| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51594960
Identifier: 51594960
GI number: 51594960
Start: 720917
End: 723373
Strand: Reverse
Name: 51594960
Synonym: YPTB0609
Alternate gene names: NA
Gene position: 723373-720917 (Counterclockwise)
Preceding gene: 51594961
Following gene: 51594956
Centisome position: 15.25
GC content: 35.33
Gene sequence:
>2457_bases ATGAAAAAAACCAACAAACTATTAATTAGTATTGTTTCCGCAATATCATTCTCAGCTTACTCAAATGATATAAATGATAT AAATGATGCAAAGGTCTGTTTTTATGAGTTGGAAAACTTTTCTGGTGAATCATTTTGTGCCTATGAGGGCGAGTCACAAT CCACTATCAATAGTAATTTTGACAACAAAATTAAATCAATTTCAATTCCTCCAGGGATGGTAATCACTCTTTATGATGGC ATTGATTTTAGCGGAAAAGAAAAGAAATTAAAAAATGATGTTAATCTAAAGGAGATGAAATCATTTGGACTATATAATAA AATAAACTCATATCACATAGATCCTGCAGTATGTTTTTATACAGAAGATAATTTTCAAGGAGACAGTACGTGTTTAGCGG CAAGTCAACACATAGATTTATATAGTGATGCTGAAGGGTTTGCTGACTCTAATCGTACCGTTTTACCTATTAATAATGAC AGCATTCAATCAATAAAAGTTCCTCTTGGAATGATGACAACAATCTATAAAAATGACCATTTCAATGCTCCTTTCTTCGA GTTAACAGAAAACATTAACTTAGAAACATTAAAAACTCTGGCCATGGATAATCAACTCACCAGCCTTAAGGCATCGGAAA AAAAAGGTCTGCACTGTAATCAAAAATGTATTATTTTAGAAAAACACGAAATAGATTTACCTGAGTCTTTCGGTGAGTAC TGGCATGATTCTCGTTTAGTAAATAAACAAGTTATACTGTCTTTTAATAGTCAAGGGAATGGAATTAATGATGATTATCA AATTAACTTAACAAACGGCCCAAATATTAGCATATTAAAGAATGAAATTATTTTTTCTGACTATAATATGGAAACCAAGT TTTCTTTTGATCGTATTGACACATTGGACAAGCTTTCATTCATATTACAATTAGAAAAAGATATCGCACAAGTTCAATAC ATCCAAACATTAGATGATCAACTAATCGATCTATCACCCATTATTTCATTTAAATGGCAACACACGATTGGTGATACCCC CACATTAACCATCACAAATAAAAATACAGACAAGCCATTAATTCTTAATAAATCTATTATTACCGCAGATACAGGCGATC AAAATTGGGAAAAGAGAGATATCGAAAATACAAGTCAAATAATATGCGCATTCACTCCATTCCTAAACCTTTATAATTAT ATTGTACAAGGAACATGCCGACAACTAGATGGAATTATTTTCAGAGCAGATCAATATTTCAATAGTAATACCAAAGGGAA AACGTTACATATTGCAGGAAAAAGTTTCCCATTAAAGCCTGGTTCATTAACAGAAGTAAGCACTGATGGGCGACATAAAA ATAAAATGATGCTAACTTATATTGACAATATAAATAACAATCAGTCGCTCAGTTTACCTGCTGTCGCAAAAACCTGTATG GTATCGATCCACTCTCTACTTAGCACGCGCCAAACTCGTCAAGTTAGACCTCCGTGTATCGATTGGACACTAGAAATAAT GACTGATTTCACATTATTATTCGGTGGCAGTCTACGGACTTGGAATACAGAATATTTCGGTAGAATTATACAGTCTATTA TTACAACAGGAAGTACCGGTGTTGCAGTAGAAAATACAGAGGTAGAAAAAAGGCTCAGTCATGCGGTAAAAAAAGCCATT ATGTCACAATCAATAGATAGCACTCTTGACCACATTAAAACTGCGTTTGACTATGCTCAGCTAAATTACTTTGACTATAG CCTTTTTTATGTGTCAGAAGATACGCCATCTCAGGTAGAACAACTACCACTCGGTATCTATGAGCTATTATTATCATCGT TTATCTATAGACCAATACCACCAACGATTATTGAAAATAGCGAACGAGTAGAACAACATGAGTTAGCTTTTGAAATAGAA ATTTTACCAAGCCCATTCCCTGAAGATGCAAGGCTTTCCGACACTGAAATTGAACATGCCCAAGAATTGCGACAAAAAAT TAGTGAAACTATCGCTCAATGGGGACAGCAGTACCAAGGCGCTCATACAAATGATGATGTTGATAAAGAGATCAACTCTG ATGAAAATGCCGCCTTAAGTAAACTTCTCCATGCCGGGCATATTGTTACTGGCATTATTCATCGTAGATTGATTCTTAAC CGCCCAGGGGAAATTTATGTAGTGGCCAAATTGAGGGGAGAGATAATCGCAATTGTCTTGGCAGATCGTTTTAATAATAG GGATGAAGTGGAACTGGTGGCCTCAGCAACGTTGCCTGACTATGTCTTATCGCCCGATAATGAAGGTACAGTAAGAGGGG CAGGCACTGCTGCGGTTTACGAGCTAGCTCGATACTTACAACAACAAGGTGCCAAGACATTATTTTCTGAGACTATTTCC CAGCCATCAGCACGCGTCAAACAAAAAGTCGGATTTACCTTTAAATCAGAATTCTAA
Upstream 100 bases:
>100_bases AACGAAAAATAGATAAAGTGAAAAAAACAAATCATCATATAATCCTCATCGGCTCGATAGTGATAAGTAATTTTTAAACT AACACAGACAAGGAGCGCCG
Downstream 100 bases:
>100_bases GGTATAGAAAAAAGATAAAAGCCCATAATTTATTGATAATAATTATGGGCTTTTTAAAGTGAATTGACTTAATTAACTCA GTTCATCACCCTCTTAGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 818; Mature: 818
Protein sequence:
>818_residues MKKTNKLLISIVSAISFSAYSNDINDINDAKVCFYELENFSGESFCAYEGESQSTINSNFDNKIKSISIPPGMVITLYDG IDFSGKEKKLKNDVNLKEMKSFGLYNKINSYHIDPAVCFYTEDNFQGDSTCLAASQHIDLYSDAEGFADSNRTVLPINND SIQSIKVPLGMMTTIYKNDHFNAPFFELTENINLETLKTLAMDNQLTSLKASEKKGLHCNQKCIILEKHEIDLPESFGEY WHDSRLVNKQVILSFNSQGNGINDDYQINLTNGPNISILKNEIIFSDYNMETKFSFDRIDTLDKLSFILQLEKDIAQVQY IQTLDDQLIDLSPIISFKWQHTIGDTPTLTITNKNTDKPLILNKSIITADTGDQNWEKRDIENTSQIICAFTPFLNLYNY IVQGTCRQLDGIIFRADQYFNSNTKGKTLHIAGKSFPLKPGSLTEVSTDGRHKNKMMLTYIDNINNNQSLSLPAVAKTCM VSIHSLLSTRQTRQVRPPCIDWTLEIMTDFTLLFGGSLRTWNTEYFGRIIQSIITTGSTGVAVENTEVEKRLSHAVKKAI MSQSIDSTLDHIKTAFDYAQLNYFDYSLFYVSEDTPSQVEQLPLGIYELLLSSFIYRPIPPTIIENSERVEQHELAFEIE ILPSPFPEDARLSDTEIEHAQELRQKISETIAQWGQQYQGAHTNDDVDKEINSDENAALSKLLHAGHIVTGIIHRRLILN RPGEIYVVAKLRGEIIAIVLADRFNNRDEVELVASATLPDYVLSPDNEGTVRGAGTAAVYELARYLQQQGAKTLFSETIS QPSARVKQKVGFTFKSEF
Sequences:
>Translated_818_residues MKKTNKLLISIVSAISFSAYSNDINDINDAKVCFYELENFSGESFCAYEGESQSTINSNFDNKIKSISIPPGMVITLYDG IDFSGKEKKLKNDVNLKEMKSFGLYNKINSYHIDPAVCFYTEDNFQGDSTCLAASQHIDLYSDAEGFADSNRTVLPINND SIQSIKVPLGMMTTIYKNDHFNAPFFELTENINLETLKTLAMDNQLTSLKASEKKGLHCNQKCIILEKHEIDLPESFGEY WHDSRLVNKQVILSFNSQGNGINDDYQINLTNGPNISILKNEIIFSDYNMETKFSFDRIDTLDKLSFILQLEKDIAQVQY IQTLDDQLIDLSPIISFKWQHTIGDTPTLTITNKNTDKPLILNKSIITADTGDQNWEKRDIENTSQIICAFTPFLNLYNY IVQGTCRQLDGIIFRADQYFNSNTKGKTLHIAGKSFPLKPGSLTEVSTDGRHKNKMMLTYIDNINNNQSLSLPAVAKTCM VSIHSLLSTRQTRQVRPPCIDWTLEIMTDFTLLFGGSLRTWNTEYFGRIIQSIITTGSTGVAVENTEVEKRLSHAVKKAI MSQSIDSTLDHIKTAFDYAQLNYFDYSLFYVSEDTPSQVEQLPLGIYELLLSSFIYRPIPPTIIENSERVEQHELAFEIE ILPSPFPEDARLSDTEIEHAQELRQKISETIAQWGQQYQGAHTNDDVDKEINSDENAALSKLLHAGHIVTGIIHRRLILN RPGEIYVVAKLRGEIIAIVLADRFNNRDEVELVASATLPDYVLSPDNEGTVRGAGTAAVYELARYLQQQGAKTLFSETIS QPSARVKQKVGFTFKSEF >Mature_818_residues MKKTNKLLISIVSAISFSAYSNDINDINDAKVCFYELENFSGESFCAYEGESQSTINSNFDNKIKSISIPPGMVITLYDG IDFSGKEKKLKNDVNLKEMKSFGLYNKINSYHIDPAVCFYTEDNFQGDSTCLAASQHIDLYSDAEGFADSNRTVLPINND SIQSIKVPLGMMTTIYKNDHFNAPFFELTENINLETLKTLAMDNQLTSLKASEKKGLHCNQKCIILEKHEIDLPESFGEY WHDSRLVNKQVILSFNSQGNGINDDYQINLTNGPNISILKNEIIFSDYNMETKFSFDRIDTLDKLSFILQLEKDIAQVQY IQTLDDQLIDLSPIISFKWQHTIGDTPTLTITNKNTDKPLILNKSIITADTGDQNWEKRDIENTSQIICAFTPFLNLYNY IVQGTCRQLDGIIFRADQYFNSNTKGKTLHIAGKSFPLKPGSLTEVSTDGRHKNKMMLTYIDNINNNQSLSLPAVAKTCM VSIHSLLSTRQTRQVRPPCIDWTLEIMTDFTLLFGGSLRTWNTEYFGRIIQSIITTGSTGVAVENTEVEKRLSHAVKKAI MSQSIDSTLDHIKTAFDYAQLNYFDYSLFYVSEDTPSQVEQLPLGIYELLLSSFIYRPIPPTIIENSERVEQHELAFEIE ILPSPFPEDARLSDTEIEHAQELRQKISETIAQWGQQYQGAHTNDDVDKEINSDENAALSKLLHAGHIVTGIIHRRLILN RPGEIYVVAKLRGEIIAIVLADRFNNRDEVELVASATLPDYVLSPDNEGTVRGAGTAAVYELARYLQQQGAKTLFSETIS QPSARVKQKVGFTFKSEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92389; Mature: 92389
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS00061 ADH_SHORT ; PS50915 CRYSTALLIN_BETA_GAMMA L=rr
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTNKLLISIVSAISFSAYSNDINDINDAKVCFYELENFSGESFCAYEGESQSTINSNF CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCC DNKIKSISIPPGMVITLYDGIDFSGKEKKLKNDVNLKEMKSFGLYNKINSYHIDPAVCFY CCCCEEECCCCCEEEEEECCCCCCCCHHHHHCCCCHHHHHHCCCHHCCCCEECCCEEEEE TEDNFQGDSTCLAASQHIDLYSDAEGFADSNRTVLPINNDSIQSIKVPLGMMTTIYKNDH ECCCCCCCCCEEEHHCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCHHHEEHEEECCC FNAPFFELTENINLETLKTLAMDNQLTSLKASEKKGLHCNQKCIILEKHEIDLPESFGEY CCCCHHHHHCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHH WHDSRLVNKQVILSFNSQGNGINDDYQINLTNGPNISILKNEIIFSDYNMETKFSFDRID HCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCEEEEEEEEEEECCCCCEEECHHHHH TLDKLSFILQLEKDIAQVQYIQTLDDQLIDLSPIISFKWQHTIGDTPTLTITNKNTDKPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECCCCCCCE ILNKSIITADTGDQNWEKRDIENTSQIICAFTPFLNLYNYIVQGTCRQLDGIIFRADQYF EEECEEEEECCCCCCCCHHCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHC NSNTKGKTLHIAGKSFPLKPGSLTEVSTDGRHKNKMMLTYIDNINNNQSLSLPAVAKTCM CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHH VSIHSLLSTRQTRQVRPPCIDWTLEIMTDFTLLFGGSLRTWNTEYFGRIIQSIITTGSTG HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC VAVENTEVEKRLSHAVKKAIMSQSIDSTLDHIKTAFDYAQLNYFDYSLFYVSEDTPSQVE EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCHHHHH QLPLGIYELLLSSFIYRPIPPTIIENSERVEQHELAFEIEILPSPFPEDARLSDTEIEHA HCCHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHCEEEEEEECCCCCCCCCCCCCHHHHHH QELRQKISETIAQWGQQYQGAHTNDDVDKEINSDENAALSKLLHAGHIVTGIIHRRLILN HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC RPGEIYVVAKLRGEIIAIVLADRFNNRDEVELVASATLPDYVLSPDNEGTVRGAGTAAVY CCCCEEEEEEECCCEEEEEEECCCCCCCCEEEEEECCCCCEEECCCCCCCEECCCHHHHH ELARYLQQQGAKTLFSETISQPSARVKQKVGFTFKSEF HHHHHHHHCCHHHHHHHHHCCHHHHHHHHHCCEEECCC >Mature Secondary Structure MKKTNKLLISIVSAISFSAYSNDINDINDAKVCFYELENFSGESFCAYEGESQSTINSNF CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCC DNKIKSISIPPGMVITLYDGIDFSGKEKKLKNDVNLKEMKSFGLYNKINSYHIDPAVCFY CCCCEEECCCCCEEEEEECCCCCCCCHHHHHCCCCHHHHHHCCCHHCCCCEECCCEEEEE TEDNFQGDSTCLAASQHIDLYSDAEGFADSNRTVLPINNDSIQSIKVPLGMMTTIYKNDH ECCCCCCCCCEEEHHCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCHHHEEHEEECCC FNAPFFELTENINLETLKTLAMDNQLTSLKASEKKGLHCNQKCIILEKHEIDLPESFGEY CCCCHHHHHCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHH WHDSRLVNKQVILSFNSQGNGINDDYQINLTNGPNISILKNEIIFSDYNMETKFSFDRID HCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCEEEEEEEEEEECCCCCEEECHHHHH TLDKLSFILQLEKDIAQVQYIQTLDDQLIDLSPIISFKWQHTIGDTPTLTITNKNTDKPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEECCCCCCCE ILNKSIITADTGDQNWEKRDIENTSQIICAFTPFLNLYNYIVQGTCRQLDGIIFRADQYF EEECEEEEECCCCCCCCHHCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHC NSNTKGKTLHIAGKSFPLKPGSLTEVSTDGRHKNKMMLTYIDNINNNQSLSLPAVAKTCM CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHH VSIHSLLSTRQTRQVRPPCIDWTLEIMTDFTLLFGGSLRTWNTEYFGRIIQSIITTGSTG HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCC VAVENTEVEKRLSHAVKKAIMSQSIDSTLDHIKTAFDYAQLNYFDYSLFYVSEDTPSQVE EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECCCHHHHH QLPLGIYELLLSSFIYRPIPPTIIENSERVEQHELAFEIEILPSPFPEDARLSDTEIEHA HCCHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHCEEEEEEECCCCCCCCCCCCCHHHHHH QELRQKISETIAQWGQQYQGAHTNDDVDKEINSDENAALSKLLHAGHIVTGIIHRRLILN HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC RPGEIYVVAKLRGEIIAIVLADRFNNRDEVELVASATLPDYVLSPDNEGTVRGAGTAAVY CCCCEEEEEEECCCEEEEEEECCCCCCCCEEEEEECCCCCEEECCCCCCCEECCCHHHHH ELARYLQQQGAKTLFSETISQPSARVKQKVGFTFKSEF HHHHHHHHCCHHHHHHHHHCCHHHHHHHHHCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA