTGTCTACTGCCACCTATAA AGCCATTATTGACCACTACGGTGCTGTAATAAGTGATACTTATCAGACTGAGGGCGGGATGGTGCTTTGGCTGTTTGGTC TATCTAAAGATGACAGCGTCCAGTTAACCATTCTAAATGTGGATGGTCATACGTTGGATTATAAAATTAACGAACACGGC GAAAGGATCAGTTTTCAGGCAGATAGAAAGTCTTTACTGGAAATTGCCGATACGGTTTGGGGAAACCCGGATAATGTCGA ACTGAGTAATCTGGAGACGTTGGGCTTTACACCATCCTGGCGTAATCACAGCAATCACGTTTTAGCCGCAACTAAATCTA TTATCTAA
Upstream 100 bases:
>100_bases TTAACCAAGCTTTTTTCTGGAATGATTTGCAGGATACCTCTATCGATTTCTCACAAAAGGCGGTTGATTTGTTCTTCAGT AAGAAAGGAACTCTATCTGC
Downstream 100 bases:
>100_bases ATCCCCTGATGGCTCCCCATAAATAAAGACAGACATATAGGATCGTGATCTACTTAGTGTTCCAGCAAAAAGTAAGGTCA GTTAAAAGGAAGGAGAAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MSPNLIAEHDKILKWPEVNDLASGHFLWLPEFKTPSGDLFQALLEDDGSNMAHIHIKERLSGEHIASYVLTFDLTPPLDL GQRLPQVESAYVSQEYQGGGVSTATYKAIIDHYGAVISDTYQTEGGMVLWLFGLSKDDSVQLTILNVDGHTLDYKINEHG ERISFQADRKSLLEIADTVWGNPDNVELSNLETLGFTPSWRNHSNHVLAATKSII
Sequences:
>Translated_215_residues MSPNLIAEHDKILKWPEVNDLASGHFLWLPEFKTPSGDLFQALLEDDGSNMAHIHIKERLSGEHIASYVLTFDLTPPLDL GQRLPQVESAYVSQEYQGGGVSTATYKAIIDHYGAVISDTYQTEGGMVLWLFGLSKDDSVQLTILNVDGHTLDYKINEHG ERISFQADRKSLLEIADTVWGNPDNVELSNLETLGFTPSWRNHSNHVLAATKSII >Mature_214_residues SPNLIAEHDKILKWPEVNDLASGHFLWLPEFKTPSGDLFQALLEDDGSNMAHIHIKERLSGEHIASYVLTFDLTPPLDLG QRLPQVESAYVSQEYQGGGVSTATYKAIIDHYGAVISDTYQTEGGMVLWLFGLSKDDSVQLTILNVDGHTLDYKINEHGE RISFQADRKSLLEIADTVWGNPDNVELSNLETLGFTPSWRNHSNHVLAATKSII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23945; Mature: 23814
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPNLIAEHDKILKWPEVNDLASGHFLWLPEFKTPSGDLFQALLEDDGSNMAHIHIKERL CCCCCCCCCCCEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEHHHC SGEHIASYVLTFDLTPPLDLGQRLPQVESAYVSQEYQGGGVSTATYKAIIDHYGAVISDT CHHHEEEEEEEEECCCCHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC YQTEGGMVLWLFGLSKDDSVQLTILNVDGHTLDYKINEHGERISFQADRKSLLEIADTVW EECCCCEEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHC GNPDNVELSNLETLGFTPSWRNHSNHVLAATKSII CCCCCEEECCEEEECCCCCCCCCCCEEEEEEECCC >Mature Secondary Structure SPNLIAEHDKILKWPEVNDLASGHFLWLPEFKTPSGDLFQALLEDDGSNMAHIHIKERL CCCCCCCCCCEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEHHHC SGEHIASYVLTFDLTPPLDLGQRLPQVESAYVSQEYQGGGVSTATYKAIIDHYGAVISDT CHHHEEEEEEEEECCCCHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC YQTEGGMVLWLFGLSKDDSVQLTILNVDGHTLDYKINEHGERISFQADRKSLLEIADTVW EECCCCEEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHC GNPDNVELSNLETLGFTPSWRNHSNHVLAATKSII CCCCCEEECCEEEECCCCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA