| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50843758
Identifier: 50843758
GI number: 50843758
Start: 2524508
End: 2525653
Strand: Reverse
Name: 50843758
Synonym: PPA2323
Alternate gene names: NA
Gene position: 2525653-2524508 (Counterclockwise)
Preceding gene: 50843759
Following gene: 50843757
Centisome position: 98.65
GC content: 60.99
Gene sequence:
>1146_bases ATGCCGCACCCGTCGCTGCGTGCGGATGACAGATCGCGGGACACCCGCCCTCACAAAGGAACATCGATGTTCACCACCTC TGTCGGAGTCTTCGTCTTCGGACTCCTTGCCACCATCGCCGGCGGTGCTGTCGGAGCTGCCATCGGCGGCAACTACGCCT TCGTCCTCACCGGCTTCTGTGTGCTGGCCTCCTGGGGAGTGTTTGCCGCAACCGGAAACACCTTCGGCTTGGACTATCTG GCCTTTGGTCCCTTCATGGGCCCGCACATCGCGTTTGCTGGTGGCGTTGCGGCCGCCATCTATGCTCGGTACCGAGGGCA TCTGGGTGACGGCAAAGACGTCAACACCCCGCTTGCCGGCATCGGTCACCCCGACATCCTCTGCGTCGGTGCCGCCTTCG GCATTTTCGGCTACTTGTGCCAGATCGGCATCTCAAACATTCCGTGGTTCGGCAAGCACACCGACCCAGTCGCCCTGACG GTGCTGCTGTCCGGACTGTTGGCCCGTCTCATCTTTGGTGGAGTACCCGGCAAAGGACTGTTCCACGGCTCCCTGCACAA CCCAGAGCTTTTCCACGAGAACGCCACCAGTTTCCCGGCCAAGATCAAACCGGGCCCCAACGGACGGTGGTTGGAATGGC AGGAAAAACCCAGTCAGCTCCTTACCATCGGTTCACTGTTCGGCATCTTCGCCGGTGGCGCTTCTCTTTTCCTGGCCGCC AACGTTGGCGCCTACCTGACCACACGGGGACTCGCCAACAATCTGGCTGCTGCCAACGCCAACAGCTTTTGCTTCGGCAT TTCAGCTGTCATTATCCTGTTCCTCATCACTAATCGGAACATGCCGGTCCAGCATCACGTGACGAACATCGCCGGCTTGG CTGCGGTGCAGTTCTTCCCGCTGCTTATGGGCAAGACCCTCACCACTTACCACTGGACGTACACGTCCTCGTGGGATTCC CACACGTGGGGTATGGCCACGGTTGCCCTGGTCATTGCCGCATTCTTCGGTGTCTTCACCGCTGGCCTCGGCGAGTTCTG TGCCCGCCTTTGGTACAACCGCGGCACCAGCCATATCGATCCGCCCGCCGCTGCCATCTGGCTCGGTAACACCGTGGTCG TCTCGCTCGCCACCCTGTTCTCGTGA
Upstream 100 bases:
>100_bases AATCCGCCCCTGGCAACTGCTGATACCGGGTGGTTCAGACGTGCACCGGCGCACGCTTGAACCACCCCACCCCTGGGCCA ACGCCTAGGGTTGCCCAGAA
Downstream 100 bases:
>100_bases TCTCGCTTCAGGAGTAGCAACCATGCATGACGTCATCGACATACCTACTGATTTCGCCCGGGCCTACGTGTTCGACATGG ACGGCACTATCTACCTCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MPHPSLRADDRSRDTRPHKGTSMFTTSVGVFVFGLLATIAGGAVGAAIGGNYAFVLTGFCVLASWGVFAATGNTFGLDYL AFGPFMGPHIAFAGGVAAAIYARYRGHLGDGKDVNTPLAGIGHPDILCVGAAFGIFGYLCQIGISNIPWFGKHTDPVALT VLLSGLLARLIFGGVPGKGLFHGSLHNPELFHENATSFPAKIKPGPNGRWLEWQEKPSQLLTIGSLFGIFAGGASLFLAA NVGAYLTTRGLANNLAAANANSFCFGISAVIILFLITNRNMPVQHHVTNIAGLAAVQFFPLLMGKTLTTYHWTYTSSWDS HTWGMATVALVIAAFFGVFTAGLGEFCARLWYNRGTSHIDPPAAAIWLGNTVVVSLATLFS
Sequences:
>Translated_381_residues MPHPSLRADDRSRDTRPHKGTSMFTTSVGVFVFGLLATIAGGAVGAAIGGNYAFVLTGFCVLASWGVFAATGNTFGLDYL AFGPFMGPHIAFAGGVAAAIYARYRGHLGDGKDVNTPLAGIGHPDILCVGAAFGIFGYLCQIGISNIPWFGKHTDPVALT VLLSGLLARLIFGGVPGKGLFHGSLHNPELFHENATSFPAKIKPGPNGRWLEWQEKPSQLLTIGSLFGIFAGGASLFLAA NVGAYLTTRGLANNLAAANANSFCFGISAVIILFLITNRNMPVQHHVTNIAGLAAVQFFPLLMGKTLTTYHWTYTSSWDS HTWGMATVALVIAAFFGVFTAGLGEFCARLWYNRGTSHIDPPAAAIWLGNTVVVSLATLFS >Mature_380_residues PHPSLRADDRSRDTRPHKGTSMFTTSVGVFVFGLLATIAGGAVGAAIGGNYAFVLTGFCVLASWGVFAATGNTFGLDYLA FGPFMGPHIAFAGGVAAAIYARYRGHLGDGKDVNTPLAGIGHPDILCVGAAFGIFGYLCQIGISNIPWFGKHTDPVALTV LLSGLLARLIFGGVPGKGLFHGSLHNPELFHENATSFPAKIKPGPNGRWLEWQEKPSQLLTIGSLFGIFAGGASLFLAAN VGAYLTTRGLANNLAAANANSFCFGISAVIILFLITNRNMPVQHHVTNIAGLAAVQFFPLLMGKTLTTYHWTYTSSWDSH TWGMATVALVIAAFFGVFTAGLGEFCARLWYNRGTSHIDPPAAAIWLGNTVVVSLATLFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40211; Mature: 40080
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHPSLRADDRSRDTRPHKGTSMFTTSVGVFVFGLLATIAGGAVGAAIGGNYAFVLTGFC CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHH VLASWGVFAATGNTFGLDYLAFGPFMGPHIAFAGGVAAAIYARYRGHLGDGKDVNTPLAG HHHCCCCEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC IGHPDILCVGAAFGIFGYLCQIGISNIPWFGKHTDPVALTVLLSGLLARLIFGGVPGKGL CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCE FHGSLHNPELFHENATSFPAKIKPGPNGRWLEWQEKPSQLLTIGSLFGIFAGGASLFLAA ECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHEEEEE NVGAYLTTRGLANNLAAANANSFCFGISAVIILFLITNRNMPVQHHVTNIAGLAAVQFFP CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH LLMGKTLTTYHWTYTSSWDSHTWGMATVALVIAAFFGVFTAGLGEFCARLWYNRGTSHID HHHCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PPAAAIWLGNTVVVSLATLFS CCHHEEEECCHHHHHHHHHCC >Mature Secondary Structure PHPSLRADDRSRDTRPHKGTSMFTTSVGVFVFGLLATIAGGAVGAAIGGNYAFVLTGFC CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHH VLASWGVFAATGNTFGLDYLAFGPFMGPHIAFAGGVAAAIYARYRGHLGDGKDVNTPLAG HHHCCCCEEECCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC IGHPDILCVGAAFGIFGYLCQIGISNIPWFGKHTDPVALTVLLSGLLARLIFGGVPGKGL CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCE FHGSLHNPELFHENATSFPAKIKPGPNGRWLEWQEKPSQLLTIGSLFGIFAGGASLFLAA ECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHEEEEE NVGAYLTTRGLANNLAAANANSFCFGISAVIILFLITNRNMPVQHHVTNIAGLAAVQFFP CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH LLMGKTLTTYHWTYTSSWDSHTWGMATVALVIAAFFGVFTAGLGEFCARLWYNRGTSHID HHHCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PPAAAIWLGNTVVVSLATLFS CCHHEEEECCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA