| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51595282
Identifier: 51595282
GI number: 51595282
Start: 1126421
End: 1127743
Strand: Direct
Name: 51595282
Synonym: YPTB0932
Alternate gene names: NA
Gene position: 1126421-1127743 (Clockwise)
Preceding gene: 51595281
Following gene: 51595283
Centisome position: 23.74
GC content: 36.51
Gene sequence:
>1323_bases ATGACTGTTAGTTATGTCGGGCGAGGAGAGTCACTTTCATGGGTATATGGAGTGGACAATGTGAATATACCAAATTCAGA TGTGGTCGATTCACCTTTTAATGACTTCACTCAATTTGATAATATGGATTTTTCGGCTAATTATAATTCTATTTTATCGA GAGAAAATAAATCGCTAATTACGTCATTTATAAGTGAATATAATGATAAGGTTAAGAGGTTAAGTGCAGATGAAAATTAT ATTTTAACTCAAAAATATATTTCATCACTGGATGAAATGTGTGAGGAAATAAATAAAAAATTACTTTATTGTCATGATAG TAAAGTATTAAAAAATGTTTTAGATTCGACGCTTCAAAAGCAAACTGAAATGAGTAAATACATAGTGTTACTGGAAGGTG TGCCTTATCGCATTGAACCAAGAGATATCGCAGCTGACATTACGAATGAACGAATAAATGGTGCTATAGAGTTATTGAAT TTTGTTGCCAAGGCTTACCCGAAAATAGCGAAGGAATCCGCTAAGTTGCAGCGATCCCGACCCCATGCCAATTGCAGTGT TGAGACGTTGAATGACTATTTAGAACAGTTAAAAAAAATATTGTCAGGCAAGAAACTACTCAGTAATAGAAGACAACGCT CTTCATCAATTCATTTTAAAGACGCATGGGGTGGCGGTGATAAGTCTGGACGAATAAATGCGCAAAAAAACGTAGAGATT AATAAGAAAATGGAAGGTATCTATATTGGATTCACTCAGCGAACGATAGAGAGTCAGACTGAAAATCAGTCTGTGGTTTT TAAATCATCAAAACATGAGATGGTAGAAAATAAATTAATCTATTTAGCCTCTTTAGCTAATGAGTTGAGTAAGCTAAATG ACTCTATTAGTGATGAGAATTTAAAATATTCTATAAATAAAGTGGTTGGTGAAGTCCTTGAGTTGAAATTGAAGAAAATT CAGAAAATGGCGAAAAGTTCGAAATGTAATTTTTCATTTTCTAATCTTAAGAAGGATTTAGCTATGCTGAGTTCGCTTGC GGTAACTGGCATCGCCGCAGGTGTGATACCTACATTTATCGCCACCGGTATAGTGGCTGCAATAGCGCCTATCTTAGCGG CGTTAGGGTGTGCAATATATGCATTTAATCCACAGCTAAAAGAAACAGAAACCAGTAAATTACTGGATGCGAGCATCAAA GATATCGGGGCGACGTTGGGGAGTGAGCTAAAGGATGAGAAGTTGGGGCGCTTCGAATATCTGCGCCATAAATATGCCGC TTATAAGTACCGTAAGGCTGCCAAGCACACATTCGATGGCTGA
Upstream 100 bases:
>100_bases GTTACTGATAAGTTTATTATTTTTCTGATAGTTAATAAATTCGTGATCAGTCACCTTTAAAAGGTAAATAAAATACAGGC TGATATTAAAAGGAATATTT
Downstream 100 bases:
>100_bases TCGGCCTTTGTTGTCATCGCACTTCGCGGTAAACTGTCGGTAAGTTTAGGTTCACCAATCAGGAAGCGTTATGCATTGTC CGTTTTGTGCCGCTGTGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 440; Mature: 439
Protein sequence:
>440_residues MTVSYVGRGESLSWVYGVDNVNIPNSDVVDSPFNDFTQFDNMDFSANYNSILSRENKSLITSFISEYNDKVKRLSADENY ILTQKYISSLDEMCEEINKKLLYCHDSKVLKNVLDSTLQKQTEMSKYIVLLEGVPYRIEPRDIAADITNERINGAIELLN FVAKAYPKIAKESAKLQRSRPHANCSVETLNDYLEQLKKILSGKKLLSNRRQRSSSIHFKDAWGGGDKSGRINAQKNVEI NKKMEGIYIGFTQRTIESQTENQSVVFKSSKHEMVENKLIYLASLANELSKLNDSISDENLKYSINKVVGEVLELKLKKI QKMAKSSKCNFSFSNLKKDLAMLSSLAVTGIAAGVIPTFIATGIVAAIAPILAALGCAIYAFNPQLKETETSKLLDASIK DIGATLGSELKDEKLGRFEYLRHKYAAYKYRKAAKHTFDG
Sequences:
>Translated_440_residues MTVSYVGRGESLSWVYGVDNVNIPNSDVVDSPFNDFTQFDNMDFSANYNSILSRENKSLITSFISEYNDKVKRLSADENY ILTQKYISSLDEMCEEINKKLLYCHDSKVLKNVLDSTLQKQTEMSKYIVLLEGVPYRIEPRDIAADITNERINGAIELLN FVAKAYPKIAKESAKLQRSRPHANCSVETLNDYLEQLKKILSGKKLLSNRRQRSSSIHFKDAWGGGDKSGRINAQKNVEI NKKMEGIYIGFTQRTIESQTENQSVVFKSSKHEMVENKLIYLASLANELSKLNDSISDENLKYSINKVVGEVLELKLKKI QKMAKSSKCNFSFSNLKKDLAMLSSLAVTGIAAGVIPTFIATGIVAAIAPILAALGCAIYAFNPQLKETETSKLLDASIK DIGATLGSELKDEKLGRFEYLRHKYAAYKYRKAAKHTFDG >Mature_439_residues TVSYVGRGESLSWVYGVDNVNIPNSDVVDSPFNDFTQFDNMDFSANYNSILSRENKSLITSFISEYNDKVKRLSADENYI LTQKYISSLDEMCEEINKKLLYCHDSKVLKNVLDSTLQKQTEMSKYIVLLEGVPYRIEPRDIAADITNERINGAIELLNF VAKAYPKIAKESAKLQRSRPHANCSVETLNDYLEQLKKILSGKKLLSNRRQRSSSIHFKDAWGGGDKSGRINAQKNVEIN KKMEGIYIGFTQRTIESQTENQSVVFKSSKHEMVENKLIYLASLANELSKLNDSISDENLKYSINKVVGEVLELKLKKIQ KMAKSSKCNFSFSNLKKDLAMLSSLAVTGIAAGVIPTFIATGIVAAIAPILAALGCAIYAFNPQLKETETSKLLDASIKD IGATLGSELKDEKLGRFEYLRHKYAAYKYRKAAKHTFDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49366; Mature: 49235
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSYVGRGESLSWVYGVDNVNIPNSDVVDSPFNDFTQFDNMDFSANYNSILSRENKSLI CEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHCHHHHH TSFISEYNDKVKRLSADENYILTQKYISSLDEMCEEINKKLLYCHDSKVLKNVLDSTLQK HHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHH QTEMSKYIVLLEGVPYRIEPRDIAADITNERINGAIELLNFVAKAYPKIAKESAKLQRSR HHHHHHEEEEEECCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PHANCSVETLNDYLEQLKKILSGKKLLSNRRQRSSSIHFKDAWGGGDKSGRINAQKNVEI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCEE NKKMEGIYIGFTQRTIESQTENQSVVFKSSKHEMVENKLIYLASLANELSKLNDSISDEN CCCCCEEEEEEHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LKYSINKVVGEVLELKLKKIQKMAKSSKCNFSFSNLKKDLAMLSSLAVTGIAAGVIPTFI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATGIVAAIAPILAALGCAIYAFNPQLKETETSKLLDASIKDIGATLGSELKDEKLGRFEY HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRHKYAAYKYRKAAKHTFDG HHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TVSYVGRGESLSWVYGVDNVNIPNSDVVDSPFNDFTQFDNMDFSANYNSILSRENKSLI EEEEECCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHCHHHHH TSFISEYNDKVKRLSADENYILTQKYISSLDEMCEEINKKLLYCHDSKVLKNVLDSTLQK HHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHH QTEMSKYIVLLEGVPYRIEPRDIAADITNERINGAIELLNFVAKAYPKIAKESAKLQRSR HHHHHHEEEEEECCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PHANCSVETLNDYLEQLKKILSGKKLLSNRRQRSSSIHFKDAWGGGDKSGRINAQKNVEI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCEE NKKMEGIYIGFTQRTIESQTENQSVVFKSSKHEMVENKLIYLASLANELSKLNDSISDEN CCCCCEEEEEEHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC LKYSINKVVGEVLELKLKKIQKMAKSSKCNFSFSNLKKDLAMLSSLAVTGIAAGVIPTFI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATGIVAAIAPILAALGCAIYAFNPQLKETETSKLLDASIKDIGATLGSELKDEKLGRFEY HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRHKYAAYKYRKAAKHTFDG HHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA