Definition Propionibacterium acnes KPA171202, complete genome.
Accession NC_006085
Length 2,560,265

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The map label for this gene is 50843627

Identifier: 50843627

GI number: 50843627

Start: 2371561

End: 2373414

Strand: Direct

Name: 50843627

Synonym: PPA2190

Alternate gene names: NA

Gene position: 2371561-2373414 (Clockwise)

Preceding gene: 50843626

Following gene: 50843630

Centisome position: 92.63

GC content: 62.08

Gene sequence:

>1854_bases
ATGGCTGACGCGTCGCGCGGCGCCAACTCGCCGTCTCCACGTCACGCCGCTCAACCGGATTGGATGAACGATCCGGAGGC
CAATGAGGACACACATGTCCTGCGGCGGGCGGATCTCAGGGCAGCCGCCCGGCCACCGACGCGTTCCCCGCGTCCACGCC
GGTCCGCTGCTGAGCCCCCTGTTAACGCCCCACAGCCCCTCAACGAGCCGAAATCCCGCCCTACCCCAGCCCGACGAGCC
GCAACCGCCAAGGCTTCACCAGCTAGCCGCAGCCGCCGCAGACCATCGCGGTGGAACGAGGAGGCCAGACGCAACCATGC
CTTCAACACCTGCCTGGGATGGACGATACTTGGGGCCATCGTCCCCGGCTTAACCCTGTCTCGTAGCCGTGCCCCGCGTC
GCCGCGTCACAGGTCTGACGATCATCGGTCTTCTCCTCATTGGGCTGACCATTGCTGTTTTCTTCATCCTGGCTAACCCG
ACAGTTGCAGCGTCGATCGTCGTGCGACCCAAGTTGCTCACCGCTCTAACCTGGGGCTTGCCGAGTCTTGCCGTCGCCTT
GGTGGCATTGCTGACCTTCTCCCACCTCGACCTTCGACCTCAGGGCATCACCCGCGGACAACGCTGGGTCTCGACCATCC
TTGTCACCGCATTGTGTACCACCATCGCAACCCCGCTAGCTGTCGCTGGCCGGTATGCCTACGATCAGGACCACATGCTC
GGCCGGATCTTCACCGATAAGCGGTCCGGCACCCGCCCATCCATCAACTACAACCAGGACGTCAAGGCGATTTGGGCGGC
CAAGCCGCGAGTCAACGTCCTGCTCGTCGGCGCCGACGACAGCAAAGTGCGCAACTATCGCGCCGAGAACTCCATGAACA
CTGACACGATCATGGTGGCGTCGATTAATACCTCCAACGGTGATACCTCGATCTTCCAGATCCCCCGCAACACCGCGAGA
ATGCCATTCCCGTCTGATTCGCCGCTGCACAGGGACTTCCCCAACGGTTTCGTCGGGAAAGACGGTGACGGTAACAACCC
CGACTACATGGCTAACGAGATCTGGTCGACGGTAAAGGCCCGCTACGTCGATCGCATGGGCGCGACCGACTACCCCGGGG
CCGACGCCCTCAAGCTGGCCACCGGAGAGGCCCTCGGCCTCAAGATCGACTACTTCGTCATGCTCGACATTGACGGCCTT
CAGAAGCTCATTGACGCGCTCGGCGGAGTGTCGGTGAACATCAACGAGCGCCTGCCCATCGCAGGCAATACCGAGGGCAA
GAGGCCGGACGGTTACCTCGAGATTGGCGCCAACCAACACCTCGACGGCTACCACGCCATGTGGTACGCACGGTCGCGCT
CAGCGAGCACCGACTACGACCGGATGGGACGCCAGTCTTGCCTTATCAAGGCCGTTCTTGACCAAACCAGCCCGCAGACT
GTGTTGACCCGCTTCGAATCGATCGCTGATGCTTCCGGGCAGATGGTGGTCTCTGACATACCGCAGGGAATGCTGCCGGC
CTTCGTCGACCTCGCCATCAACATGCGTGACGCCAACATCAACCGCGTCGTTTTCACCAATGGCAAGCACGGATTCTTCT
CTTCCCACCCGGATTACGATCTCATCCGCAAACAGGTGGAGGCCGCCATCCATGGCGTCTCTGCGTCAAAAAACAAGAAC
AAGCCGGTAACGGGGGCTTCGTCTGCTAACACCCACAAGACCGCCATGGCGCCGCCGAGCCACAGCGGGTTAAAGAAGTC
CCCGCAGACCCCCGCTCCACGCCCGTCACCCGATAACCACGACGTCTCCCAATCTGTGACTGACGCCTGCGCCTATAACC
CGCAGCAGCCCTGA

Upstream 100 bases:

>100_bases
AGTCACGATCGCCGCCCGCCAGCCAGGCGGTACCGCCCCGTATTGGGTGCAGCGGTTAACATGGGGTCCACCCCATCGAC
ATTTACGGAAAGGGATGTGC

Downstream 100 bases:

>100_bases
CGCCTCTCCTGGGGCCGCGCCTGTGCGGTTCGTAGGCGTCGCTCGGGGTCAATGTCGCGGGGGTGCGGTACTCTCGCGAA
TCACCAGCGGGGCCGGAACC

Product: membrane-associated protein

Products: NA

Alternate protein names: Transcriptional Regulator-Like Protein; Transcriptional Regulator; LytR Family Transcriptional Regulator; Regulatory Protein; Cell Envelope-Like Transcriptional Attenuator; Transcription Attenuator LytR; Membrane-Associated Protein; LytR Family Regulatory Protein

Number of amino acids: Translated: 617; Mature: 616

Protein sequence:

>617_residues
MADASRGANSPSPRHAAQPDWMNDPEANEDTHVLRRADLRAAARPPTRSPRPRRSAAEPPVNAPQPLNEPKSRPTPARRA
ATAKASPASRSRRRPSRWNEEARRNHAFNTCLGWTILGAIVPGLTLSRSRAPRRRVTGLTIIGLLLIGLTIAVFFILANP
TVAASIVVRPKLLTALTWGLPSLAVALVALLTFSHLDLRPQGITRGQRWVSTILVTALCTTIATPLAVAGRYAYDQDHML
GRIFTDKRSGTRPSINYNQDVKAIWAAKPRVNVLLVGADDSKVRNYRAENSMNTDTIMVASINTSNGDTSIFQIPRNTAR
MPFPSDSPLHRDFPNGFVGKDGDGNNPDYMANEIWSTVKARYVDRMGATDYPGADALKLATGEALGLKIDYFVMLDIDGL
QKLIDALGGVSVNINERLPIAGNTEGKRPDGYLEIGANQHLDGYHAMWYARSRSASTDYDRMGRQSCLIKAVLDQTSPQT
VLTRFESIADASGQMVVSDIPQGMLPAFVDLAINMRDANINRVVFTNGKHGFFSSHPDYDLIRKQVEAAIHGVSASKNKN
KPVTGASSANTHKTAMAPPSHSGLKKSPQTPAPRPSPDNHDVSQSVTDACAYNPQQP

Sequences:

>Translated_617_residues
MADASRGANSPSPRHAAQPDWMNDPEANEDTHVLRRADLRAAARPPTRSPRPRRSAAEPPVNAPQPLNEPKSRPTPARRA
ATAKASPASRSRRRPSRWNEEARRNHAFNTCLGWTILGAIVPGLTLSRSRAPRRRVTGLTIIGLLLIGLTIAVFFILANP
TVAASIVVRPKLLTALTWGLPSLAVALVALLTFSHLDLRPQGITRGQRWVSTILVTALCTTIATPLAVAGRYAYDQDHML
GRIFTDKRSGTRPSINYNQDVKAIWAAKPRVNVLLVGADDSKVRNYRAENSMNTDTIMVASINTSNGDTSIFQIPRNTAR
MPFPSDSPLHRDFPNGFVGKDGDGNNPDYMANEIWSTVKARYVDRMGATDYPGADALKLATGEALGLKIDYFVMLDIDGL
QKLIDALGGVSVNINERLPIAGNTEGKRPDGYLEIGANQHLDGYHAMWYARSRSASTDYDRMGRQSCLIKAVLDQTSPQT
VLTRFESIADASGQMVVSDIPQGMLPAFVDLAINMRDANINRVVFTNGKHGFFSSHPDYDLIRKQVEAAIHGVSASKNKN
KPVTGASSANTHKTAMAPPSHSGLKKSPQTPAPRPSPDNHDVSQSVTDACAYNPQQP
>Mature_616_residues
ADASRGANSPSPRHAAQPDWMNDPEANEDTHVLRRADLRAAARPPTRSPRPRRSAAEPPVNAPQPLNEPKSRPTPARRAA
TAKASPASRSRRRPSRWNEEARRNHAFNTCLGWTILGAIVPGLTLSRSRAPRRRVTGLTIIGLLLIGLTIAVFFILANPT
VAASIVVRPKLLTALTWGLPSLAVALVALLTFSHLDLRPQGITRGQRWVSTILVTALCTTIATPLAVAGRYAYDQDHMLG
RIFTDKRSGTRPSINYNQDVKAIWAAKPRVNVLLVGADDSKVRNYRAENSMNTDTIMVASINTSNGDTSIFQIPRNTARM
PFPSDSPLHRDFPNGFVGKDGDGNNPDYMANEIWSTVKARYVDRMGATDYPGADALKLATGEALGLKIDYFVMLDIDGLQ
KLIDALGGVSVNINERLPIAGNTEGKRPDGYLEIGANQHLDGYHAMWYARSRSASTDYDRMGRQSCLIKAVLDQTSPQTV
LTRFESIADASGQMVVSDIPQGMLPAFVDLAINMRDANINRVVFTNGKHGFFSSHPDYDLIRKQVEAAIHGVSASKNKNK
PVTGASSANTHKTAMAPPSHSGLKKSPQTPAPRPSPDNHDVSQSVTDACAYNPQQP

Specific function: Unknown

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67142; Mature: 67011

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADASRGANSPSPRHAAQPDWMNDPEANEDTHVLRRADLRAAARPPTRSPRPRRSAAEPP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
VNAPQPLNEPKSRPTPARRAATAKASPASRSRRRPSRWNEEARRNHAFNTCLGWTILGAI
CCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VPGLTLSRSRAPRRRVTGLTIIGLLLIGLTIAVFFILANPTVAASIVVRPKLLTALTWGL
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCH
PSLAVALVALLTFSHLDLRPQGITRGQRWVSTILVTALCTTIATPLAVAGRYAYDQDHML
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
GRIFTDKRSGTRPSINYNQDVKAIWAAKPRVNVLLVGADDSKVRNYRAENSMNTDTIMVA
HHHEECCCCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCHHHHHHHHCCCCCCCEEEEE
SINTSNGDTSIFQIPRNTARMPFPSDSPLHRDFPNGFVGKDGDGNNPDYMANEIWSTVKA
EEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
RYVDRMGATDYPGADALKLATGEALGLKIDYFVMLDIDGLQKLIDALGGVSVNINERLPI
HHHHHCCCCCCCCCCEEEEECCCEEEEEEEEEEEEEHHHHHHHHHHHCCCEEEECCCCCC
AGNTEGKRPDGYLEIGANQHLDGYHAMWYARSRSASTDYDRMGRQSCLIKAVLDQTSPQT
CCCCCCCCCCCEEEECCCCCCCCHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHH
VLTRFESIADASGQMVVSDIPQGMLPAFVDLAINMRDANINRVVFTNGKHGFFSSHPDYD
HHHHHHHHHCCCCCEEHHHCCCHHHHHHHHHEEEEECCCCCEEEEECCCCCCCCCCCCHH
LIRKQVEAAIHGVSASKNKNKPVTGASSANTHKTAMAPPSHSGLKKSPQTPAPRPSPDNH
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DVSQSVTDACAYNPQQP
CHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ADASRGANSPSPRHAAQPDWMNDPEANEDTHVLRRADLRAAARPPTRSPRPRRSAAEPP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
VNAPQPLNEPKSRPTPARRAATAKASPASRSRRRPSRWNEEARRNHAFNTCLGWTILGAI
CCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VPGLTLSRSRAPRRRVTGLTIIGLLLIGLTIAVFFILANPTVAASIVVRPKLLTALTWGL
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCH
PSLAVALVALLTFSHLDLRPQGITRGQRWVSTILVTALCTTIATPLAVAGRYAYDQDHML
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
GRIFTDKRSGTRPSINYNQDVKAIWAAKPRVNVLLVGADDSKVRNYRAENSMNTDTIMVA
HHHEECCCCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCHHHHHHHHCCCCCCCEEEEE
SINTSNGDTSIFQIPRNTARMPFPSDSPLHRDFPNGFVGKDGDGNNPDYMANEIWSTVKA
EEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
RYVDRMGATDYPGADALKLATGEALGLKIDYFVMLDIDGLQKLIDALGGVSVNINERLPI
HHHHHCCCCCCCCCCEEEEECCCEEEEEEEEEEEEEHHHHHHHHHHHCCCEEEECCCCCC
AGNTEGKRPDGYLEIGANQHLDGYHAMWYARSRSASTDYDRMGRQSCLIKAVLDQTSPQT
CCCCCCCCCCCEEEECCCCCCCCHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHH
VLTRFESIADASGQMVVSDIPQGMLPAFVDLAINMRDANINRVVFTNGKHGFFSSHPDYD
HHHHHHHHHCCCCCEEHHHCCCHHHHHHHHHEEEEECCCCCEEEEECCCCCCCCCCCCHH
LIRKQVEAAIHGVSASKNKNKPVTGASSANTHKTAMAPPSHSGLKKSPQTPAPRPSPDNH
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DVSQSVTDACAYNPQQP
CHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA