| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is phnI
Identifier: 51594866
GI number: 51594866
Start: 603716
End: 604894
Strand: Reverse
Name: phnI
Synonym: YPTB0514
Alternate gene names: 51594866
Gene position: 604894-603716 (Counterclockwise)
Preceding gene: 51594867
Following gene: 51594865
Centisome position: 12.75
GC content: 55.73
Gene sequence:
>1179_bases ATGTACGTTGCCGTGAAAGGGGGCGAAAAAGCCATTGCCGCCGCCCATCAATTACTGGAAAACCAGCGGCGGGGCGATAC TCAGATCCCGGCGATCGATTGTGAGCAAATTGAGCAGCAGTTAGGTTTAGCCGTTGATCGGGTAATGACCGAGGGCGGTA TCTATGATCGTGAATTGGCGGCGCTGGCCATTAAGCAGGCCAGTGGTGACCTGGTTGAAGCCATCTTTCTGTTGCGGGCT TACCGTACCACCTTGCCCCGTCTGGCGGTCAGTCTACCGCTGGCAACCGACACGATGCGCCTGGAACGGCGTATTTCGGC CATTTACAAGGATCTGCCCGGTGGGCAAGTGCTCGGCCCCACCTATGATTACACCCATCGGCTGTTGGATTTTACCCTGT TGGCCTCTGGCGAAACGCCGCTAGCCCCCCGTGGCGAAGAAGCCTTGCCAGAGCCTTGCGCTCACGTATTTGATTTACTG ACCCAAGAGCAGTTAGCGCTGCCGGAGCAAGATGACGGCACTCCGCCAGATGATATCACCCGGAACCCGCCAGTTTATCC CTGTAATCGCTCGGCACGGCTACAACAATTGGTCAGAGGTGATGAAGGCTTTCTGCTGGCGCTGGGTTACTCCACCCAGC GCGGTTATGGCCGCACTCACCCGTTCGCCGCCGAGATCCGCACCGGTTACCTGACCATTGCCATTCAGCCAGAAGAACTG GGCTTTGCGATCGATATTGGTGAGATCCTGTTGACCGAATGCGAGATGGTCAATGGTTTTGTCGATCCGGTCTCAGAACC GCCCCATTTTACCCGGGGCTATGGCTTAGTTTTTGGCCGTGGTGAACGCAAAGCCATGTCGATAGCGCTGATGGATCGCG CCCTGCAAAGCCGTGAGTATCAGGAAGCGGTTTCCAGCCCGGCGCAGGATGAAGAGTTCGTGTTATCCCATGCCGATAAC GTTGAGGCCGCTGGTTTTGTCTCTCATCTGAAACTGCCCCATTACGTCGATTTCCAGGCGGAACTGGCACTGCTCAAACG CCTACGCAGTGAACATCTGGCCGCGTCATCCGCCCTTTTCACACCGCAATTATCGTCTTCTTCACTACCATCATCTTCAC TACCATCATCATCTTCACTACCATCATCCTCTCAACGACAGGAGCCACACCATGACTGA
Upstream 100 bases:
>100_bases TTAACCGGCCTGCCGTGTTCCCCGCCGGCCTTGATTTCCTGTTGACCTGTGGTGAGCACCTGATGGCTCTCCCACGGACC ACTCATGTGGAGGTGTGCTG
Downstream 100 bases:
>100_bases GGTTCTCACTGGCTACAACCTGGGTTATTTGGATGAGCAAACCAAGCGTACATTGCGCCGTGCCATACTGAAAGCCGTCG CAATCCCAGGCTATCAAGTG
Product: carbon-phosphorous lyase subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MYVAVKGGEKAIAAAHQLLENQRRGDTQIPAIDCEQIEQQLGLAVDRVMTEGGIYDRELAALAIKQASGDLVEAIFLLRA YRTTLPRLAVSLPLATDTMRLERRISAIYKDLPGGQVLGPTYDYTHRLLDFTLLASGETPLAPRGEEALPEPCAHVFDLL TQEQLALPEQDDGTPPDDITRNPPVYPCNRSARLQQLVRGDEGFLLALGYSTQRGYGRTHPFAAEIRTGYLTIAIQPEEL GFAIDIGEILLTECEMVNGFVDPVSEPPHFTRGYGLVFGRGERKAMSIALMDRALQSREYQEAVSSPAQDEEFVLSHADN VEAAGFVSHLKLPHYVDFQAELALLKRLRSEHLAASSALFTPQLSSSSLPSSSLPSSSSLPSSSQRQEPHHD
Sequences:
>Translated_392_residues MYVAVKGGEKAIAAAHQLLENQRRGDTQIPAIDCEQIEQQLGLAVDRVMTEGGIYDRELAALAIKQASGDLVEAIFLLRA YRTTLPRLAVSLPLATDTMRLERRISAIYKDLPGGQVLGPTYDYTHRLLDFTLLASGETPLAPRGEEALPEPCAHVFDLL TQEQLALPEQDDGTPPDDITRNPPVYPCNRSARLQQLVRGDEGFLLALGYSTQRGYGRTHPFAAEIRTGYLTIAIQPEEL GFAIDIGEILLTECEMVNGFVDPVSEPPHFTRGYGLVFGRGERKAMSIALMDRALQSREYQEAVSSPAQDEEFVLSHADN VEAAGFVSHLKLPHYVDFQAELALLKRLRSEHLAASSALFTPQLSSSSLPSSSLPSSSSLPSSSQRQEPHHD >Mature_392_residues MYVAVKGGEKAIAAAHQLLENQRRGDTQIPAIDCEQIEQQLGLAVDRVMTEGGIYDRELAALAIKQASGDLVEAIFLLRA YRTTLPRLAVSLPLATDTMRLERRISAIYKDLPGGQVLGPTYDYTHRLLDFTLLASGETPLAPRGEEALPEPCAHVFDLL TQEQLALPEQDDGTPPDDITRNPPVYPCNRSARLQQLVRGDEGFLLALGYSTQRGYGRTHPFAAEIRTGYLTIAIQPEEL GFAIDIGEILLTECEMVNGFVDPVSEPPHFTRGYGLVFGRGERKAMSIALMDRALQSREYQEAVSSPAQDEEFVLSHADN VEAAGFVSHLKLPHYVDFQAELALLKRLRSEHLAASSALFTPQLSSSSLPSSSLPSSSSLPSSSQRQEPHHD
Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]
COG id: COG3626
COG function: function code P; Uncharacterized enzyme of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phnI family [H]
Homologues:
Organism=Escherichia coli, GI1790537, Length=353, Percent_Identity=75.070821529745, Blast_Score=538, Evalue=1e-154,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008773 [H]
Pfam domain/function: PF05861 PhnI [H]
EC number: NA
Molecular weight: Translated: 43018; Mature: 43018
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVAVKGGEKAIAAAHQLLENQRRGDTQIPAIDCEQIEQQLGLAVDRVMTEGGIYDRELA CEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH ALAIKQASGDLVEAIFLLRAYRTTLPRLAVSLPLATDTMRLERRISAIYKDLPGGQVLGP HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEECC TYDYTHRLLDFTLLASGETPLAPRGEEALPEPCAHVFDLLTQEQLALPEQDDGTPPDDIT CHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC RNPPVYPCNRSARLQQLVRGDEGFLLALGYSTQRGYGRTHPFAAEIRTGYLTIAIQPEEL CCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHEEECCEEEEEEEHHHC GFAIDIGEILLTECEMVNGFVDPVSEPPHFTRGYGLVFGRGERKAMSIALMDRALQSREY CEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH QEAVSSPAQDEEFVLSHADNVEAAGFVSHLKLPHYVDFQAELALLKRLRSEHLAASSALF HHHHCCCCCCCHHHHHCCCCCCHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHCC TPQLSSSSLPSSSLPSSSSLPSSSQRQEPHHD CCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCC >Mature Secondary Structure MYVAVKGGEKAIAAAHQLLENQRRGDTQIPAIDCEQIEQQLGLAVDRVMTEGGIYDRELA CEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH ALAIKQASGDLVEAIFLLRAYRTTLPRLAVSLPLATDTMRLERRISAIYKDLPGGQVLGP HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEECC TYDYTHRLLDFTLLASGETPLAPRGEEALPEPCAHVFDLLTQEQLALPEQDDGTPPDDIT CHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC RNPPVYPCNRSARLQQLVRGDEGFLLALGYSTQRGYGRTHPFAAEIRTGYLTIAIQPEEL CCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHEEECCEEEEEEEHHHC GFAIDIGEILLTECEMVNGFVDPVSEPPHFTRGYGLVFGRGERKAMSIALMDRALQSREY CEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH QEAVSSPAQDEEFVLSHADNVEAAGFVSHLKLPHYVDFQAELALLKRLRSEHLAASSALF HHHHCCCCCCCHHHHHCCCCCCHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHCC TPQLSSSSLPSSSLPSSSSLPSSSQRQEPHHD CCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]