Click here to switch to the map view.

The map label for this gene is cyaY

Identifier: 51594543

GI number: 51594543

Start: 228439

End: 228762

Strand: Reverse

Name: cyaY

Synonym: YPTB0188

Alternate gene names: 51594543

Gene position: 228762-228439 (Counterclockwise)

Preceding gene: 51594550

Following gene: 51594542

Centisome position: 4.82

GC content: 48.46

Gene sequence:

>324_bases
ATGAACGACAGCGAGTTTCATCAGTTAGCCGATCAATTGATGCTTTACATTGAAGAGACACTGGATGGTTTTACTGGCGA
TAGTGATATCGATTATGAAACCAATGGCGGGGTGATGACCCTGACCTTCGAGAATGGCAGCAAGATTGTGATCAACCGTC
AGGAGCCCTTACATCAGGTATGGCTGGCGACCAAAGCGGGCGGCTACCACTTTAATTATCGTGACGGCCACTGGTATTGC
TCACGCAGTGGCGAAGAATTTTTTGCTAAATTGTCCGAAGCGGCGACCACACAGGCGGGTGAAGAAGTCAGTTTCAGTGA
GTAA

Upstream 100 bases:

>100_bases
AAGCGCATTGAAAACCTGTTAAAGCGCATTAAACCTGTCACTCATGCGTCCAAGCTCTCTATAATCGCAGGTGGATCATG
AAAAGCAATAGGAATCGAAT

Downstream 100 bases:

>100_bases
AATCGCAATACCAGCCGAGCAACTCGGTTGGTATTCAATTGGAACACGCTAAATATATCCTTTCGGCATCTAAAAAGTCC
GGTCAACACCCGATTACTTA

Product: frataxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MNDSEFHQLADQLMLYIEETLDGFTGDSDIDYETNGGVMTLTFENGSKIVINRQEPLHQVWLATKAGGYHFNYRDGHWYC
SRSGEEFFAKLSEAATTQAGEEVSFSE

Sequences:

>Translated_107_residues
MNDSEFHQLADQLMLYIEETLDGFTGDSDIDYETNGGVMTLTFENGSKIVINRQEPLHQVWLATKAGGYHFNYRDGHWYC
SRSGEEFFAKLSEAATTQAGEEVSFSE
>Mature_107_residues
MNDSEFHQLADQLMLYIEETLDGFTGDSDIDYETNGGVMTLTFENGSKIVINRQEPLHQVWLATKAGGYHFNYRDGHWYC
SRSGEEFFAKLSEAATTQAGEEVSFSE

Specific function: Not Known; Its Knock Out Does Not Affect Cellular Iron Content. [C]

COG id: COG1965

COG function: function code P; Protein implicated in iron transport, frataxin homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the frataxin family

Homologues:

Organism=Escherichia coli, GI1790239, Length=105, Percent_Identity=72.3809523809524, Blast_Score=141, Evalue=7e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CYAY_YERP3 (A7FD72)

Other databases:

- EMBL:   CP000720
- RefSeq:   YP_001399200.1
- ProteinModelPortal:   A7FD72
- SMR:   A7FD72
- STRING:   A7FD72
- GeneID:   5385486
- GenomeReviews:   CP000720_GR
- KEGG:   ypi:YpsIP31758_0203
- eggNOG:   COG1965
- HOGENOM:   HBG687517
- OMA:   EPLHQIW
- ProtClustDB:   PRK00446
- BioCyc:   YPSE349747:YPSIP31758_0203-MONOMER
- HAMAP:   MF_00142
- InterPro:   IPR002908
- InterPro:   IPR020895
- Gene3D:   G3DSA:3.30.920.10
- TIGRFAMs:   TIGR03421

Pfam domain/function: PF01491 Frataxin_Cyay; SSF55387 Frataxin_like

EC number: NA

Molecular weight: Translated: 12126; Mature: 12126

Theoretical pI: Translated: 4.09; Mature: 4.09

Prosite motif: PS01344 FRATAXIN_1; PS50810 FRATAXIN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDSEFHQLADQLMLYIEETLDGFTGDSDIDYETNGGVMTLTFENGSKIVINRQEPLHQV
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCEEEEEECCCCEEEEECCCCCHHE
WLATKAGGYHFNYRDGHWYCSRSGEEFFAKLSEAATTQAGEEVSFSE
EEEECCCCEEEECCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNDSEFHQLADQLMLYIEETLDGFTGDSDIDYETNGGVMTLTFENGSKIVINRQEPLHQV
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCEEEEEECCCCEEEEECCCCCHHE
WLATKAGGYHFNYRDGHWYCSRSGEEFFAKLSEAATTQAGEEVSFSE
EEEECCCCEEEECCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA