Definition Desulfotalea psychrophila LSv54, complete genome.
Accession NC_006138
Length 3,523,383

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Identifier: 51245574

GI number:

Start: 1937172

End: 1938707

Strand: Reverse

Name: Not Available

Synonym: DP1722

Alternate gene names: NA

Gene position: NA

Preceding gene: 51245575

Following gene: 51245573

Centisome position: NA

GC content: NA

Gene sequence:

>1536_bases
ATGAATGAAATTTGCCCCCCAGAGGAGAACGCAACCCAAAGAAATATTTGCTACACCTCTTTTTTCTGGGTTGTCTTTCT
CGTTATCTCCTCCTGCCTGCCCCTACTTCTTGCTCCAAAGGCAAGTGCAAAATATATAGGCATTGCCTTTCATTTTATAA
CAAACGAATTAGGTTGGCTCTATATGCTCGCAGGCCTTGTCTCCTTTATCTTTGTCCTTTGGCTCGCCTTTGGCCCCCTC
GGGGATAAGAAACTTGGCGAAGAGAAGGAATATTCAACATTTTCATGGATTGGCATGCTTATCTGTGCTGGAGTCGGGGC
GGGCGTACTCTTTGGTGGCGCCATAGAGTGGGCCTACTATATGAGCTATCCACTCCAAGGAGAGACGGTTGGCTCAAAAA
AGGCTATCGAATGGGCAGGCGCCTATGGCCTCTTTCATTGGGGGCCGGTATGTTGGGCCATATATGCAACTCTGGCTGTC
CCCATGGCCTATAACTATTATGTGAAGAAGGTCCCCATTCTCAATATTGCCCAAACCTGTAAAGGCGTACTGGGCGAGAG
GGCCAATCACTGGCCGGGCAAGGTCATTAATATTTTCTTCATGGCAGGCCTTGTGGCAGGTTCCGCCACCGCTCTGGGCA
TTGGTGTACCCGTCATCGCCGCCTGTCTGGTCTCTGTCTTTGGCTTTGCCCCCTCCTTTCAACTGGAGTTTTTGACCCTG
TTGGGAATTACCATGCTCTTTTGCATGACCTCCTATCTAGGATTAAAAAATGGCCTGAGCAAACTCTCCGATCTCAATGT
CTATGCTGCCCTTTTCCTCCTCCTCTTTGTCCTGATAGTCGGTCCCAGCGTTTTCATCATAGAGACCTCCCTTGCCTCTC
TTGGCCTTTTGACCACAGAAATAGTGCGGATGGCAACCTGGATGGATCCCTCAAGTGAAACAAGCTTTGTTAAAGATTGG
ACGGTGTTCTACTATGCCTGGTTTGTGGCCTATGCCCCATTTATGGGCCTCTTTATAGCAAAAATATCCCGGGGCAGAAC
GGTACGTGAAGTGGTTCTGGGCCCCGTCATCCTTGCCTCCTTAGGCTGTGGCCTCTTCTATCTAATCTTTGGTAATTTTG
GCCTTCATCTGCAACTAACAGGACAGCTGGATGTGGTGGAACTTGTTAAGACCAACAAGGGGGCAACAGTGATCATGCAA
ATTGCCGACTTCCTTCCCTGGGCCCCTCTCTATAAACTGCTCTACGCTCTGGTAATGGCCATCTCCATGGCAACAACCCT
GGATGCAGTCTCCTTTGCCCTCAGCGCATCAACGACTAAACAGTTACAACCGGATGAAGAACCGGCTCACTGGAATCGAC
TCTTCTGGGCTATTGTCCTGGGATTTATTCCAACGGGAATGCTCTTTATCGATGGACCCCTATCCATCTTACAAACAGCA
TCTATCGTTGTTGGTCTACCGGTACTCTTTATCATATGGCTCGGAGTCTACTCATTTCTCAAGGACTATTTACGAGATGG
CTGGCTAACAGATTAA

Upstream 100 bases:

>100_bases
ATATTGCCACACCGGACAGAAAAAGCATAAGGTACTCTCCAATACCAAATAGGGATCCATCCCTACCCATTTTTTTACAA
TAACTATTCTGAGCCCCGTT

Downstream 100 bases:

>100_bases
TCGCAGAGGAAAAAAGATATGAAAACAATTGCCGTAGAAAATGCAGTCGGTACTATTTTATGCCACGACGTCACCAGAAT
AATTCCCGGAAAGACCAAGG

Product: transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>511_residues
MNEICPPEENATQRNICYTSFFWVVFLVISSCLPLLLAPKASAKYIGIAFHFITNELGWLYMLAGLVSFIFVLWLAFGPL
GDKKLGEEKEYSTFSWIGMLICAGVGAGVLFGGAIEWAYYMSYPLQGETVGSKKAIEWAGAYGLFHWGPVCWAIYATLAV
PMAYNYYVKKVPILNIAQTCKGVLGERANHWPGKVINIFFMAGLVAGSATALGIGVPVIAACLVSVFGFAPSFQLEFLTL
LGITMLFCMTSYLGLKNGLSKLSDLNVYAALFLLLFVLIVGPSVFIIETSLASLGLLTTEIVRMATWMDPSSETSFVKDW
TVFYYAWFVAYAPFMGLFIAKISRGRTVREVVLGPVILASLGCGLFYLIFGNFGLHLQLTGQLDVVELVKTNKGATVIMQ
IADFLPWAPLYKLLYALVMAISMATTLDAVSFALSASTTKQLQPDEEPAHWNRLFWAIVLGFIPTGMLFIDGPLSILQTA
SIVVGLPVLFIIWLGVYSFLKDYLRDGWLTD

Sequences:
NA

Specific function: NA

COG id: COG1292

COG function: function code M; Choline-glycine betaine transporter

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA