| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is imm2
Identifier: 51594507
GI number: 51594507
Start: 181856
End: 182110
Strand: Direct
Name: imm2
Synonym: YPTB0151
Alternate gene names: 51594507
Gene position: 181856-182110 (Clockwise)
Preceding gene: 51594506
Following gene: 51594508
Centisome position: 3.83
GC content: 34.12
Gene sequence:
>255_bases ATGGAAGATAAAAGTATTTGTGATTACACTGAATCTGAATTTTTAGAATTAGTAAAGGAGCTTTTTAATGTGGAAAAAAC GACTGAAGAAGAAGATATTAACAATCTTATTGAGTTTAAACGATTATGTGAGCATCCCGCTGGTTCTGACCTTATCTTCT ATCCAGATAATAATAGAGAAGACAGCCCAGAGGGTGTAGTGAAGGAAGTAAAAAAATGGCGAGCTGAAAACGGTAAACCC GGTTTCAAAAAATAA
Upstream 100 bases:
>100_bases CTGAAGCCTATTAGTAAAAATGGTGCTGTTTACCACATTGAAAATATTAGAGTATTAACTCCGAAAAGGCATATAGATAT TCATAAAGGAGCAGAATAAT
Downstream 100 bases:
>100_bases ATAAAATATATAATCCAAACCGCCTTCTGGTGGTTTGGATTTGTAAATATAATTAGTAACGTAAATATTAATTCAATAAT TTATTTTCTCATCTTGGGAG
Product: pyocin S2 immunity protein
Products: NA
Alternate protein names: ImmE2; Microcin-E2 immunity protein [H]
Number of amino acids: Translated: 84; Mature: 84
Protein sequence:
>84_residues MEDKSICDYTESEFLELVKELFNVEKTTEEEDINNLIEFKRLCEHPAGSDLIFYPDNNREDSPEGVVKEVKKWRAENGKP GFKK
Sequences:
>Translated_84_residues MEDKSICDYTESEFLELVKELFNVEKTTEEEDINNLIEFKRLCEHPAGSDLIFYPDNNREDSPEGVVKEVKKWRAENGKP GFKK >Mature_84_residues MEDKSICDYTESEFLELVKELFNVEKTTEEEDINNLIEFKRLCEHPAGSDLIFYPDNNREDSPEGVVKEVKKWRAENGKP GFKK
Specific function: This protein is able to protect a cell, which harbors the plasmid ColE2 encoding colicin E2, against colicin E2 [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the colicins ColE2/ColE8/ColE9 and pyocins S1/S2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000290 - ProDom: PD007225 [H]
Pfam domain/function: PF01320 Colicin_Pyocin [H]
EC number: NA
Molecular weight: Translated: 9841; Mature: 9841
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDKSICDYTESEFLELVKELFNVEKTTEEEDINNLIEFKRLCEHPAGSDLIFYPDNNRE CCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCC DSPEGVVKEVKKWRAENGKPGFKK CCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MEDKSICDYTESEFLELVKELFNVEKTTEEEDINNLIEFKRLCEHPAGSDLIFYPDNNRE CCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCC DSPEGVVKEVKKWRAENGKPGFKK CCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6095211; 2987833; 3892228 [H]