| Definition | Yersinia pseudotuberculosis IP 32953, complete genome. |
|---|---|
| Accession | NC_006155 |
| Length | 4,744,671 |
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The map label for this gene is 51594498
Identifier: 51594498
GI number: 51594498
Start: 172795
End: 173259
Strand: Reverse
Name: 51594498
Synonym: YPTB0140
Alternate gene names: NA
Gene position: 173259-172795 (Counterclockwise)
Preceding gene: 51594499
Following gene: 51594497
Centisome position: 3.65
GC content: 35.48
Gene sequence:
>465_bases ATGAAAGCAAAAAGTAAAAAAATCATCTGCGCGCTATTACTGCTTGGCAGCATTTTACTGGGTTATTTCTTCTGGTTATC GTTGCGCCCGGTGGAAATTGTCGCTATTCATAAGGACGGGAATTTTAGTGCTGTTTTAGTGAGAGATTTTCCGGTTACTG ACAAAGGTAAAATAAATTGGTGGTTAGAAAATAAAAGTAGATTAAAAGACAAATACAATATTCCTAACCCTGCCCCTGAT GGCTTTTTTTCTATCACTTTTTGGGATTTTGGTGAGGGCTATAAAGAGGAAGGGAAATACGATAGACGATGTTTTGAGGA TATGAAAACTGATAAGAATTGTATAGATAAAAAGTCAGTATTCTCTGTAAGGCGCATCAATAATGACCGTATATTATTTA TTACTTATGAGGGACGATACTCACTAAATGATAACGGTGAGATAATTAAAATCAAGCGCAAGTGA
Upstream 100 bases:
>100_bases GTTAAAATGAAACACGAATAAAATTTCGCCTCTTATGTAGTTTAGCCTCAAGCATTTATGACCAATATGGAAGCCACAAT TGAGATTACCGGGGGCCGTA
Downstream 100 bases:
>100_bases GATTGCTGGGGGCCGCAATGAAAGTAAAAAACAAAAAAAATCTCTGTGCACTATTACTGATTGGCAGCGTTCTACTGGGT TATTTCTTCTGGTTATCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MKAKSKKIICALLLLGSILLGYFFWLSLRPVEIVAIHKDGNFSAVLVRDFPVTDKGKINWWLENKSRLKDKYNIPNPAPD GFFSITFWDFGEGYKEEGKYDRRCFEDMKTDKNCIDKKSVFSVRRINNDRILFITYEGRYSLNDNGEIIKIKRK
Sequences:
>Translated_154_residues MKAKSKKIICALLLLGSILLGYFFWLSLRPVEIVAIHKDGNFSAVLVRDFPVTDKGKINWWLENKSRLKDKYNIPNPAPD GFFSITFWDFGEGYKEEGKYDRRCFEDMKTDKNCIDKKSVFSVRRINNDRILFITYEGRYSLNDNGEIIKIKRK >Mature_154_residues MKAKSKKIICALLLLGSILLGYFFWLSLRPVEIVAIHKDGNFSAVLVRDFPVTDKGKINWWLENKSRLKDKYNIPNPAPD GFFSITFWDFGEGYKEEGKYDRRCFEDMKTDKNCIDKKSVFSVRRINNDRILFITYEGRYSLNDNGEIIKIKRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18084; Mature: 18084
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAKSKKIICALLLLGSILLGYFFWLSLRPVEIVAIHKDGNFSAVLVRDFPVTDKGKINW CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEEECCCCCCCCEEE WLENKSRLKDKYNIPNPAPDGFFSITFWDFGEGYKEEGKYDRRCFEDMKTDKNCIDKKSV EECCCHHCHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCHHHCCHHHH FSVRRINNDRILFITYEGRYSLNDNGEIIKIKRK EEEEEECCCEEEEEEECCEEEECCCCCEEEEECC >Mature Secondary Structure MKAKSKKIICALLLLGSILLGYFFWLSLRPVEIVAIHKDGNFSAVLVRDFPVTDKGKINW CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEEECCCCCCCCEEE WLENKSRLKDKYNIPNPAPDGFFSITFWDFGEGYKEEGKYDRRCFEDMKTDKNCIDKKSV EECCCHHCHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCHHHCCHHHH FSVRRINNDRILFITYEGRYSLNDNGEIIKIKRK EEEEEECCCEEEEEEECCEEEECCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA