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The map label for this gene is glpB

Identifier: 51594565

GI number: 51594565

Start: 252594

End: 253868

Strand: Direct

Name: glpB

Synonym: YPTB0210

Alternate gene names: 51594565

Gene position: 252594-253868 (Clockwise)

Preceding gene: 51594564

Following gene: 51594566

Centisome position: 5.32

GC content: 52.55

Gene sequence:

>1275_bases
ATGAAATTTGATGTGATCATCATTGGCGGTGGCTTGGCCGGGTTGGCCTGTGGTATTCGTTTGGCCGAACAAGGTAAATA
TTGTGCGATTGTCAGTGCCGGACAAAATGCACTGCATTTTTCCTCTGGTTCTCTGGATCTCTTGGCAAAATTACCCGATG
GGCGGGCGGTCAGCCAGCCATTATCGGCACTCAGTGCATTAGCTGAATTAGCCCCTGAACATCCTTACAGTAAAATGCGG
AATATCACGCAATTGGATGAGTTGGTACAGGAAGCCGAGGCTCTATTACGGCGGTGCGGTCTGGATATCGTTGGGAGTAG
CGCTGAAAACCACTTACGTCTGACGCCATTGGGTAGCTGCCGTCCCACATGGTTGAGCCTGGCGGACATCCCGGTTGCAC
CGTTAAATGGCCCGCTGCCGTGGCAACGCGTGGCCGTGATTGGTATTGAAGGCTTTCTCGATTTTCAGCCACAGATGGTC
GCGAGTGCCTTACAGGATCAGGGTATTGATGCGACGGCAGATTATTTACATTTACCGGCGCTGGATCGGTTGCGGGATAA
TCCGAGCGAATTCAGAGCGGTAAACATCGCTCGAATACTGGATTTACCGGAAAATCGACAACCCTTAGCGGATGAGTTAT
CCCGCCTGTCATCTACCGCTGAAATGATTCTATTGCCCGCCTGTATTGGGCTGGATAAATCTGCGCCATTAGATGCCCTA
CGCGCCGTGGTCGGCAAACCTATTCAACTGTTGCCGACATTACCTCCTTCGCTGTTAGGGATGCGCTTACATCAGGCGCT
GCGCCATCGCTTCCAACAATTGGGGGGCTTAGTGATGCCGGGTGATGCGGTTTTGCGGGCGGAATTGGTTGATAACCGGA
TCACTGGCCTTTATAGCCGCAACCACGGTGATATTCCTCTACGAGCTGCGCAGATGGTACTGGCCAGTGGCAGTTTCTTC
AGCAATGGGCTGGTTGCTACCTTCGATAAAGTCTATGAACCGATACTGGATCTGGATATTTTATCACTGCCTCACCGCGC
AGACTGGAGCCACAGTAATCTGTTTGCGCCGCAGCCTTATCTGCAGTTTGGTGTCAACACGGATAACCATTTACGGCCGC
TGCGTGGCGGTGTCGCCCTAGAGAATCTACATGCCATCGGTGCCGTTCTGGGGGGATATGATCCGCTCCAGCAAGGTTGT
GGCGCGGGTGTTTCATTGACCAGTGCTGTGTTTGTCGCCGAACAGATTATCAGCGAGATGGCGGTGACATTATGA

Upstream 100 bases:

>100_bases
GGTGATGCATTGCGTGAGAGTGAGTTTACCCAGTGGGTCTATCAGGGACTCTGTGGTTTGGATGAGATTCCAGCCACCGT
GAATGCGCGGGAGAAACACG

Downstream 100 bases:

>100_bases
CAGGGTTGCCAAAGCATGATGCTAGCCCCGAACAGGATGGCACGATGGTGGGCGATAGCCGTCTCACGCGAGATAATAGC
TTCGAAAGCTGTATCAAATG

Product: anaerobic glycerol-3-phosphate dehydrogenase subunit B

Products: NA

Alternate protein names: Anaerobic G-3-P dehydrogenase subunit B; Anaerobic G3Pdhase B [H]

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MKFDVIIIGGGLAGLACGIRLAEQGKYCAIVSAGQNALHFSSGSLDLLAKLPDGRAVSQPLSALSALAELAPEHPYSKMR
NITQLDELVQEAEALLRRCGLDIVGSSAENHLRLTPLGSCRPTWLSLADIPVAPLNGPLPWQRVAVIGIEGFLDFQPQMV
ASALQDQGIDATADYLHLPALDRLRDNPSEFRAVNIARILDLPENRQPLADELSRLSSTAEMILLPACIGLDKSAPLDAL
RAVVGKPIQLLPTLPPSLLGMRLHQALRHRFQQLGGLVMPGDAVLRAELVDNRITGLYSRNHGDIPLRAAQMVLASGSFF
SNGLVATFDKVYEPILDLDILSLPHRADWSHSNLFAPQPYLQFGVNTDNHLRPLRGGVALENLHAIGAVLGGYDPLQQGC
GAGVSLTSAVFVAEQIISEMAVTL

Sequences:

>Translated_424_residues
MKFDVIIIGGGLAGLACGIRLAEQGKYCAIVSAGQNALHFSSGSLDLLAKLPDGRAVSQPLSALSALAELAPEHPYSKMR
NITQLDELVQEAEALLRRCGLDIVGSSAENHLRLTPLGSCRPTWLSLADIPVAPLNGPLPWQRVAVIGIEGFLDFQPQMV
ASALQDQGIDATADYLHLPALDRLRDNPSEFRAVNIARILDLPENRQPLADELSRLSSTAEMILLPACIGLDKSAPLDAL
RAVVGKPIQLLPTLPPSLLGMRLHQALRHRFQQLGGLVMPGDAVLRAELVDNRITGLYSRNHGDIPLRAAQMVLASGSFF
SNGLVATFDKVYEPILDLDILSLPHRADWSHSNLFAPQPYLQFGVNTDNHLRPLRGGVALENLHAIGAVLGGYDPLQQGC
GAGVSLTSAVFVAEQIISEMAVTL
>Mature_424_residues
MKFDVIIIGGGLAGLACGIRLAEQGKYCAIVSAGQNALHFSSGSLDLLAKLPDGRAVSQPLSALSALAELAPEHPYSKMR
NITQLDELVQEAEALLRRCGLDIVGSSAENHLRLTPLGSCRPTWLSLADIPVAPLNGPLPWQRVAVIGIEGFLDFQPQMV
ASALQDQGIDATADYLHLPALDRLRDNPSEFRAVNIARILDLPENRQPLADELSRLSSTAEMILLPACIGLDKSAPLDAL
RAVVGKPIQLLPTLPPSLLGMRLHQALRHRFQQLGGLVMPGDAVLRAELVDNRITGLYSRNHGDIPLRAAQMVLASGSFF
SNGLVATFDKVYEPILDLDILSLPHRADWSHSNLFAPQPYLQFGVNTDNHLRPLRGGVALENLHAIGAVLGGYDPLQQGC
GAGVSLTSAVFVAEQIISEMAVTL

Specific function: Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor [H]

COG id: COG3075

COG function: function code E; Anaerobic glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Loosely Bound To The Cytoplasm Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the anaerobic G-3-P dehydrogenase subunit B family [H]

Homologues:

Organism=Escherichia coli, GI1788575, Length=416, Percent_Identity=49.2788461538462, Blast_Score=363, Evalue=1e-101,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003953
- InterPro:   IPR009158 [H]

Pfam domain/function: PF00890 FAD_binding_2 [H]

EC number: =1.1.5.3 [H]

Molecular weight: Translated: 45505; Mature: 45505

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFDVIIIGGGLAGLACGIRLAEQGKYCAIVSAGQNALHFSSGSLDLLAKLPDGRAVSQP
CEEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCEEEEEECCCCCHHHHH
LSALSALAELAPEHPYSKMRNITQLDELVQEAEALLRRCGLDIVGSSAENHLRLTPLGSC
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEEECCCC
RPTWLSLADIPVAPLNGPLPWQRVAVIGIEGFLDFQPQMVASALQDQGIDATADYLHLPA
CCCCEECCCCCCCCCCCCCCHHHEEEEEECCHHCCCHHHHHHHHHHCCCCCCHHHEECCC
LDRLRDNPSEFRAVNIARILDLPENRQPLADELSRLSSTAEMILLPACIGLDKSAPLDAL
HHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
RAVVGKPIQLLPTLPPSLLGMRLHQALRHRFQQLGGLVMPGDAVLRAELVDNRITGLYSR
HHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHCCC
NHGDIPLRAAQMVLASGSFFSNGLVATFDKVYEPILDLDILSLPHRADWSHSNLFAPQPY
CCCCCCHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCH
LQFGVNTDNHLRPLRGGVALENLHAIGAVLGGYDPLQQGCGAGVSLTSAVFVAEQIISEM
HEECCCCCCCCCHHHCCCHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHH
AVTL
HHCC
>Mature Secondary Structure
MKFDVIIIGGGLAGLACGIRLAEQGKYCAIVSAGQNALHFSSGSLDLLAKLPDGRAVSQP
CEEEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCEEEEEECCCCCHHHHH
LSALSALAELAPEHPYSKMRNITQLDELVQEAEALLRRCGLDIVGSSAENHLRLTPLGSC
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEEECCCC
RPTWLSLADIPVAPLNGPLPWQRVAVIGIEGFLDFQPQMVASALQDQGIDATADYLHLPA
CCCCEECCCCCCCCCCCCCCHHHEEEEEECCHHCCCHHHHHHHHHHCCCCCCHHHEECCC
LDRLRDNPSEFRAVNIARILDLPENRQPLADELSRLSSTAEMILLPACIGLDKSAPLDAL
HHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
RAVVGKPIQLLPTLPPSLLGMRLHQALRHRFQQLGGLVMPGDAVLRAELVDNRITGLYSR
HHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHCCC
NHGDIPLRAAQMVLASGSFFSNGLVATFDKVYEPILDLDILSLPHRADWSHSNLFAPQPY
CCCCCCHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCCCH
LQFGVNTDNHLRPLRGGVALENLHAIGAVLGGYDPLQQGCGAGVSLTSAVFVAEQIISEM
HEECCCCCCCCCHHHCCCHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHH
AVTL
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA