| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is ddhA
Identifier: 51595349
GI number: 51595349
Start: 1199878
End: 1200663
Strand: Direct
Name: ddhA
Synonym: YPTB0999
Alternate gene names: 51595349
Gene position: 1199878-1200663 (Clockwise)
Preceding gene: 51595348
Following gene: 51595350
Centisome position: 25.29
GC content: 43.64
Gene sequence:
>786_bases ATGGAGATTCAAGTGAAAGCAGTCATTTTGGCCGGAGGCCTTGGAACCCGTCTTAGTGAAGAGACCGTAGTAAAACCAAA ACCAATGGTAGAGATTGGTGGGAAGCCTATTCTCTGGCATATTATGAAACTTTACTCTTCTTATGGCATCAATGATTTCG TTATTTGCTGTGGTTATAAAGGCTATGTCATTAAAGAATATTTTGCGAATTACTTTATGCACATGTCGGATATTACCTTC TGCATGCGTGATAATGAAATGATAGTACACCAAAAGCGAGTCGAACCCTGGAATGTCACGTTAGTAGACACCGGCGAAGA TTCTATGACCGGTGGCCGACTGAGGCGTGTAAAAGATTACGTCAAAGACGATGAGGCTTTCTGTTTCACCTATGGTGATG GTGTGAGTGACGTCAATATTGCTGAATTAATTGCATTCCATAAGAGCCACGGCAAGCAAGCCACATTAACGGCAACCTAT CCCCCAGGCCGTTTTGGTGCGCTGGATATTAAAGATAAACAAGTACGTAGTTTTAAAGAAAAACCAAAAGGCGATGGCGC ATTGATCAACGGCGGTTATTTTGTTTTGTCGCCTAAAGTTATCGATCTGATCGATGGTGATAAGTCTACTTGGGAGCAGG AACCTTTAATGACATTAGCTGCGCAGGGGGAGTTGATGGCGTTTGAACATGCCGGTTTCTGGCAGCCAATGGATACGTTG CGTGACAAGATTTATCTGCATGAACTATGGGAAGAAGGCAGGGCACCTTGGAAGGTATGGGAATAA
Upstream 100 bases:
>100_bases GCTCGTAATGATTTCATCAATCATGGATTAGCTGAAAATAAATTTTTCTCTGATGCCTTTGTGCCATCAAAATAACTTTG AGAGATCAAAGTAATACGTA
Downstream 100 bases:
>100_bases CAAAATGATTAATAATAGTTTCTGGCAAGGTAAACGGGTTTTTGTAACAGGCCATACTGGGTTTAAAGGTGGCTGGTTGA GTTTATGGTTGCAAACCATG
Product: glucose-1-phosphate cytidylyltransferase
Products: NA
Alternate protein names: CDP-glucose pyrophosphorylase [H]
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MEIQVKAVILAGGLGTRLSEETVVKPKPMVEIGGKPILWHIMKLYSSYGINDFVICCGYKGYVIKEYFANYFMHMSDITF CMRDNEMIVHQKRVEPWNVTLVDTGEDSMTGGRLRRVKDYVKDDEAFCFTYGDGVSDVNIAELIAFHKSHGKQATLTATY PPGRFGALDIKDKQVRSFKEKPKGDGALINGGYFVLSPKVIDLIDGDKSTWEQEPLMTLAAQGELMAFEHAGFWQPMDTL RDKIYLHELWEEGRAPWKVWE
Sequences:
>Translated_261_residues MEIQVKAVILAGGLGTRLSEETVVKPKPMVEIGGKPILWHIMKLYSSYGINDFVICCGYKGYVIKEYFANYFMHMSDITF CMRDNEMIVHQKRVEPWNVTLVDTGEDSMTGGRLRRVKDYVKDDEAFCFTYGDGVSDVNIAELIAFHKSHGKQATLTATY PPGRFGALDIKDKQVRSFKEKPKGDGALINGGYFVLSPKVIDLIDGDKSTWEQEPLMTLAAQGELMAFEHAGFWQPMDTL RDKIYLHELWEEGRAPWKVWE >Mature_261_residues MEIQVKAVILAGGLGTRLSEETVVKPKPMVEIGGKPILWHIMKLYSSYGINDFVICCGYKGYVIKEYFANYFMHMSDITF CMRDNEMIVHQKRVEPWNVTLVDTGEDSMTGGRLRRVKDYVKDDEAFCFTYGDGVSDVNIAELIAFHKSHGKQATLTATY PPGRFGALDIKDKQVRSFKEKPKGDGALINGGYFVLSPKVIDLIDGDKSTWEQEPLMTLAAQGELMAFEHAGFWQPMDTL RDKIYLHELWEEGRAPWKVWE
Specific function: Involved in the biosynthesis of the tyvelose, a 3,6- dideoxyhexose found in the O-antigen of the surface lipopolysaccharides. It catalyzes the transfer of a CMP moiety from CTP to glucose 1-phosphate. This enzyme can utilize either CTP or UTP as the nucle
COG id: COG1208
COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-1-phosphate cytidylyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI11761621, Length=246, Percent_Identity=27.2357723577236, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI11761619, Length=246, Percent_Identity=27.2357723577236, Blast_Score=96, Evalue=4e-20, Organism=Caenorhabditis elegans, GI133931050, Length=248, Percent_Identity=30.241935483871, Blast_Score=110, Evalue=8e-25, Organism=Saccharomyces cerevisiae, GI6320148, Length=268, Percent_Identity=32.089552238806, Blast_Score=116, Evalue=4e-27, Organism=Drosophila melanogaster, GI21355443, Length=259, Percent_Identity=28.5714285714286, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI24644084, Length=259, Percent_Identity=28.5714285714286, Blast_Score=92, Evalue=4e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013446 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.33 [H]
Molecular weight: Translated: 29705; Mature: 29705
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIQVKAVILAGGLGTRLSEETVVKPKPMVEIGGKPILWHIMKLYSSYGINDFVICCGYK CEEEEEEEEEECCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCEEEEEECCC GYVIKEYFANYFMHMSDITFCMRDNEMIVHQKRVEPWNVTLVDTGEDSMTGGRLRRVKDY CHHHHHHHHHHHHHHCCEEEEEECCEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHH VKDDEAFCFTYGDGVSDVNIAELIAFHKSHGKQATLTATYPPGRFGALDIKDKQVRSFKE HCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCEECCCHHHHHHHHH KPKGDGALINGGYFVLSPKVIDLIDGDKSTWEQEPLMTLAAQGELMAFEHAGFWQPMDTL CCCCCCEEEECCEEEECCEEEEEECCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHH RDKIYLHELWEEGRAPWKVWE HHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MEIQVKAVILAGGLGTRLSEETVVKPKPMVEIGGKPILWHIMKLYSSYGINDFVICCGYK CEEEEEEEEEECCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCEEEEEECCC GYVIKEYFANYFMHMSDITFCMRDNEMIVHQKRVEPWNVTLVDTGEDSMTGGRLRRVKDY CHHHHHHHHHHHHHHCCEEEEEECCEEEEEECCCCCEEEEEEECCCCCCCCHHHHHHHHH VKDDEAFCFTYGDGVSDVNIAELIAFHKSHGKQATLTATYPPGRFGALDIKDKQVRSFKE HCCCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCEECCCHHHHHHHHH KPKGDGALINGGYFVLSPKVIDLIDGDKSTWEQEPLMTLAAQGELMAFEHAGFWQPMDTL CCCCCCEEEECCEEEECCEEEEEECCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHH RDKIYLHELWEEGRAPWKVWE HHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]