Definition Desulfotalea psychrophila LSv54, complete genome.
Accession NC_006138
Length 3,523,383

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Identifier: 51245540

GI number:

Start: 1888545

End: 1890317

Strand: Reverse

Name: Not Available

Synonym: DP1688

Alternate gene names: NA

Gene position: NA

Preceding gene: 51245547

Following gene: 51245538

Centisome position: NA

GC content: NA

Gene sequence:

>1773_bases
ATGGAAGAGGTCAACCTTGAAGAGCTCTGGGAGCTTACCACCGACGAGCCCACCTCCGTATTTTCACCTGCCTTTCTGGC
AGAACTTGCCTTTGGCAAAGAGGTCGATGACGACCTCATTTGCTCCTTTCTACGTTGTATTTTTACCGACAAGCTCTTCT
TTAAATACAAAGAGGGTAGAGTTCGAATCAACAACGCTGAACAGATTGCACAGCTTCGTATGCAGCAGGTTGCAGAGGAA
AAGAAGGCTCGTCTGGTAAAGGACGGTAGCCAACTCCTGCGTAGCCTCTACGACTTGCAAAACGTTGAAGAATTGGAAAA
TGAATACGGCAGTTTCTTTACCGAATCACTCGACATTATTCGAGATTTCTACCTGTTTGGTAGCGATTTTAAACAGGCGG
CAACGGCAAAGCTACTGCTCAAGGAGGCCTCATTAAACCATCCCCATGCCCCCTTTTCTCTTATGGAGAAGTCTGGTCGT
TGGAGTTCCCACGAGAACATCCCACTTCTACGCAGTGAGATTCCGGTAGCCTTCTCTCTGGCGGCACGACAACAGGCCGA
ACAGATCCTCCAGACAGATATGGACAAGCTCTTTGATGATCCCGCCCGTATTGACTATACCCACCTCAAGCCAATCACCA
TTGATGGCCCCACCACCCAGGATTTTGACGATGCCCTGACCATTGAAAAGGATGGGGAAAATTACCTGGTCGGTGTACAT
ATTTCAGATGTTGCCCACTATGTTCGCCCTGGAGACCCTCTCTTTCAGGAGGCTATGCAACGCGGCACATCCATCTATTT
TCCCGAGGGACAGATCCCCATGTTACCCCGCCATCTCTCCCAAGGAATATGCAGTCTTATTCAAGGTGAGATCAGGGCAG
CACTCAGCTTTATGATCCTGCTCTCCCCCGAGGCCGAAGTGCTTCGGGTTCGCATCCGCCCCTCTATTATCAAAGTGGCC
CGTCGCCTCACCTATGAGGAGGCCGACAGCATGCTAAAAGATGATAACGAAATCAAGATGCTCAACAAGGTTAGCCAGAG
GCTACGCCAGAGGCGTATTGATAATGGCGCACTCCTTCTCCCCTTTCCCGATGTAAATATCTTCATTGACAATCAGGGCA
AGGTTCATGTTCAACTAGCAAAAAGTAATACCCCGGCCCGGGTCCTTGTCTCAGAGATGATGATTCTTGCCAATAGCGAA
AGTGCCAGATATGTCGCAGACCGTATGGTTCCCGGTATCTACAGATCACAGCCAGAGCTTAAAAACCGTATCGTTCATGG
CACAGACGATGATCTCTTCCAGAACACCAAACAACGCAAACAGTTGCCCCGCGGAGAACTCTCCACCGTGGCAAAATCCC
ATAGCGGTCTGGGTGTCAGTCAATACACCACCATCACCTCACCCATCAGAAGATTACTCGACTTGGTAATGCAACACCAA
CTGCACTCCATTGTTCGCAGACAGGAACCACGTTTTACTGAAGATATGTGTTCTGATTTCACAGCGGTAATGTCAAGAAC
ACTATCGCGGGCTAATAATGTCCGCCACCAACGCCATCGTTACTGGCTTCTTTGTTATCTTGAAGAACGCAAGGGCCAAT
ACCTGGAGGCCCTGGTCATCCAGGCCGGCCCCAAGAGAACTAACCTGCTCTTAACCGACATCCTTCTTGATGTCGAACTC
CCTGCCACGGGCGGAATAAGCCCCGGACAGAGAGTGAAGATACGAGTGGCAAAGGCTGATGCCCTAGACAATGTCCTTCG
CTTTGAGTGGTGA

Upstream 100 bases:

>100_bases
CAGGGTAATCCACTGTTCTACCAGCTCATATGACGTAGGCATCGGCCGGGCAGAGATCTCGCAAAAGCTGCTTGAAACAA
CAGCTAAACGAGCAGAGCTG

Downstream 100 bases:

>100_bases
TAGTATTACTATTACTGACCGGCAATAAGATGCCAGGCAATAGCCCACATGGTTAAACAGACAAGAGCGTCCAAAACCCG
CCAGGCTGTGGGATTTTTAA

Product: ribonuclease R

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>590_residues
MEEVNLEELWELTTDEPTSVFSPAFLAELAFGKEVDDDLICSFLRCIFTDKLFFKYKEGRVRINNAEQIAQLRMQQVAEE
KKARLVKDGSQLLRSLYDLQNVEELENEYGSFFTESLDIIRDFYLFGSDFKQAATAKLLLKEASLNHPHAPFSLMEKSGR
WSSHENIPLLRSEIPVAFSLAARQQAEQILQTDMDKLFDDPARIDYTHLKPITIDGPTTQDFDDALTIEKDGENYLVGVH
ISDVAHYVRPGDPLFQEAMQRGTSIYFPEGQIPMLPRHLSQGICSLIQGEIRAALSFMILLSPEAEVLRVRIRPSIIKVA
RRLTYEEADSMLKDDNEIKMLNKVSQRLRQRRIDNGALLLPFPDVNIFIDNQGKVHVQLAKSNTPARVLVSEMMILANSE
SARYVADRMVPGIYRSQPELKNRIVHGTDDDLFQNTKQRKQLPRGELSTVAKSHSGLGVSQYTTITSPIRRLLDLVMQHQ
LHSIVRRQEPRFTEDMCSDFTAVMSRTLSRANNVRHQRHRYWLLCYLEERKGQYLEALVIQAGPKRTNLLLTDILLDVEL
PATGGISPGQRVKIRVAKADALDNVLRFEW

Sequences:
NA

Specific function: NA

COG id: COG0557

COG function: function code K; Exoribonuclease R

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA