Definition Yersinia pseudotuberculosis IP 32953, complete genome.
Accession NC_006155
Length 4,744,671

Click here to switch to the map view.

The map label for this gene is 51595211

Identifier: 51595211

GI number: 51595211

Start: 1038447

End: 1038914

Strand: Reverse

Name: 51595211

Synonym: YPTB0861

Alternate gene names: NA

Gene position: 1038914-1038447 (Counterclockwise)

Preceding gene: 51595212

Following gene: 51595210

Centisome position: 21.9

GC content: 49.15

Gene sequence:

>468_bases
TTGATAGGTCCGTTATTTGATAGGACCGTGCTTGATAAAGATAGCCATTTGGCGAGAACCGTCTCCGATGAGAATAATCA
GATGAAAAATGCATGTATCGATCACCTAGCGGTGCTGGCCGAAGTCACTGCGGCGTTTTATCGTTATGAACAGGCGCTAA
TCGGCAATGATATTGCGGTATTAGATGCGTTGTTTTGGCACGATAAACGTACAGTGCGTTTTGGCGCGGGGGAAGATCTG
TATGGTATTGATGCCATCAGAGAGTTTCGTCAGAACCGGCCTTCGGTAAGGCTGGATCGTAAATTGAAGAATACGGTGAT
CACCACCTTTGGCGAGGATACGGCGGTTGCCAGCACTGAATTTTACCGCGAAGGGAGTACACGTGTCGGCCGCCAGATGC
AAACATGGGTTAAATTACCGTGCGGTTGGCGGATTGTGGCCGCACATGTGAGCTTGATTGCTGAGTAG

Upstream 100 bases:

>100_bases
TTATGCCTGCGCGCGGCTTATGCGCTAGAGCAACAAGGGTTGGTCAGCGCGCCGGTGAGTACTGTTATTTGATAGGACCG
TTATTTGATAGGACCGCTAT

Downstream 100 bases:

>100_bases
TGGTGGTGGTGGTGATTACAGTCATGGTGATTTGTAGTAATGATGATTGTAGTAATGATGATTGTAGTAATGATGATCGC
CGTAATGGGGGGTTATCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MIGPLFDRTVLDKDSHLARTVSDENNQMKNACIDHLAVLAEVTAAFYRYEQALIGNDIAVLDALFWHDKRTVRFGAGEDL
YGIDAIREFRQNRPSVRLDRKLKNTVITTFGEDTAVASTEFYREGSTRVGRQMQTWVKLPCGWRIVAAHVSLIAE

Sequences:

>Translated_155_residues
MIGPLFDRTVLDKDSHLARTVSDENNQMKNACIDHLAVLAEVTAAFYRYEQALIGNDIAVLDALFWHDKRTVRFGAGEDL
YGIDAIREFRQNRPSVRLDRKLKNTVITTFGEDTAVASTEFYREGSTRVGRQMQTWVKLPCGWRIVAAHVSLIAE
>Mature_155_residues
MIGPLFDRTVLDKDSHLARTVSDENNQMKNACIDHLAVLAEVTAAFYRYEQALIGNDIAVLDALFWHDKRTVRFGAGEDL
YGIDAIREFRQNRPSVRLDRKLKNTVITTFGEDTAVASTEFYREGSTRVGRQMQTWVKLPCGWRIVAAHVSLIAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17587; Mature: 17587

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGPLFDRTVLDKDSHLARTVSDENNQMKNACIDHLAVLAEVTAAFYRYEQALIGNDIAV
CCCCCCCHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LDALFWHDKRTVRFGAGEDLYGIDAIREFRQNRPSVRLDRKLKNTVITTFGEDTAVASTE
HHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHEEEECCCCCHHHHHH
FYREGSTRVGRQMQTWVKLPCGWRIVAAHVSLIAE
HHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MIGPLFDRTVLDKDSHLARTVSDENNQMKNACIDHLAVLAEVTAAFYRYEQALIGNDIAV
CCCCCCCHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
LDALFWHDKRTVRFGAGEDLYGIDAIREFRQNRPSVRLDRKLKNTVITTFGEDTAVASTE
HHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHEEEECCCCCHHHHHH
FYREGSTRVGRQMQTWVKLPCGWRIVAAHVSLIAE
HHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA