| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is yhbP [C]
Identifier: 51594858
GI number: 51594858
Start: 597207
End: 597650
Strand: Direct
Name: yhbP [C]
Synonym: YPTB0506
Alternate gene names: 51594858
Gene position: 597207-597650 (Clockwise)
Preceding gene: 51594857
Following gene: 51594859
Centisome position: 12.59
GC content: 51.13
Gene sequence:
>444_bases GTGAATAATCCTGATGACGTGCTGTTGATCAACCGCTTCCTGCGCCAGCAACATGTGTTGACCTTATGCGCGGGCAGCGG CATGGATATGTGGTGCGCTAGCTGTTTTTACGTATTTGACGAAAATCAGATGGCGCTCTTTCTGATGACAGAAAAGCACA CCCGTCATAGCGAACTGATGTTGATAAACCCGCAAGTGGCTGGCACGGTTGCCACTCAATCCCGCACTATCGCCTTGATA AAGGGCATTCAATATCGTGGTGACATTAGTCTCTTGAGCGGCGATGCCGAACAGGCGGCCCGCAACCGCTATTGCCGTCG TTTTCCGGTAGCGAAGGTCTCTTCTGCCCCTCTCTGGCAACTCAATCTGCTGGAAATCAAAATGACGAATAACGCCCTCG GCTTTGGTAAAAAATTGCATTGGTCGCGTGTGGAGCCGTTATGA
Upstream 100 bases:
>100_bases GAACACGGGAAAGTTGAACGCGGGAAAATTGGCAGGTCAGATCAAATAGTAGAAGAAAATTTCATGTACACTGAACGTTG TTTTTACGCCGGAGAGTGAC
Downstream 100 bases:
>100_bases GTTTGGGCTGCAACTTTTCGATTATTAACTGTGAATAATGCTATTTTTGCCTGGTTTATTATTCTTATAAATCCCACTTC ACTCGCACCCTGACCGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MNNPDDVLLINRFLRQQHVLTLCAGSGMDMWCASCFYVFDENQMALFLMTEKHTRHSELMLINPQVAGTVATQSRTIALI KGIQYRGDISLLSGDAEQAARNRYCRRFPVAKVSSAPLWQLNLLEIKMTNNALGFGKKLHWSRVEPL
Sequences:
>Translated_147_residues MNNPDDVLLINRFLRQQHVLTLCAGSGMDMWCASCFYVFDENQMALFLMTEKHTRHSELMLINPQVAGTVATQSRTIALI KGIQYRGDISLLSGDAEQAARNRYCRRFPVAKVSSAPLWQLNLLEIKMTNNALGFGKKLHWSRVEPL >Mature_147_residues MNNPDDVLLINRFLRQQHVLTLCAGSGMDMWCASCFYVFDENQMALFLMTEKHTRHSELMLINPQVAGTVATQSRTIALI KGIQYRGDISLLSGDAEQAARNRYCRRFPVAKVSSAPLWQLNLLEIKMTNNALGFGKKLHWSRVEPL
Specific function: Unknown
COG id: COG3787
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0306 family [H]
Homologues:
Organism=Escherichia coli, GI1789544, Length=139, Percent_Identity=46.0431654676259, Blast_Score=148, Evalue=1e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012349 - InterPro: IPR009002 - InterPro: IPR011194 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16699; Mature: 16699
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNPDDVLLINRFLRQQHVLTLCAGSGMDMWCASCFYVFDENQMALFLMTEKHTRHSELM CCCCCHHHHHHHHHHHHHEEEEECCCCCHHHHEEEEEEECCCCEEEEEEECCCCCCCEEE LINPQVAGTVATQSRTIALIKGIQYRGDISLLSGDAEQAARNRYCRRFPVAKVSSAPLWQ EECCCCCEEEECCCEEEEEEECEEECCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEE LNLLEIKMTNNALGFGKKLHWSRVEPL EEEEEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNNPDDVLLINRFLRQQHVLTLCAGSGMDMWCASCFYVFDENQMALFLMTEKHTRHSELM CCCCCHHHHHHHHHHHHHEEEEECCCCCHHHHEEEEEEECCCCEEEEEEECCCCCCCEEE LINPQVAGTVATQSRTIALIKGIQYRGDISLLSGDAEQAARNRYCRRFPVAKVSSAPLWQ EECCCCCEEEECCCEEEEEEECEEECCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEE LNLLEIKMTNNALGFGKKLHWSRVEPL EEEEEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA