Definition Desulfotalea psychrophila LSv54, complete genome.
Accession NC_006138
Length 3,523,383

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 51245527

GI number:

Start: 1873963

End: 1877190

Strand: Reverse

Name: Not Available

Synonym: DP1675

Alternate gene names: NA

Gene position: NA

Preceding gene: 51245532

Following gene: 51245526

Centisome position: NA

GC content: NA

Gene sequence:

>3228_bases
ATGGGACAACACGCCTTGGTGTCTTCTTTGACCAAACCCATCGACAATATGTCCAATACGTTGATATTCCACAAAATTTT
GTCAATGCCCTCGTTGCCTGCCGAAGACAACCGTTTTTTTGACCATTTCGGTTTTGACGTCATGGGGATAAGCCGGGCAA
TGATAACAAATGTCCGAGCAGGCAGAATTGTTCAAGGTGGAAGCACCCTCACCCAGCAGACGGCAAAAAACCTCTTTAAA
CGTGCAGATAGATCAATCAAAGAAAAATTAAAAGAACTACTCTTTGCCCTACGCCTGGAATATCACTACTCTAAGGAACA
GATTTTTGAATTTTATGCCAACCAATTTTATGTGAGCGGTAATGGGCACGGCCTCGGCATTGCTGCCCGCTATTATTTTA
ATAAATCGGCTTCTGAACTCAATCTGGTTGAATCTGCCTTTATTGCAGGAAGCGTCAAGGGGCCAAACTATTATAACCCC
TTTACCAAGAAAACGACAGAGTCCATAGAAGAGGCAAAAAAACGAGCCAATATACGTCTTGCCTATGTGCTGAGGAAAAT
GAAGAAGGAGGGGATGATAGGCGAAGATGAATTTAACCGTGCCCTTGCCGAGGGAGTTCCCTTTAACAAGGGACAGTTTG
GCTATGAGCTTGACTATACCATGGAGCTGGTAAGAGACGCAGTTGTCCTCCCCCAGGTCACCGAGGCTCTTGCCGCCAAA
GGGATAGACAATATTTCCACCTCTGGGGTAGCAATTATCACCTCCATCGACAAAGATCTCCAGCAAAAAACGCTTTTCGG
CCTGCGCAGGCATCTCTCGGATCTCGATGTGCGACTCAATGGTTATCAGCACAATCAGGTTCAGGAGGAGATCAAGGCTC
TCAATTACCAAGGCGATCTCAAACTGGACCAAGATGCCTTTCTCTTCGGTAAGGTTATAAAAATAGAGACCGAAGACAAG
ACGATAAAAATCAGTGTCTCTTTTGGCCCCAGAATAGGCCAGGGAGTTATTGATGCCAAGGGCCTTATCCCCCTCACCAA
TGCCCTCGTACAGTGGCGTAAAAATCGTTGGGCCCAGGCAAAGGCAAAAGATCGCCAGGCCCTTCTTGAACAGATCGAAG
TGGGAGATACCCTCTGGGTAAGCGTTCGAGAAATTCCTGAAACGGGCGTAGCGTTGCTTGATTTAAGAAAATACCCCACC
GTCCAAGGCGGAGCCTTGGTGAGCCACGCCGGATCAATAAAAAGCGTCGCAGGTGGTAGCGAAAATCGTTTTTACAATAG
AGCTATCTACGCCGAGCGTCCCATGGGATCTACCTTCAAACCCTTTCTCTTTACAGCCGCCCTGCAACTTGGCTGGAATA
GTGCGGCCCCTCTTAATAACAGCCGCAATATTTTTGTCTACCAAGGAATGCCATATTATCCCCGCCCCGACCACATCAGC
CCTTATCCACAGGTTTCCATGAGCTGGGCGGGAACGAAATCTGAGAATGTTGCCTGCATCTGGCTCCTCTATCACCTAAC
AGACCACCTCAGTAAGGAAGAGTTCTACGATCTTGCCCTGCACACAGGATTCAGCCGGACAAAGGCGAGTGGTGGTAAAG
AGTCATACCGCAATTTTCACAAAAGGATTCGTGATAAATACGGCATTATTGTCACTCGGAAGAGTTTGCAAGAAGCCGCC
TACCAACAGGCCATTAGCAATATTGAAACAGATTTTTTATTTGAAAATATGGAGGCTGAATACAAGCAGATAAAGGGCCT
CCAATATGGTCTTGGCTTTAAGAAATTCAAGGAAGAATTGGCGGAGAACAAAAGGGCCACTAGAGCAGAAAGGAGAAAAG
AGCATCGCCAACTGAGTACCAGAGAAAAGAATGAATATACTCTACGAGAAAAACTGCTCGACCACTCTTTTTTAGCAGCC
GCCAAACTCAAGGCAGACCTCAACCTCTTTAAAGCCAATATAAAAGAAGACAATGATATTTTTGATTTTTTCCAAAAAGA
TACCATCATCTACTCCAAACCGGAAGAGATGCCAGATCTCTATCTTTCCTCAATCACCGGCAAATACCATTTTGGCTACA
AGCTGAACGACAACGAGGAGTTCCACCCTCTCTCGAACGGGGATATCCAAAGAATATTAGTATCCATGACCAGCAACGAA
AAACACTCCTTCTGGCAAGAGATACAACTGGACGAGATGCTCTCGGTAGCAGCCTTCGATATGCTGGAAACAGAGAGTGG
CTTTGAATACAAAAAACTAAGCAAAAAGTTACCCTATGATTTTGAGGTGCTGAGCAAGGTAAGAGATTTCCGCGTCGCGG
TCGGCCTACACTATCTGATCAGCCTTGCCCGGGAAATGGGGATAGCCTCCCAGCTTGAACCAGTCCTCTCCTTCCCCCTG
GGGTCCAATTCTATTACCCTGCTAGAAGCTGTCTCCTTTTACGAGACTATCATTACGGGGAAAGCCTGGTCCTCTTCAGG
GAAACAGGATGATAAAGAGTTAGCTATAATCGACCGAATTGAATCATCCGAAGGCGACATTCTCTTTCAGGCCCAATCTG
TCGAACAAAAGATTGTCGACGCCCAAACCTCTCTCAGTGTCAGCAACATCCTTGAAAATACAGTAAATTTAGGCACCGGC
AGGGCGGCAAAAAAAAGCGTTCGCCTCAGCTCGGCCGACGAGGTGATAAATCAGGAATTACGAGACCTTAATATCCCCGT
TCCTTTGCTAGGTAAAACGGGCACGGCAAACAACTATACCAATGCCTCATTTATAGGATATGTTCCTGGTTTTGATACCA
ATAGTAAAAAAATAACCCTTGAAAATGGCTATACGATAGGTGTTTACACAGGCTATGACAATAACAAACCGATGAAACAC
AAAACTGTACGTATTGCAGGATCCACCGGAGCACTCCCCATCTGGAGCACCATTGCCAACCAGCTCCTTCTGGGACACAA
TTATGGAGATCAACTCAACCTTGCAGATCTCTCCTTTGACGGCCTTAAACTCAGTCGCCCTCAATTAGGCCAGGTCTCGC
TAGCCATGAATATAAAGGACGGTGGTCTGCTTACCACCCCCTCACGTCTCGCCAATAATAGACAGCCCGCAATTATTACC
TTTGCCAGAGAAGAGGGTAATAGATTAAAATTAGAACATTATTATCGTCCATTTTGGCAGGTTAAGGGGGAGACTAAAGA
TCCACTTGCAAAGTCGGCTCTTCAATAA

Upstream 100 bases:

>100_bases
TCAACCCTATACTGGTTTGTCGCAATAAATCCTGGAGATGCCATAAGAGAAAGTAATATTAAGCAGATCCTTGGTAAACA
GAGTAACGTCTACTATAGCG

Downstream 100 bases:

>100_bases
CAAGAACGATAATTCAGGACCAATATCGCTGCTATCGAAATCTTTACTCACCTGCAAGAACAATTTTTACTAGAATAAAG
GTTTGCAAGAGGATCCTGCA

Product: penicillin-binding protein 1A

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1075_residues
MGQHALVSSLTKPIDNMSNTLIFHKILSMPSLPAEDNRFFDHFGFDVMGISRAMITNVRAGRIVQGGSTLTQQTAKNLFK
RADRSIKEKLKELLFALRLEYHYSKEQIFEFYANQFYVSGNGHGLGIAARYYFNKSASELNLVESAFIAGSVKGPNYYNP
FTKKTTESIEEAKKRANIRLAYVLRKMKKEGMIGEDEFNRALAEGVPFNKGQFGYELDYTMELVRDAVVLPQVTEALAAK
GIDNISTSGVAIITSIDKDLQQKTLFGLRRHLSDLDVRLNGYQHNQVQEEIKALNYQGDLKLDQDAFLFGKVIKIETEDK
TIKISVSFGPRIGQGVIDAKGLIPLTNALVQWRKNRWAQAKAKDRQALLEQIEVGDTLWVSVREIPETGVALLDLRKYPT
VQGGALVSHAGSIKSVAGGSENRFYNRAIYAERPMGSTFKPFLFTAALQLGWNSAAPLNNSRNIFVYQGMPYYPRPDHIS
PYPQVSMSWAGTKSENVACIWLLYHLTDHLSKEEFYDLALHTGFSRTKASGGKESYRNFHKRIRDKYGIIVTRKSLQEAA
YQQAISNIETDFLFENMEAEYKQIKGLQYGLGFKKFKEELAENKRATRAERRKEHRQLSTREKNEYTLREKLLDHSFLAA
AKLKADLNLFKANIKEDNDIFDFFQKDTIIYSKPEEMPDLYLSSITGKYHFGYKLNDNEEFHPLSNGDIQRILVSMTSNE
KHSFWQEIQLDEMLSVAAFDMLETESGFEYKKLSKKLPYDFEVLSKVRDFRVAVGLHYLISLAREMGIASQLEPVLSFPL
GSNSITLLEAVSFYETIITGKAWSSSGKQDDKELAIIDRIESSEGDILFQAQSVEQKIVDAQTSLSVSNILENTVNLGTG
RAAKKSVRLSSADEVINQELRDLNIPVPLLGKTGTANNYTNASFIGYVPGFDTNSKKITLENGYTIGVYTGYDNNKPMKH
KTVRIAGSTGALPIWSTIANQLLLGHNYGDQLNLADLSFDGLKLSRPQLGQVSLAMNIKDGGLLTTPSRLANNRQPAIIT
FAREEGNRLKLEHYYRPFWQVKGETKDPLAKSALQ

Sequences:
NA

Specific function: NA

COG id: COG5009

COG function: function code M; Membrane carboxypeptidase/penicillin-binding protein

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA