Click here to switch to the map view.

The map label for this gene is F17a-A [H]

Identifier: 51594516

GI number: 51594516

Start: 190727

End: 191257

Strand: Reverse

Name: F17a-A [H]

Synonym: YPTB0160

Alternate gene names: 51594516

Gene position: 191257-190727 (Counterclockwise)

Preceding gene: 51594517

Following gene: 51594515

Centisome position: 4.03

GC content: 43.13

Gene sequence:

>531_bases
ATGAAAAAAATTACTTTAGCTATCGCGTTATTCTCGGCATCTACAACGGTTGCCATGTCTGCCAGTAATAATACGATTAC
GTTCCAAGGGGAAGTCACAGCACAAACCTGTTCTGTTACCGTAAACGGCCTTGAAGCAAATCCAGTTGTCTTGTTGCCTA
CAGTATCAAGTAGCGATTTAGACGCTTCCGGCCAAACTAAAGGCAAAACAACCTTTACGCTAGGTGTGTCTGGCTGTACA
TCAGGATCAGATGATCTTGATATCAAAACTGTTTTCATCGGTAGCCTGGTTACTGCTACTGGTAATTTACAAAATACAGG
TACCGCAGGGAACGTTGAACTTCAATTATTGAAGGATGCCACGACAACAACGGGTATCGACCTAAATAGTGGTTTGGCAC
AAGACGGTATCGTATTGCTAGCAGGTGATACATCTGCGGAGCATGATTTTGCTGTTCAGTATTATGCCACTGGGCAATCA
ACACCAGGGTCTGTCATTGCATCTGTACAGTATGCTGTTTCTTACTTGTAA

Upstream 100 bases:

>100_bases
TGTTGGAATATATATTCACTCAATCAAATTCCCCATTCGGATTTTATTAAAATCCGAATGGGGAATTAACTCCATTTCAA
TGATTACATCGGGGTTTTAA

Downstream 100 bases:

>100_bases
TAAATGTATTTATTACCGGGTGGTATAACCACTCGGTAAATGACTTCAGAAGGTACGCTCATCATGCTTAGTATATATGC
CCGCCACTATCATTATCTGT

Product: fimbrial protein

Products: NA

Alternate protein names: F17 fimbrial adhesive antigen; F17 pilin [H]

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MKKITLAIALFSASTTVAMSASNNTITFQGEVTAQTCSVTVNGLEANPVVLLPTVSSSDLDASGQTKGKTTFTLGVSGCT
SGSDDLDIKTVFIGSLVTATGNLQNTGTAGNVELQLLKDATTTTGIDLNSGLAQDGIVLLAGDTSAEHDFAVQYYATGQS
TPGSVIASVQYAVSYL

Sequences:

>Translated_176_residues
MKKITLAIALFSASTTVAMSASNNTITFQGEVTAQTCSVTVNGLEANPVVLLPTVSSSDLDASGQTKGKTTFTLGVSGCT
SGSDDLDIKTVFIGSLVTATGNLQNTGTAGNVELQLLKDATTTTGIDLNSGLAQDGIVLLAGDTSAEHDFAVQYYATGQS
TPGSVIASVQYAVSYL
>Mature_176_residues
MKKITLAIALFSASTTVAMSASNNTITFQGEVTAQTCSVTVNGLEANPVVLLPTVSSSDLDASGQTKGKTTFTLGVSGCT
SGSDDLDIKTVFIGSLVTATGNLQNTGTAGNVELQLLKDATTTTGIDLNSGLAQDGIVLLAGDTSAEHDFAVQYYATGQS
TPGSVIASVQYAVSYL

Specific function: Fimbriae (also called pili), polar filaments radiating from the surface of the bacterium to a length of 0.5-1.5 micrometers and numbering 100-300 per cell, enable bacteria to colonize the epithelium of specific host organs [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 17867; Mature: 17867

Theoretical pI: Translated: 3.99; Mature: 3.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKITLAIALFSASTTVAMSASNNTITFQGEVTAQTCSVTVNGLEANPVVLLPTVSSSDL
CCEEEEEEEEEECCEEEEEECCCCEEEEEEEEEEEEEEEEEECCCCCCEEEEEECCCCCC
DASGQTKGKTTFTLGVSGCTSGSDDLDIKTVFIGSLVTATGNLQNTGTAGNVELQLLKDA
CCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCEEEEEEECC
TTTTGIDLNSGLAQDGIVLLAGDTSAEHDFAVQYYATGQSTPGSVIASVQYAVSYL
CCCCCEECCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MKKITLAIALFSASTTVAMSASNNTITFQGEVTAQTCSVTVNGLEANPVVLLPTVSSSDL
CCEEEEEEEEEECCEEEEEECCCCEEEEEEEEEEEEEEEEEECCCCCCEEEEEECCCCCC
DASGQTKGKTTFTLGVSGCTSGSDDLDIKTVFIGSLVTATGNLQNTGTAGNVELQLLKDA
CCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCEEEEEEECC
TTTTGIDLNSGLAQDGIVLLAGDTSAEHDFAVQYYATGQSTPGSVIASVQYAVSYL
CCCCCEECCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2897333 [H]