| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is rosA
Identifier: 51595367
GI number: 51595367
Start: 1222003
End: 1223217
Strand: Reverse
Name: rosA
Synonym: YPTB1017
Alternate gene names: 51595367
Gene position: 1223217-1222003 (Counterclockwise)
Preceding gene: 51595368
Following gene: 51595366
Centisome position: 25.78
GC content: 45.43
Gene sequence:
>1215_bases ATGACCGATCGTTCTGATACCGGATGTCAGCAGCCCGTTAATGTTTCAGTCAAACGTACATCTTTCTCTATTTTGGGTGC TATCAGCGTATCTCACCTACTCAACGATATGATCCAGTCGCTGATCCTGGCGATTTATCCTTTATTACAAGCTGAGTTCT CATTGAGTTTTGCTCAAATAGGATTGATCACGCTAACTTACCAATTGACGGCTTCGTTACTACAACCGCTGATTGGCTTA TATACGGATAAACACCCCCAGCCATACTCATTACCCATCGGTATGGGGTTCACGCTGTCTGGCATATTACTGCTGGCAGT AGCCACAACCTTCCCGGTGGTATTATTAGCGGCAGCATTGGTCGGTACTGGCTCTTCTGTCTTCCACCCAGAATCATCAC GAGTCGCCCGTATGGCATCCGGTGGGCGCCATGGTTTGGCTCAATCTGTGTTTCAGGTGGGGGGGAATTTTGGCAGCGCA CTCGGTCCGTTACTGGCCGCCATCATTATTGCCCCTTACGGTAAAGGCAATGTGGGCTGGTTTTCGCTCGCAGCCCTACT GGCAATTGTCGTGCTGTTGCAGGTGAGTAAATGGTACAAACTGCAGCAACGTGCTTCGTATGGCAAAGTGTTAAAAATCT CATCAGCCAAAACACTACCAAAAAATAAAATTATCAGTACGTTAGCCATCCTGATGGTGCTGATATTCTCTAAATACTTC TATTTGACCAGCATTAGTAGCTATTACACCTTTTATTTAATACATAAGTTTGGCGTTTCGGTACAAAGTGCCCAGATACA CCTATTTGTTTTCTTATTTGCGGTTGCCGCCGGCACCATTATTGGTGGGCCTCTTGGTGATAAGATTGGTAGAAAATATG TTATTTGGGGTTCTATACTCGGTGTTGCCCCTTTGACCCTTGCTTTACCCTACGCGTCTTTGTATTGGACGGGTATTTTA ACCGTATTTATTGGTGTTATTCTCGCTTCCGCCTTTTCAGCAATACTGGTGTATGCTCAAGAGCTTATCCCAGGGAAAGT CGGCATGGTATCGGGTTTATTCTTCGGTTTCGCTTTCGGTATGGGGGGAATAGGTGCAGCAGTACTGGGGTATGTTGCTG ATTTAACCAGTATTGAACTGGTTTATCAAATATGTGCGTTCTTGCCATTACTGGGAATATTCACGGCCTTACTGCCTAAT TTGGACGATAAGTAA
Upstream 100 bases:
>100_bases ATCAAATCGTTCATATGTAGTAAAAATCATACAATATGCCTAGTATGTATTCATTATCAAAATAGCATTAACATTCAAAA TTATTAGGTGAATACTCACT
Downstream 100 bases:
>100_bases TAGTAATAGCGCTATCGCCCTGACTGAAATGTCTATTTTGGTCAGGAGCCTCCCCTATGTAAGCTCGATATAAATAGCAA TTCCTCCACAAACAACCACT
Product: MFS cationic anti peptides (CAMPs) efflux/K+ antiporter, rosA subunit
Products: fosmidomycin [Periplasm]; Proton [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MTDRSDTGCQQPVNVSVKRTSFSILGAISVSHLLNDMIQSLILAIYPLLQAEFSLSFAQIGLITLTYQLTASLLQPLIGL YTDKHPQPYSLPIGMGFTLSGILLLAVATTFPVVLLAAALVGTGSSVFHPESSRVARMASGGRHGLAQSVFQVGGNFGSA LGPLLAAIIIAPYGKGNVGWFSLAALLAIVVLLQVSKWYKLQQRASYGKVLKISSAKTLPKNKIISTLAILMVLIFSKYF YLTSISSYYTFYLIHKFGVSVQSAQIHLFVFLFAVAAGTIIGGPLGDKIGRKYVIWGSILGVAPLTLALPYASLYWTGIL TVFIGVILASAFSAILVYAQELIPGKVGMVSGLFFGFAFGMGGIGAAVLGYVADLTSIELVYQICAFLPLLGIFTALLPN LDDK
Sequences:
>Translated_404_residues MTDRSDTGCQQPVNVSVKRTSFSILGAISVSHLLNDMIQSLILAIYPLLQAEFSLSFAQIGLITLTYQLTASLLQPLIGL YTDKHPQPYSLPIGMGFTLSGILLLAVATTFPVVLLAAALVGTGSSVFHPESSRVARMASGGRHGLAQSVFQVGGNFGSA LGPLLAAIIIAPYGKGNVGWFSLAALLAIVVLLQVSKWYKLQQRASYGKVLKISSAKTLPKNKIISTLAILMVLIFSKYF YLTSISSYYTFYLIHKFGVSVQSAQIHLFVFLFAVAAGTIIGGPLGDKIGRKYVIWGSILGVAPLTLALPYASLYWTGIL TVFIGVILASAFSAILVYAQELIPGKVGMVSGLFFGFAFGMGGIGAAVLGYVADLTSIELVYQICAFLPLLGIFTALLPN LDDK >Mature_403_residues TDRSDTGCQQPVNVSVKRTSFSILGAISVSHLLNDMIQSLILAIYPLLQAEFSLSFAQIGLITLTYQLTASLLQPLIGLY TDKHPQPYSLPIGMGFTLSGILLLAVATTFPVVLLAAALVGTGSSVFHPESSRVARMASGGRHGLAQSVFQVGGNFGSAL GPLLAAIIIAPYGKGNVGWFSLAALLAIVVLLQVSKWYKLQQRASYGKVLKISSAKTLPKNKIISTLAILMVLIFSKYFY LTSISSYYTFYLIHKFGVSVQSAQIHLFVFLFAVAAGTIIGGPLGDKIGRKYVIWGSILGVAPLTLALPYASLYWTGILT VFIGVILASAFSAILVYAQELIPGKVGMVSGLFFGFAFGMGGIGAAVLGYVADLTSIELVYQICAFLPLLGIFTALLPNL DDK
Specific function: Confers the resistance against fosmidomycin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1786686, Length=404, Percent_Identity=74.009900990099, Blast_Score=566, Evalue=1e-163,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43008; Mature: 42876
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRSDTGCQQPVNVSVKRTSFSILGAISVSHLLNDMIQSLILAIYPLLQAEFSLSFAQI CCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLITLTYQLTASLLQPLIGLYTDKHPQPYSLPIGMGFTLSGILLLAVATTFPVVLLAAAL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VGTGSSVFHPESSRVARMASGGRHGLAQSVFQVGGNFGSALGPLLAAIIIAPYGKGNVGW HCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHH FSLAALLAIVVLLQVSKWYKLQQRASYGKVLKISSAKTLPKNKIISTLAILMVLIFSKYF HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH YLTSISSYYTFYLIHKFGVSVQSAQIHLFVFLFAVAAGTIIGGPLGDKIGRKYVIWGSIL HHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHCCCCCHHHHCCEEEEEHHHH GVAPLTLALPYASLYWTGILTVFIGVILASAFSAILVYAQELIPGKVGMVSGLFFGFAFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC MGGIGAAVLGYVADLTSIELVYQICAFLPLLGIFTALLPNLDDK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TDRSDTGCQQPVNVSVKRTSFSILGAISVSHLLNDMIQSLILAIYPLLQAEFSLSFAQI CCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLITLTYQLTASLLQPLIGLYTDKHPQPYSLPIGMGFTLSGILLLAVATTFPVVLLAAAL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VGTGSSVFHPESSRVARMASGGRHGLAQSVFQVGGNFGSALGPLLAAIIIAPYGKGNVGW HCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHH FSLAALLAIVVLLQVSKWYKLQQRASYGKVLKISSAKTLPKNKIISTLAILMVLIFSKYF HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH YLTSISSYYTFYLIHKFGVSVQSAQIHLFVFLFAVAAGTIIGGPLGDKIGRKYVIWGSIL HHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHCCCCCHHHHCCEEEEEHHHH GVAPLTLALPYASLYWTGILTVFIGVILASAFSAILVYAQELIPGKVGMVSGLFFGFAFG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC MGGIGAAVLGYVADLTSIELVYQICAFLPLLGIFTALLPNLDDK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: fosmidomycin [Cytoplasm]; Proton [Periplasm] [C]
Specific reaction: fosmidomycin [Cytoplasm] + Proton [Periplasm] = fosmidomycin [Periplasm] + Proton [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8917080; 9278503 [H]