| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50843627
Identifier: 50843627
GI number: 50843627
Start: 2371561
End: 2373414
Strand: Direct
Name: 50843627
Synonym: PPA2190
Alternate gene names: NA
Gene position: 2371561-2373414 (Clockwise)
Preceding gene: 50843626
Following gene: 50843630
Centisome position: 92.63
GC content: 62.08
Gene sequence:
>1854_bases ATGGCTGACGCGTCGCGCGGCGCCAACTCGCCGTCTCCACGTCACGCCGCTCAACCGGATTGGATGAACGATCCGGAGGC CAATGAGGACACACATGTCCTGCGGCGGGCGGATCTCAGGGCAGCCGCCCGGCCACCGACGCGTTCCCCGCGTCCACGCC GGTCCGCTGCTGAGCCCCCTGTTAACGCCCCACAGCCCCTCAACGAGCCGAAATCCCGCCCTACCCCAGCCCGACGAGCC GCAACCGCCAAGGCTTCACCAGCTAGCCGCAGCCGCCGCAGACCATCGCGGTGGAACGAGGAGGCCAGACGCAACCATGC CTTCAACACCTGCCTGGGATGGACGATACTTGGGGCCATCGTCCCCGGCTTAACCCTGTCTCGTAGCCGTGCCCCGCGTC GCCGCGTCACAGGTCTGACGATCATCGGTCTTCTCCTCATTGGGCTGACCATTGCTGTTTTCTTCATCCTGGCTAACCCG ACAGTTGCAGCGTCGATCGTCGTGCGACCCAAGTTGCTCACCGCTCTAACCTGGGGCTTGCCGAGTCTTGCCGTCGCCTT GGTGGCATTGCTGACCTTCTCCCACCTCGACCTTCGACCTCAGGGCATCACCCGCGGACAACGCTGGGTCTCGACCATCC TTGTCACCGCATTGTGTACCACCATCGCAACCCCGCTAGCTGTCGCTGGCCGGTATGCCTACGATCAGGACCACATGCTC GGCCGGATCTTCACCGATAAGCGGTCCGGCACCCGCCCATCCATCAACTACAACCAGGACGTCAAGGCGATTTGGGCGGC CAAGCCGCGAGTCAACGTCCTGCTCGTCGGCGCCGACGACAGCAAAGTGCGCAACTATCGCGCCGAGAACTCCATGAACA CTGACACGATCATGGTGGCGTCGATTAATACCTCCAACGGTGATACCTCGATCTTCCAGATCCCCCGCAACACCGCGAGA ATGCCATTCCCGTCTGATTCGCCGCTGCACAGGGACTTCCCCAACGGTTTCGTCGGGAAAGACGGTGACGGTAACAACCC CGACTACATGGCTAACGAGATCTGGTCGACGGTAAAGGCCCGCTACGTCGATCGCATGGGCGCGACCGACTACCCCGGGG CCGACGCCCTCAAGCTGGCCACCGGAGAGGCCCTCGGCCTCAAGATCGACTACTTCGTCATGCTCGACATTGACGGCCTT CAGAAGCTCATTGACGCGCTCGGCGGAGTGTCGGTGAACATCAACGAGCGCCTGCCCATCGCAGGCAATACCGAGGGCAA GAGGCCGGACGGTTACCTCGAGATTGGCGCCAACCAACACCTCGACGGCTACCACGCCATGTGGTACGCACGGTCGCGCT CAGCGAGCACCGACTACGACCGGATGGGACGCCAGTCTTGCCTTATCAAGGCCGTTCTTGACCAAACCAGCCCGCAGACT GTGTTGACCCGCTTCGAATCGATCGCTGATGCTTCCGGGCAGATGGTGGTCTCTGACATACCGCAGGGAATGCTGCCGGC CTTCGTCGACCTCGCCATCAACATGCGTGACGCCAACATCAACCGCGTCGTTTTCACCAATGGCAAGCACGGATTCTTCT CTTCCCACCCGGATTACGATCTCATCCGCAAACAGGTGGAGGCCGCCATCCATGGCGTCTCTGCGTCAAAAAACAAGAAC AAGCCGGTAACGGGGGCTTCGTCTGCTAACACCCACAAGACCGCCATGGCGCCGCCGAGCCACAGCGGGTTAAAGAAGTC CCCGCAGACCCCCGCTCCACGCCCGTCACCCGATAACCACGACGTCTCCCAATCTGTGACTGACGCCTGCGCCTATAACC CGCAGCAGCCCTGA
Upstream 100 bases:
>100_bases AGTCACGATCGCCGCCCGCCAGCCAGGCGGTACCGCCCCGTATTGGGTGCAGCGGTTAACATGGGGTCCACCCCATCGAC ATTTACGGAAAGGGATGTGC
Downstream 100 bases:
>100_bases CGCCTCTCCTGGGGCCGCGCCTGTGCGGTTCGTAGGCGTCGCTCGGGGTCAATGTCGCGGGGGTGCGGTACTCTCGCGAA TCACCAGCGGGGCCGGAACC
Product: membrane-associated protein
Products: NA
Alternate protein names: Transcriptional Regulator-Like Protein; Transcriptional Regulator; LytR Family Transcriptional Regulator; Regulatory Protein; Cell Envelope-Like Transcriptional Attenuator; Transcription Attenuator LytR; Membrane-Associated Protein; LytR Family Regulatory Protein
Number of amino acids: Translated: 617; Mature: 616
Protein sequence:
>617_residues MADASRGANSPSPRHAAQPDWMNDPEANEDTHVLRRADLRAAARPPTRSPRPRRSAAEPPVNAPQPLNEPKSRPTPARRA ATAKASPASRSRRRPSRWNEEARRNHAFNTCLGWTILGAIVPGLTLSRSRAPRRRVTGLTIIGLLLIGLTIAVFFILANP TVAASIVVRPKLLTALTWGLPSLAVALVALLTFSHLDLRPQGITRGQRWVSTILVTALCTTIATPLAVAGRYAYDQDHML GRIFTDKRSGTRPSINYNQDVKAIWAAKPRVNVLLVGADDSKVRNYRAENSMNTDTIMVASINTSNGDTSIFQIPRNTAR MPFPSDSPLHRDFPNGFVGKDGDGNNPDYMANEIWSTVKARYVDRMGATDYPGADALKLATGEALGLKIDYFVMLDIDGL QKLIDALGGVSVNINERLPIAGNTEGKRPDGYLEIGANQHLDGYHAMWYARSRSASTDYDRMGRQSCLIKAVLDQTSPQT VLTRFESIADASGQMVVSDIPQGMLPAFVDLAINMRDANINRVVFTNGKHGFFSSHPDYDLIRKQVEAAIHGVSASKNKN KPVTGASSANTHKTAMAPPSHSGLKKSPQTPAPRPSPDNHDVSQSVTDACAYNPQQP
Sequences:
>Translated_617_residues MADASRGANSPSPRHAAQPDWMNDPEANEDTHVLRRADLRAAARPPTRSPRPRRSAAEPPVNAPQPLNEPKSRPTPARRA ATAKASPASRSRRRPSRWNEEARRNHAFNTCLGWTILGAIVPGLTLSRSRAPRRRVTGLTIIGLLLIGLTIAVFFILANP TVAASIVVRPKLLTALTWGLPSLAVALVALLTFSHLDLRPQGITRGQRWVSTILVTALCTTIATPLAVAGRYAYDQDHML GRIFTDKRSGTRPSINYNQDVKAIWAAKPRVNVLLVGADDSKVRNYRAENSMNTDTIMVASINTSNGDTSIFQIPRNTAR MPFPSDSPLHRDFPNGFVGKDGDGNNPDYMANEIWSTVKARYVDRMGATDYPGADALKLATGEALGLKIDYFVMLDIDGL QKLIDALGGVSVNINERLPIAGNTEGKRPDGYLEIGANQHLDGYHAMWYARSRSASTDYDRMGRQSCLIKAVLDQTSPQT VLTRFESIADASGQMVVSDIPQGMLPAFVDLAINMRDANINRVVFTNGKHGFFSSHPDYDLIRKQVEAAIHGVSASKNKN KPVTGASSANTHKTAMAPPSHSGLKKSPQTPAPRPSPDNHDVSQSVTDACAYNPQQP >Mature_616_residues ADASRGANSPSPRHAAQPDWMNDPEANEDTHVLRRADLRAAARPPTRSPRPRRSAAEPPVNAPQPLNEPKSRPTPARRAA TAKASPASRSRRRPSRWNEEARRNHAFNTCLGWTILGAIVPGLTLSRSRAPRRRVTGLTIIGLLLIGLTIAVFFILANPT VAASIVVRPKLLTALTWGLPSLAVALVALLTFSHLDLRPQGITRGQRWVSTILVTALCTTIATPLAVAGRYAYDQDHMLG RIFTDKRSGTRPSINYNQDVKAIWAAKPRVNVLLVGADDSKVRNYRAENSMNTDTIMVASINTSNGDTSIFQIPRNTARM PFPSDSPLHRDFPNGFVGKDGDGNNPDYMANEIWSTVKARYVDRMGATDYPGADALKLATGEALGLKIDYFVMLDIDGLQ KLIDALGGVSVNINERLPIAGNTEGKRPDGYLEIGANQHLDGYHAMWYARSRSASTDYDRMGRQSCLIKAVLDQTSPQTV LTRFESIADASGQMVVSDIPQGMLPAFVDLAINMRDANINRVVFTNGKHGFFSSHPDYDLIRKQVEAAIHGVSASKNKNK PVTGASSANTHKTAMAPPSHSGLKKSPQTPAPRPSPDNHDVSQSVTDACAYNPQQP
Specific function: Unknown
COG id: COG1316
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67142; Mature: 67011
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADASRGANSPSPRHAAQPDWMNDPEANEDTHVLRRADLRAAARPPTRSPRPRRSAAEPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC VNAPQPLNEPKSRPTPARRAATAKASPASRSRRRPSRWNEEARRNHAFNTCLGWTILGAI CCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH VPGLTLSRSRAPRRRVTGLTIIGLLLIGLTIAVFFILANPTVAASIVVRPKLLTALTWGL HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCH PSLAVALVALLTFSHLDLRPQGITRGQRWVSTILVTALCTTIATPLAVAGRYAYDQDHML HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH GRIFTDKRSGTRPSINYNQDVKAIWAAKPRVNVLLVGADDSKVRNYRAENSMNTDTIMVA HHHEECCCCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCHHHHHHHHCCCCCCCEEEEE SINTSNGDTSIFQIPRNTARMPFPSDSPLHRDFPNGFVGKDGDGNNPDYMANEIWSTVKA EEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH RYVDRMGATDYPGADALKLATGEALGLKIDYFVMLDIDGLQKLIDALGGVSVNINERLPI HHHHHCCCCCCCCCCEEEEECCCEEEEEEEEEEEEEHHHHHHHHHHHCCCEEEECCCCCC AGNTEGKRPDGYLEIGANQHLDGYHAMWYARSRSASTDYDRMGRQSCLIKAVLDQTSPQT CCCCCCCCCCCEEEECCCCCCCCHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHH VLTRFESIADASGQMVVSDIPQGMLPAFVDLAINMRDANINRVVFTNGKHGFFSSHPDYD HHHHHHHHHCCCCCEEHHHCCCHHHHHHHHHEEEEECCCCCEEEEECCCCCCCCCCCCHH LIRKQVEAAIHGVSASKNKNKPVTGASSANTHKTAMAPPSHSGLKKSPQTPAPRPSPDNH HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DVSQSVTDACAYNPQQP CHHHHHHHHHCCCCCCC >Mature Secondary Structure ADASRGANSPSPRHAAQPDWMNDPEANEDTHVLRRADLRAAARPPTRSPRPRRSAAEPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC VNAPQPLNEPKSRPTPARRAATAKASPASRSRRRPSRWNEEARRNHAFNTCLGWTILGAI CCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH VPGLTLSRSRAPRRRVTGLTIIGLLLIGLTIAVFFILANPTVAASIVVRPKLLTALTWGL HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCH PSLAVALVALLTFSHLDLRPQGITRGQRWVSTILVTALCTTIATPLAVAGRYAYDQDHML HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH GRIFTDKRSGTRPSINYNQDVKAIWAAKPRVNVLLVGADDSKVRNYRAENSMNTDTIMVA HHHEECCCCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCHHHHHHHHCCCCCCCEEEEE SINTSNGDTSIFQIPRNTARMPFPSDSPLHRDFPNGFVGKDGDGNNPDYMANEIWSTVKA EEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH RYVDRMGATDYPGADALKLATGEALGLKIDYFVMLDIDGLQKLIDALGGVSVNINERLPI HHHHHCCCCCCCCCCEEEEECCCEEEEEEEEEEEEEHHHHHHHHHHHCCCEEEECCCCCC AGNTEGKRPDGYLEIGANQHLDGYHAMWYARSRSASTDYDRMGRQSCLIKAVLDQTSPQT CCCCCCCCCCCEEEECCCCCCCCHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHH VLTRFESIADASGQMVVSDIPQGMLPAFVDLAINMRDANINRVVFTNGKHGFFSSHPDYD HHHHHHHHHCCCCCEEHHHCCCHHHHHHHHHEEEEECCCCCEEEEECCCCCCCCCCCCHH LIRKQVEAAIHGVSASKNKNKPVTGASSANTHKTAMAPPSHSGLKKSPQTPAPRPSPDNH HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DVSQSVTDACAYNPQQP CHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA