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The map label for this gene is rsmC

Identifier: 51594923

GI number: 51594923

Start: 674877

End: 675920

Strand: Reverse

Name: rsmC

Synonym: YPTB0572

Alternate gene names: 51594923

Gene position: 675920-674877 (Counterclockwise)

Preceding gene: 51594936

Following gene: 51594921

Centisome position: 14.25

GC content: 51.92

Gene sequence:

>1044_bases
ATGTCAGCATTAACCCCAGCCAGTGAAGTGATACTGCGCCATAGTGATGAATTTATAGCCCGCCACGTCCTGTTTGCCGG
TGATTTACAAGATGCGCTGCCAGCGCAATTTGATGCAGCCGGGGTGCGGGTTCACACCAATCAATATCACCACTGGCAAT
TACTGAGCAACACGCTGGAAGAGAATGTGCAATTCGGTCTTTTAGCCACGGCAGAAACTCTCGCAGCTTGCGACACCCTG
ATTTACTACTGGCCCAAAAGCAAACAAGAAGCCCAATTCCAGTTGGCTAACCTGCTTTCTATACTGCCTGTTGGCACCGA
TATTTTTGTTGTGGGTGAAAACCGCAGTGGTGTACGCAGCGCAGAAGAAATGTTGGCAGACTTCGCGCAGTTAGCCAAGA
TAGACAGCGCTCGCCGCTGTGGTTTATACCATGGCCGTTTAGACAAACAACCCGAGTTTGATGCTGATGCCTGGTGGGAA
AGCTATCAGGTCGGTAGTGTGACGGTCAAAACATTGCCGGGTGTCTTCAGCCGCGATTCTCTGGATTCGGGTAGTCATCT
GTTGCTGTCCACCTTTAACGAGCCCTTTAAAGGCAGCGTATTGGATGTCGGTTGTGGTGCTGGAGTATTAGCCTCGGTTC
TGGCGCAGCAATCGCCAAAAATCAAATGGACGTTGAGTGATGTCAGTGCCGCAGCCATTGAAGCCAGCCGAGCCACATTG
GCGGTGAATAATATTGAGGCGCAAGTAATTGCCAGTAACGTCTATTCCGACATCAAAGGCCGCTTTGAGATGATCATTTC
GAACCCGCCTTTCCATGATGGGATCCAAACCAGCCTGACCGCCGCTGAGATGCTGATCCGTGGAGCGACCGCCCACCTAC
ATGTGGGGGGGAAATTACGCATCGTAGCGAACTCCTTCCTGCCGTATCCTGCCTTGCTGGATGCCGCATTTGGTAGCCAC
GAAGTGCTGGCACAGAATGGCCGCTTTAAAGTGTATCAGGCAACTGTCGGGCGTCCGCCACGGGATCCGAAGAAAAAACG
TTAA

Upstream 100 bases:

>100_bases
CAGAGCAAGCCGTAATTTGGCGCTATGCTAGCAAACCCATCGAACATGCGCCAACAAACCTCTATAATCCCCGATTATAT
TATTAAGGAGCCAAAGACTG

Downstream 100 bases:

>100_bases
TATTAAAGCACTAAGATTCAAACAGTAAGATAGGCCACCTCTTCCTCGCCGTAGCATTCATTCGCTGCGGCATGGAACGG
GAACAGCGCATCCAGTCCCC

Product: 16S ribosomal RNA m2G1207 methyltransferase

Products: NA

Alternate protein names: 16S rRNA m2G1207 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rsmC [H]

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MSALTPASEVILRHSDEFIARHVLFAGDLQDALPAQFDAAGVRVHTNQYHHWQLLSNTLEENVQFGLLATAETLAACDTL
IYYWPKSKQEAQFQLANLLSILPVGTDIFVVGENRSGVRSAEEMLADFAQLAKIDSARRCGLYHGRLDKQPEFDADAWWE
SYQVGSVTVKTLPGVFSRDSLDSGSHLLLSTFNEPFKGSVLDVGCGAGVLASVLAQQSPKIKWTLSDVSAAAIEASRATL
AVNNIEAQVIASNVYSDIKGRFEMIISNPPFHDGIQTSLTAAEMLIRGATAHLHVGGKLRIVANSFLPYPALLDAAFGSH
EVLAQNGRFKVYQATVGRPPRDPKKKR

Sequences:

>Translated_347_residues
MSALTPASEVILRHSDEFIARHVLFAGDLQDALPAQFDAAGVRVHTNQYHHWQLLSNTLEENVQFGLLATAETLAACDTL
IYYWPKSKQEAQFQLANLLSILPVGTDIFVVGENRSGVRSAEEMLADFAQLAKIDSARRCGLYHGRLDKQPEFDADAWWE
SYQVGSVTVKTLPGVFSRDSLDSGSHLLLSTFNEPFKGSVLDVGCGAGVLASVLAQQSPKIKWTLSDVSAAAIEASRATL
AVNNIEAQVIASNVYSDIKGRFEMIISNPPFHDGIQTSLTAAEMLIRGATAHLHVGGKLRIVANSFLPYPALLDAAFGSH
EVLAQNGRFKVYQATVGRPPRDPKKKR
>Mature_346_residues
SALTPASEVILRHSDEFIARHVLFAGDLQDALPAQFDAAGVRVHTNQYHHWQLLSNTLEENVQFGLLATAETLAACDTLI
YYWPKSKQEAQFQLANLLSILPVGTDIFVVGENRSGVRSAEEMLADFAQLAKIDSARRCGLYHGRLDKQPEFDADAWWES
YQVGSVTVKTLPGVFSRDSLDSGSHLLLSTFNEPFKGSVLDVGCGAGVLASVLAQQSPKIKWTLSDVSAAAIEASRATLA
VNNIEAQVIASNVYSDIKGRFEMIISNPPFHDGIQTSLTAAEMLIRGATAHLHVGGKLRIVANSFLPYPALLDAAFGSHE
VLAQNGRFKVYQATVGRPPRDPKKKR

Specific function: Specifically methylates the guanosine in position 1207 of 16S rRNA in the 30S particle [H]

COG id: COG2813

COG function: function code J; 16S RNA G1207 methylase RsmC

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmC family [H]

Homologues:

Organism=Escherichia coli, GI1790830, Length=338, Percent_Identity=69.5266272189349, Blast_Score=495, Evalue=1e-141,
Organism=Escherichia coli, GI87082206, Length=177, Percent_Identity=32.2033898305085, Blast_Score=92, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR013675
- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS; PF08468 MTS_N [H]

EC number: =2.1.1.172 [H]

Molecular weight: Translated: 37829; Mature: 37698

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALTPASEVILRHSDEFIARHVLFAGDLQDALPAQFDAAGVRVHTNQYHHWQLLSNTLE
CCCCCCHHHHHHHCCHHHHHHHHHHCCCHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHH
ENVQFGLLATAETLAACDTLIYYWPKSKQEAQFQLANLLSILPVGTDIFVVGENRSGVRS
HCCCEEEEHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHH
AEEMLADFAQLAKIDSARRCGLYHGRLDKQPEFDADAWWESYQVGSVTVKTLPGVFSRDS
HHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHCEEECEEEEEECCCCCCCCC
LDSGSHLLLSTFNEPFKGSVLDVGCGAGVLASVLAQQSPKIKWTLSDVSAAAIEASRATL
CCCCCEEEEECCCCCCCCCEEEECCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCEEE
AVNNIEAQVIASNVYSDIKGRFEMIISNPPFHDGIQTSLTAAEMLIRGATAHLHVGGKLR
EEECCCHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCEEE
IVANSFLPYPALLDAAFGSHEVLAQNGRFKVYQATVGRPPRDPKKKR
EEECCCCCCHHHHHHCCCCCHHEECCCCEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
SALTPASEVILRHSDEFIARHVLFAGDLQDALPAQFDAAGVRVHTNQYHHWQLLSNTLE
CCCCCHHHHHHHCCHHHHHHHHHHCCCHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHH
ENVQFGLLATAETLAACDTLIYYWPKSKQEAQFQLANLLSILPVGTDIFVVGENRSGVRS
HCCCEEEEHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHH
AEEMLADFAQLAKIDSARRCGLYHGRLDKQPEFDADAWWESYQVGSVTVKTLPGVFSRDS
HHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCHHHHHHCEEECEEEEEECCCCCCCCC
LDSGSHLLLSTFNEPFKGSVLDVGCGAGVLASVLAQQSPKIKWTLSDVSAAAIEASRATL
CCCCCEEEEECCCCCCCCCEEEECCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCEEE
AVNNIEAQVIASNVYSDIKGRFEMIISNPPFHDGIQTSLTAAEMLIRGATAHLHVGGKLR
EEECCCHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCEEE
IVANSFLPYPALLDAAFGSHEVLAQNGRFKVYQATVGRPPRDPKKKR
EEECCCCCCHHHHHHCCCCCHHEECCCCEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA