Definition Desulfotalea psychrophila LSv54, complete genome.
Accession NC_006138
Length 3,523,383

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Identifier: 51243968

GI number:

Start: 125826

End: 128657

Strand: Reverse

Name: Not Available

Synonym: DP0116

Alternate gene names: NA

Gene position: NA

Preceding gene: 51243969

Following gene: 51243967

Centisome position: NA

GC content: NA

Gene sequence:

>2832_bases
ATGGAACCGCAAATATTAAGCATTCGGGGTGCGCGGATGCATAATTTGAAGAATGTAGATGTTGATATTCCGCGTAATAA
ATTCGTTGTATTTACTGGTCTTTCTGGTTCCGGTAAATCAAGCCTCGCCTTTGATACCCTCTATGCGGAGGGGCAGCGTC
GTTATGTTGAGTCTCTCTCCACCTATGCCCGTCAGTTTCTAGGGCAGATGGATAAACCCGACGTTGATTCTCTTGAGGGC
TTATCGCCAGCCGTTTCCATTGAGCAGAAGACAACCAACAATAATCCTCGTTCGACCGTAGGGACGGTAACGGAGATCTA
TGATCATCTGCGTCTGCTCTTTGCCCGTTGTGGTCGTCCTCACTGTCACCAGTGTGGAGAAGAGATCCAGTCCCAGTCCA
TAGAGGATATGGTTAATATATTATTGGCAAAGCCTGCGGGCACCAAGGTCGTTTTGCTTGCTCCTCTGGTAACAGAGCGT
AAGGGACGACATGAAAAGCTTTTGGCCCAGATACGCAAGGAGGGCTTTGTCCGTATCCGGGTTGATGGCGATATTGTTCA
TGCCGATGAGGACCTTGAGCTGGATAAAAATCATAAGCACTCCATCGAGGTGGTGGTGGATAGAATAGTGCTGAAAGAGG
GCGTTGGCAGGCGACTGTCTGATTCTATCAGCACCGCAGTGAGGCTTACCGAGGGTTTTTTGGCAGTCCTCTATCCTGAG
GATAACTCCCTTGAGCTTTTTAGCGAGCATGCCGCCTGTCATCACTGCGGTATTTCTATGCCGCCTCTTTCTACTCAGCT
CTTTTCCTTTAATAATCCCTTGGGTGCCTGTTCCGATTGCGGTGGACTTGGGGTGAAGCAGTTCTTTGACCCTGCTCTGG
TGGTCCCTGATCCTGCCAAGAGCATCGTCGAGGGGACACTTGCTCCTTGGGCCTGGCGTGAGGAGATGTCCTATACGGGC
CATATTCTCACCTCTCTGGCCAGGCATTATCATTTCTCTTTGACGACGCCCTTTGAGGGTCTACCCGTTCGAATTCAGGA
GATACTGCTCCATGGCTCGGGCGCTGAGGAGATTATCTTTCATTACCAGAAGGGCCGAAGGAAGATGACCTCGGAAAAGC
CCTTTGAGGGGATTATTCCCCAGCTGAATCGTCGTTTCCATGAGACCCAGTCTCCCATGATCCGGGAAGAGCTCGGTAAG
TATATGAACGAACAGGTCTGCCCGACCTGTGGGGGCGCACGCCTGAAGCCTACGGCCTTGGCCGTTAAGGTGGGGCCCTG
GTCGATATACGATCTTGTCGGCTTTTCCATTGAGCAGCTACGCCGGGAGTTGGCCCAAGTCTCATTCACCGAACGGGAAG
AGAAGATCGGTGGTCCTATTTTGAAGGAAATTGCCGATAGACTCTCCTTCTTGGCCGATGTTGGTCTGGGCTATCTCTCC
CTGTCCCGGCGTGCTGGAACCCTCTCCGGTGGAGAGGCGCAGCGTATTCGTCTGGCATCGCAGATAGGTTCCCGTCTTGC
CGGGGTGCTCTATATTCTTGATGAACCAAGTATCGGTCTGCACCAGAGGGATAATGAGAAGCTTATCAAGACCCTGGTGG
AGCTACGTGATCTGGGTAATAGCGTCTTGGTGGTGGAGCATGATACCGAGACTATTTTGGCTGCCGACCATGTGTTGGAT
ATGGGGCTCGGTGCCGGAGTGCATGGTGGTGAGGTTGTCTATAATGGTTCCGTTCAAGGCCTGCTGGAGGATGAAAAATC
CATTACCGGGGCCTATCTCTCCGGGCGTAAAGAGATTGCCGTACCGGCTAAACGCCGACCTGTCTCTAAGGCCAAGAAGA
GGAATCTCAGGGTGAAAAATGGCATTGAGAATAATCTGAAGAAGGTGAATGTCTCCTTTCCTCTTGGGGTGATGACCTGT
GTTACCGGTGTTTCAGGATCCGGCAAGAGTTCACTGGTGATGGAGACTCTTTATCGCTATGCCCATGCGGGTCTGGTGAA
GAGGATGGCGAGCTTTCAGCAGGGAGGGACAGAGGTGAGCGGCCTGGATCTGATAGATAAAATTGTTGATATTGATCAGA
GCCCCATCGGCCGAACGCCACGATCTAATCCTGCAACCTATACCGGTGTCTTTACCCCTATTCGGGAGCTTTTTGCCTCT
TTGCCAGAGGCCCGGGCCCGTGGCTATAAGCCTGGGCGTTTTAGTTTTAATATCAAGGGTGGTCGTTGCGAGGCCTGTGA
TGGTGAGGGGGTAAATCGAATCTCCATGCACTTCCTGCCCGATGTCTATGTAGTCTGTGAAACATGTAAGGGCCGTCGTT
ATAATAGTGAAACCCTTGAGATAGAGTACCGTGGCAAAAATATCCATGAGGTGCTTGCCATGAAGGTGGAGGAGGCTCTG
GAGTTCTTTCAAAATGTGCCCCTTATTAAAAGACGTTTACAGACCCTCTTTGATGTGGGCCTCTCCTATATTTCCCTGGG
GCAATCTTCTGTGACTCTCTCCGGTGGAGAGGCCCAGCGAGTGAAACTCTCCCGTGAACTGTCGGGACGATCCACGGGCA
AAGCCCTTTATATTCTCGATGAGCCGACCACAGGTCTTCATCCGGCAGATATTCAGCATCTGCTCCATGTTTTGAATAGA
TTGGTAGAGGCAGGAAATACGGTGGTTGTGATAGAGCATAACCTGGATGTGGTGAAAACCGCAGATTGGCTTATTGATGT
CGGTCCGGAGGGTGGTGATGGTGGCGGAGAGATTATTGCTCAGGGAAGGCCGGAGGATGTGTGCACGGTTGCTGCCTCCC
ACACTGGCAGATTTCTCCGTCATGTCCTCTGA

Upstream 100 bases:

>100_bases
TTGATCATCAGGGGTTCAGGGGAGGTGTTACTCTTCAGGGCTGTCGTCTGTAAAAAGATATGAAAGATACTACTGTCAGT
AGCAGGAGTAGAGGGCTTAT

Downstream 100 bases:

>100_bases
TTTTGCCTCTTATCCCCTAAAAATGTATGAGAAAGGCTTGCTTGTCCAGGAAAAGTGCGTTTATATGAGAGGCTATTTTT
TGCAGGTGATTTTGTAGTTT

Product: excinuclease ABC, subunit A

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>943_residues
MEPQILSIRGARMHNLKNVDVDIPRNKFVVFTGLSGSGKSSLAFDTLYAEGQRRYVESLSTYARQFLGQMDKPDVDSLEG
LSPAVSIEQKTTNNNPRSTVGTVTEIYDHLRLLFARCGRPHCHQCGEEIQSQSIEDMVNILLAKPAGTKVVLLAPLVTER
KGRHEKLLAQIRKEGFVRIRVDGDIVHADEDLELDKNHKHSIEVVVDRIVLKEGVGRRLSDSISTAVRLTEGFLAVLYPE
DNSLELFSEHAACHHCGISMPPLSTQLFSFNNPLGACSDCGGLGVKQFFDPALVVPDPAKSIVEGTLAPWAWREEMSYTG
HILTSLARHYHFSLTTPFEGLPVRIQEILLHGSGAEEIIFHYQKGRRKMTSEKPFEGIIPQLNRRFHETQSPMIREELGK
YMNEQVCPTCGGARLKPTALAVKVGPWSIYDLVGFSIEQLRRELAQVSFTEREEKIGGPILKEIADRLSFLADVGLGYLS
LSRRAGTLSGGEAQRIRLASQIGSRLAGVLYILDEPSIGLHQRDNEKLIKTLVELRDLGNSVLVVEHDTETILAADHVLD
MGLGAGVHGGEVVYNGSVQGLLEDEKSITGAYLSGRKEIAVPAKRRPVSKAKKRNLRVKNGIENNLKKVNVSFPLGVMTC
VTGVSGSGKSSLVMETLYRYAHAGLVKRMASFQQGGTEVSGLDLIDKIVDIDQSPIGRTPRSNPATYTGVFTPIRELFAS
LPEARARGYKPGRFSFNIKGGRCEACDGEGVNRISMHFLPDVYVVCETCKGRRYNSETLEIEYRGKNIHEVLAMKVEEAL
EFFQNVPLIKRRLQTLFDVGLSYISLGQSSVTLSGGEAQRVKLSRELSGRSTGKALYILDEPTTGLHPADIQHLLHVLNR
LVEAGNTVVVIEHNLDVVKTADWLIDVGPEGGDGGGEIIAQGRPEDVCTVAASHTGRFLRHVL

Sequences:
NA

Specific function: NA

COG id: COG0178

COG function: function code L; Excinuclease ATPase subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA