| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is pucG [H]
Identifier: 51595220
GI number: 51595220
Start: 1044889
End: 1046214
Strand: Direct
Name: pucG [H]
Synonym: YPTB0870
Alternate gene names: 51595220
Gene position: 1044889-1046214 (Clockwise)
Preceding gene: 51595219
Following gene: 51595221
Centisome position: 22.02
GC content: 52.56
Gene sequence:
>1326_bases ATGTCAGAGATAAACCCTAATCCCTTGTTCAGGCAGATAAATCCACCTGCCCGTTTATTAATGGGGCCGGGACCGATCAA TGCCGATCCACGGGTATTACGGGCGATGTCCAGCCAGTTGATCGGCCAATATGATCCGGCGATGACCGATTATATGAATC AGGTGATGGCGTTGTATCGGGGGGTTTTCCGGACGGAAAATCGCTGGACAATGTTGATCGATGGAACCTCGCGTGCGGGC ATTGAGGCCGTTTTACTGTCGGCGATCCGTCCCGGTGACAAAGTGCTGATCCCGGTTTTTGGCCGTTTTGGCTATTTATT GTGTGAAATTGCCCGCCGTTGCCGTGCCGAAGTGCATATTATCGAGGTGCCGTGGGGGGAGGTATTCAGCCCGGATAGAA TTGAAGATGCCATCAAGCACATTCGCCCGCGCCTGTTACTGACCGTGCAGGGCGATACCTCTACCACGATGTTGCAACCG TTAGCTGAGCTGGGTGATATTTGTCGCCGCCATCAGGTGTTGTTCTATACCGATGCCACCGCGTCACTGGGTGGGAACCC ATTGGAGACGGATGCCTGGGGGTTGGATGCGGTCTCTGCTGGATTGCAAAAGTGCCTTGGCGGGCCATCCGGCAGTTCAC CGATTACCCTGAGTCCACAATTCGCCGAACAGATTCGTCGCCGTAAATGTATTGAGCAGGGTATTCGTACTTCAGATCAT GCGGATGGCGACGAGGAGATGATCTACTCCAATTACTTTGATCTGGGCATGATCATGGATTATTGGGGGCCGGAACGGCT GAATCATCATACCGAGGCCACCAGTATGTTATTCGCCGCACGTGAATGCGCCAGAGTGATATTAGAGGAAGGGCTGGATC ATGGGATCGCCCGCCATGCCTTACACGGTAGCGCACTTTTGGCCGGTATTCAGGGGATGGGGCTTTCGGTGTTTGGTGAT ATAAAGCATCGTATGAATAACGTATTGGGCGTGGTCATACCGAAAGGTATTCCCGGTGAGCAAGTCCGGCAACTGCTGTT GAATGACTTTGGTATTGAGATTGGTACCTCGTTCGGGCCGTTGAATGGCAAAATTTGGCGTATCGGCACCATGGGGTATA ACGCCCGTAAAGATTGTGTCATGCAAACGCTAGTGGCGCTGGAGGCGGTATTGAACCGTTTAGGGTTTACCACAGTTCAG GGCGCAGGGTTACAAGCCGCATGGGATGTCTATCAGGTGGATAGTGCGCATCAGGTGGATAGTACTCATCAGGCGGATAG TGCTCAAAGGAATAGCGATCATGCTCAACTGAATGGAGCGAATTGA
Upstream 100 bases:
>100_bases GCCGATCCACAGACCCGCGAATTGAAACAGTTTATATCGTCAGTCCGCGGTTTATCTGGCCCTGCCTGATGGTGATTTAT ATAAAGGATGGAGATTTTTT
Downstream 100 bases:
>100_bases TGAGCGTAACCCTGCCGGATATCGAGGCTGAACAGGCCGCATTACAGGTCTTGGCCCGTTGTGACGTATTGGCGGCAATC AGTGAATCCCCCGAAGGGCT
Product: aminotransferase, class V
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MSEINPNPLFRQINPPARLLMGPGPINADPRVLRAMSSQLIGQYDPAMTDYMNQVMALYRGVFRTENRWTMLIDGTSRAG IEAVLLSAIRPGDKVLIPVFGRFGYLLCEIARRCRAEVHIIEVPWGEVFSPDRIEDAIKHIRPRLLLTVQGDTSTTMLQP LAELGDICRRHQVLFYTDATASLGGNPLETDAWGLDAVSAGLQKCLGGPSGSSPITLSPQFAEQIRRRKCIEQGIRTSDH ADGDEEMIYSNYFDLGMIMDYWGPERLNHHTEATSMLFAARECARVILEEGLDHGIARHALHGSALLAGIQGMGLSVFGD IKHRMNNVLGVVIPKGIPGEQVRQLLLNDFGIEIGTSFGPLNGKIWRIGTMGYNARKDCVMQTLVALEAVLNRLGFTTVQ GAGLQAAWDVYQVDSAHQVDSTHQADSAQRNSDHAQLNGAN
Sequences:
>Translated_441_residues MSEINPNPLFRQINPPARLLMGPGPINADPRVLRAMSSQLIGQYDPAMTDYMNQVMALYRGVFRTENRWTMLIDGTSRAG IEAVLLSAIRPGDKVLIPVFGRFGYLLCEIARRCRAEVHIIEVPWGEVFSPDRIEDAIKHIRPRLLLTVQGDTSTTMLQP LAELGDICRRHQVLFYTDATASLGGNPLETDAWGLDAVSAGLQKCLGGPSGSSPITLSPQFAEQIRRRKCIEQGIRTSDH ADGDEEMIYSNYFDLGMIMDYWGPERLNHHTEATSMLFAARECARVILEEGLDHGIARHALHGSALLAGIQGMGLSVFGD IKHRMNNVLGVVIPKGIPGEQVRQLLLNDFGIEIGTSFGPLNGKIWRIGTMGYNARKDCVMQTLVALEAVLNRLGFTTVQ GAGLQAAWDVYQVDSAHQVDSTHQADSAQRNSDHAQLNGAN >Mature_440_residues SEINPNPLFRQINPPARLLMGPGPINADPRVLRAMSSQLIGQYDPAMTDYMNQVMALYRGVFRTENRWTMLIDGTSRAGI EAVLLSAIRPGDKVLIPVFGRFGYLLCEIARRCRAEVHIIEVPWGEVFSPDRIEDAIKHIRPRLLLTVQGDTSTTMLQPL AELGDICRRHQVLFYTDATASLGGNPLETDAWGLDAVSAGLQKCLGGPSGSSPITLSPQFAEQIRRRKCIEQGIRTSDHA DGDEEMIYSNYFDLGMIMDYWGPERLNHHTEATSMLFAARECARVILEEGLDHGIARHALHGSALLAGIQGMGLSVFGDI KHRMNNVLGVVIPKGIPGEQVRQLLLNDFGIEIGTSFGPLNGKIWRIGTMGYNARKDCVMQTLVALEAVLNRLGFTTVQG AGLQAAWDVYQVDSAHQVDSTHQADSAQRNSDHAQLNGAN
Specific function: Could encode ureidoglycolase or L-alanine:glyoxylate aminotransferase, or perhaps both activities [H]
COG id: COG0075
COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI4557289, Length=391, Percent_Identity=31.7135549872123, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI17536281, Length=378, Percent_Identity=34.1269841269841, Blast_Score=219, Evalue=2e-57, Organism=Drosophila melanogaster, GI17530823, Length=400, Percent_Identity=33.75, Blast_Score=221, Evalue=8e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR020578 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: 2.6.1.-
Molecular weight: Translated: 48509; Mature: 48378
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEINPNPLFRQINPPARLLMGPGPINADPRVLRAMSSQLIGQYDPAMTDYMNQVMALYR CCCCCCCCCCCCCCCCHHEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH GVFRTENRWTMLIDGTSRAGIEAVLLSAIRPGDKVLIPVFGRFGYLLCEIARRCRAEVHI HHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCEEEE IEVPWGEVFSPDRIEDAIKHIRPRLLLTVQGDTSTTMLQPLAELGDICRRHQVLFYTDAT EECCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCEEEEEECCH ASLGGNPLETDAWGLDAVSAGLQKCLGGPSGSSPITLSPQFAEQIRRRKCIEQGIRTSDH HHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCC ADGDEEMIYSNYFDLGMIMDYWGPERLNHHTEATSMLFAARECARVILEEGLDHGIARHA CCCCHHHHHHCHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHGSALLAGIQGMGLSVFGDIKHRMNNVLGVVIPKGIPGEQVRQLLLNDFGIEIGTSFGP HHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCEECCCCCC LNGKIWRIGTMGYNARKDCVMQTLVALEAVLNRLGFTTVQGAGLQAAWDVYQVDSAHQVD CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHCCCCCHHCC STHQADSAQRNSDHAQLNGAN CCHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SEINPNPLFRQINPPARLLMGPGPINADPRVLRAMSSQLIGQYDPAMTDYMNQVMALYR CCCCCCCCCCCCCCCHHEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH GVFRTENRWTMLIDGTSRAGIEAVLLSAIRPGDKVLIPVFGRFGYLLCEIARRCRAEVHI HHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCEEEE IEVPWGEVFSPDRIEDAIKHIRPRLLLTVQGDTSTTMLQPLAELGDICRRHQVLFYTDAT EECCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCEEEEEECCH ASLGGNPLETDAWGLDAVSAGLQKCLGGPSGSSPITLSPQFAEQIRRRKCIEQGIRTSDH HHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCC ADGDEEMIYSNYFDLGMIMDYWGPERLNHHTEATSMLFAARECARVILEEGLDHGIARHA CCCCHHHHHHCHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHGSALLAGIQGMGLSVFGDIKHRMNNVLGVVIPKGIPGEQVRQLLLNDFGIEIGTSFGP HHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCEECCCCCC LNGKIWRIGTMGYNARKDCVMQTLVALEAVLNRLGFTTVQGAGLQAAWDVYQVDSAHQVD CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHCCCCCHHCC STHQADSAQRNSDHAQLNGAN CCHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 11344136 [H]