| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51595004
Identifier: 51595004
GI number: 51595004
Start: 775739
End: 776230
Strand: Direct
Name: 51595004
Synonym: YPTB0653
Alternate gene names: NA
Gene position: 775739-776230 (Clockwise)
Preceding gene: 51595003
Following gene: 51595005
Centisome position: 16.35
GC content: 52.64
Gene sequence:
>492_bases ATGCGTAGCCTCTTTCGTGTGTTGCCTATTTTTATCCTGACAGGTTGCGTCCTGCTCAGCGGCTGTAGCTGGTTTTCCTC ATCCTCAGAAGCGGCGCTACAGAAACGGCGGATTGACTTGCAGGTTGTTGCGGCTCCTCTCATCAATCCTGGGCCCAACG GTCAGGCACAGCCCTTGAAGGTATGCATTATTGAGCTGAATAAAGAGGGGTGGTCACCCCCCGGTTTGTATCAGGGGACG CTCTGCAGTGGCATCAGTGTAGGAGGTGAAGTCGTCAGCGTGACGGAATACATCCTTGCGCCGACAGAGGTGCGTCAATA TTCCCGCGATGTTCCCTTTGAACAAGAGCGCTGGTGGGCAATAGCGGCTGAGTTTCAGGAGATGAGTAACGGTAAAAGCC TATTAATGCTGAAATCTGATGCCCGTGCGGACTTCAACCGTGTGGTGCTCGTTGATGGTAAGGCCCTGTCATTAAAAGCG TCAACAAAGTAG
Upstream 100 bases:
>100_bases CAGGGAAGCCCAGCAACACGTTTAGGAGATATGAGTATGACCAATAATTACAACGCGCCTTCGACGCAAATTGCGCCCAG CCAGACCAAGTATTTTGTCA
Downstream 100 bases:
>100_bases GTCATCAAGAGCGTCAACAGACTGGCAAGTGTCAATAGACTGGCAAGTGTCAACAGACTGGAAAGCGTCAATAGACTAAA AAGTTTCAACAGACTAAAAA
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MRSLFRVLPIFILTGCVLLSGCSWFSSSSEAALQKRRIDLQVVAAPLINPGPNGQAQPLKVCIIELNKEGWSPPGLYQGT LCSGISVGGEVVSVTEYILAPTEVRQYSRDVPFEQERWWAIAAEFQEMSNGKSLLMLKSDARADFNRVVLVDGKALSLKA STK
Sequences:
>Translated_163_residues MRSLFRVLPIFILTGCVLLSGCSWFSSSSEAALQKRRIDLQVVAAPLINPGPNGQAQPLKVCIIELNKEGWSPPGLYQGT LCSGISVGGEVVSVTEYILAPTEVRQYSRDVPFEQERWWAIAAEFQEMSNGKSLLMLKSDARADFNRVVLVDGKALSLKA STK >Mature_163_residues MRSLFRVLPIFILTGCVLLSGCSWFSSSSEAALQKRRIDLQVVAAPLINPGPNGQAQPLKVCIIELNKEGWSPPGLYQGT LCSGISVGGEVVSVTEYILAPTEVRQYSRDVPFEQERWWAIAAEFQEMSNGKSLLMLKSDARADFNRVVLVDGKALSLKA STK
Specific function: Unknown
COG id: COG3521
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17860; Mature: 17860
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSLFRVLPIFILTGCVLLSGCSWFSSSSEAALQKRRIDLQVVAAPLINPGPNGQAQPLK CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCEE VCIIELNKEGWSPPGLYQGTLCSGISVGGEVVSVTEYILAPTEVRQYSRDVPFEQERWWA EEEEEECCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHH IAAEFQEMSNGKSLLMLKSDARADFNRVVLVDGKALSLKASTK HHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCEEEEEECCC >Mature Secondary Structure MRSLFRVLPIFILTGCVLLSGCSWFSSSSEAALQKRRIDLQVVAAPLINPGPNGQAQPLK CCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCEE VCIIELNKEGWSPPGLYQGTLCSGISVGGEVVSVTEYILAPTEVRQYSRDVPFEQERWWA EEEEEECCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHH IAAEFQEMSNGKSLLMLKSDARADFNRVVLVDGKALSLKASTK HHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA