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The map label for this gene is lcrT [H]

Identifier: 51595016

GI number: 51595016

Start: 796037

End: 796414

Strand: Reverse

Name: lcrT [H]

Synonym: YPTB0666

Alternate gene names: 51595016

Gene position: 796414-796037 (Counterclockwise)

Preceding gene: 51595017

Following gene: 51595014

Centisome position: 16.79

GC content: 49.47

Gene sequence:

>378_bases
GTGATTCAGGGGTTAACAGAGGCAGCAGAACGCTATCCGCGATACGGCTTTAAGAAGCTGTTTCAGATACTGCGCAGGCA
GAGCCAACGCTGGAGCCATAAACAAGTTCACCGAATTTATTGTCTGCTGAAATTAAATTTTCGTCGTAAGGGAGAACAAC
GCCTGCCGGTGCGTAATCCGGCATCACTGGCAACGCCGGAGCAGCTGAATCAAAGCTGGTCGATTGATTTTATGCATGAT
GCACTGGTCTGTGGCAGACGATTCAGGACGTTCAATGTCGTGGATGACTTTAACCGCGAAGCTCTGGCTATTGAAATTGA
CCTGAATATTCCGGCACAACGGGTTGTGTGTGCTGGACAGGAACGTGGCAAATCGTAG

Upstream 100 bases:

>100_bases
CAAACGGGCTGCACTACCCCTTTCAATAATTCCATTTATGAGAACGAGTTAAATACTCTCATTTTTTATTGTAAAATTTT
TTATATGCGATGATAAACCG

Downstream 100 bases:

>100_bases
GTATTCGCTGAAAATGCGGATGAATAATGGTCCTGGTACGCGAACTGGCACAGCGTGTGCTGCAACACGGAGACGCACTT
ATGACCATCGCACAACAGCT

Product: IS1400 transposase protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MIQGLTEAAERYPRYGFKKLFQILRRQSQRWSHKQVHRIYCLLKLNFRRKGEQRLPVRNPASLATPEQLNQSWSIDFMHD
ALVCGRRFRTFNVVDDFNREALAIEIDLNIPAQRVVCAGQERGKS

Sequences:

>Translated_125_residues
MIQGLTEAAERYPRYGFKKLFQILRRQSQRWSHKQVHRIYCLLKLNFRRKGEQRLPVRNPASLATPEQLNQSWSIDFMHD
ALVCGRRFRTFNVVDDFNREALAIEIDLNIPAQRVVCAGQERGKS
>Mature_125_residues
MIQGLTEAAERYPRYGFKKLFQILRRQSQRWSHKQVHRIYCLLKLNFRRKGEQRLPVRNPASLATPEQLNQSWSIDFMHD
ALVCGRRFRTFNVVDDFNREALAIEIDLNIPAQRVVCAGQERGKS

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14744; Mature: 14744

Theoretical pI: Translated: 10.84; Mature: 10.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQGLTEAAERYPRYGFKKLFQILRRQSQRWSHKQVHRIYCLLKLNFRRKGEQRLPVRNP
CCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCCCCCCCCCCCCCC
ASLATPEQLNQSWSIDFMHDALVCGRRFRTFNVVDDFNREALAIEIDLNIPAQRVVCAGQ
CCCCCHHHCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCEEEEEEECCCCHHHHEECCC
ERGKS
CCCCC
>Mature Secondary Structure
MIQGLTEAAERYPRYGFKKLFQILRRQSQRWSHKQVHRIYCLLKLNFRRKGEQRLPVRNP
CCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCCCCCCCCCCCCCC
ASLATPEQLNQSWSIDFMHDALVCGRRFRTFNVVDDFNREALAIEIDLNIPAQRVVCAGQ
CCCCCHHHCCCCCCCHHHHHHHHHHCCCCEECCCCCCCCCEEEEEEECCCCHHHHEECCC
ERGKS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9746557; 9748454; 11586360 [H]