| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50843549
Identifier: 50843549
GI number: 50843549
Start: 2285027
End: 2286121
Strand: Direct
Name: 50843549
Synonym: PPA2111
Alternate gene names: NA
Gene position: 2285027-2286121 (Clockwise)
Preceding gene: 50843548
Following gene: 50843550
Centisome position: 89.25
GC content: 68.4
Gene sequence:
>1095_bases ATGAGTTTGTTCTTGGTCGGCGGAGGGTACGACGACTCACTGGTGGAGGCCTACGACAAGTTCGTCTCCCAGGCCCGCCA TCACAATGCTGACGCTCCGATTGCGGTGGTCGTGGCCGGTCCGCCCTCCGAGTCCGCCGACCACGCCGCCGAATTGACGC GCATCGTCGCCTCCCGGTGGGTTGACGCGAACATCCTCACCATCTACCTAGACGGCCCGGGTACCGCCCCGATGATGGGC GCCCCGGCCACCCCGCTGTGGGCAGAGGACGAGTCCTTCCAGCTCCCCGACAATCTCGACGCCCTTGCCGGCATCATCGT CGGCGGCGGTGCCGTCCCCAGTTACATCAACGGTCTTGCACCGGCCGCCGAGCAGCTCTCGATGCTGGTGCGCGGCGGTG CTCCGTGGCTCGGCTTCTCGGCCGGTGCGATGGCCCCGTGTGTCACCGCTCTGGCAGGAGGATGGAAGCTGCAGGAACGC CAGGTCGGCCAGCAGACAGGTGCTGAGGGCTTCGACGAGGTCACCTTCGTCGAGGGCCTTGGCCTGGTCAGCCTGACCAT CTCCACCCACAATGACACCCTTTCCGGCGACGGCCTCATCATCTCGGCCGTCGAGTCCGGCCTGCTTTCCAGTGCCGTTG CCGTCGACGAGGCCACCTGCCTGCGCATCGACGCCTCGACCGGCCGCACCGAGGTGATGGGACGTGGCCTGGTTCGCTGG TTCACCCGCGAGGTCAACGGAGTTCTCGTCCGCTCCCAGCGCTCCGTCACCCCGGAAACGGCTCCAGCCCCGCACAAGCC CCGCTTCGACGGTCTGGCAAAGGTGGCGGCGGCGACCCGTGCCGCCCACGACAAGGAGGAGCGCGCGAAGGCAGCCCGGC AGCGTGCCGAGGAGAGACGTCGCGCGCGGAAGTCCAAGTCTGCTGATGACGAGACCAAGACCTCCGAGGGCTCCGCCACC CCCGAGGACGCACCTGCCTCCGCAGCCAACCCCCAGGCTGCCGCGGATCCGACCCCGACGGCAGGCCCGGAACCCGATCC CCTCTCGGATGCCGATCCCACCGCACAGCCCCCGATGGAGGACGTCAAGCCATGA
Upstream 100 bases:
>100_bases GCCCGGAATCGTTGACGAGGTGCGCTCACTGGCCTGATCAGTTCCCCGCCATGGCGCTGGTCCCCCGAGACCAATCGTTG CGGCACTATAGGCTGTTCCC
Downstream 100 bases:
>100_bases GCATGCACATTCTTGTCGTTGACGATGATCGCGCGGTACGAGAATCCCTCGCCCGATCCCTGCAGTACAGCGGCTACGAG GTCGATAGCGCCGCCGACGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MSLFLVGGGYDDSLVEAYDKFVSQARHHNADAPIAVVVAGPPSESADHAAELTRIVASRWVDANILTIYLDGPGTAPMMG APATPLWAEDESFQLPDNLDALAGIIVGGGAVPSYINGLAPAAEQLSMLVRGGAPWLGFSAGAMAPCVTALAGGWKLQER QVGQQTGAEGFDEVTFVEGLGLVSLTISTHNDTLSGDGLIISAVESGLLSSAVAVDEATCLRIDASTGRTEVMGRGLVRW FTREVNGVLVRSQRSVTPETAPAPHKPRFDGLAKVAAATRAAHDKEERAKAARQRAEERRRARKSKSADDETKTSEGSAT PEDAPASAANPQAAADPTPTAGPEPDPLSDADPTAQPPMEDVKP
Sequences:
>Translated_364_residues MSLFLVGGGYDDSLVEAYDKFVSQARHHNADAPIAVVVAGPPSESADHAAELTRIVASRWVDANILTIYLDGPGTAPMMG APATPLWAEDESFQLPDNLDALAGIIVGGGAVPSYINGLAPAAEQLSMLVRGGAPWLGFSAGAMAPCVTALAGGWKLQER QVGQQTGAEGFDEVTFVEGLGLVSLTISTHNDTLSGDGLIISAVESGLLSSAVAVDEATCLRIDASTGRTEVMGRGLVRW FTREVNGVLVRSQRSVTPETAPAPHKPRFDGLAKVAAATRAAHDKEERAKAARQRAEERRRARKSKSADDETKTSEGSAT PEDAPASAANPQAAADPTPTAGPEPDPLSDADPTAQPPMEDVKP >Mature_363_residues SLFLVGGGYDDSLVEAYDKFVSQARHHNADAPIAVVVAGPPSESADHAAELTRIVASRWVDANILTIYLDGPGTAPMMGA PATPLWAEDESFQLPDNLDALAGIIVGGGAVPSYINGLAPAAEQLSMLVRGGAPWLGFSAGAMAPCVTALAGGWKLQERQ VGQQTGAEGFDEVTFVEGLGLVSLTISTHNDTLSGDGLIISAVESGLLSSAVAVDEATCLRIDASTGRTEVMGRGLVRWF TREVNGVLVRSQRSVTPETAPAPHKPRFDGLAKVAAATRAAHDKEERAKAARQRAEERRRARKSKSADDETKTSEGSATP EDAPASAANPQAAADPTPTAGPEPDPLSDADPTAQPPMEDVKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37876; Mature: 37745
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFLVGGGYDDSLVEAYDKFVSQARHHNADAPIAVVVAGPPSESADHAAELTRIVASRW CEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHC VDANILTIYLDGPGTAPMMGAPATPLWAEDESFQLPDNLDALAGIIVGGGAVPSYINGLA CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHCC PAAEQLSMLVRGGAPWLGFSAGAMAPCVTALAGGWKLQERQVGQQTGAEGFDEVTFVEGL HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHCC GLVSLTISTHNDTLSGDGLIISAVESGLLSSAVAVDEATCLRIDASTGRTEVMGRGLVRW CEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHH FTREVNGVLVRSQRSVTPETAPAPHKPRFDGLAKVAAATRAAHDKEERAKAARQRAEERR HHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH RARKSKSADDETKTSEGSATPEDAPASAANPQAAADPTPTAGPEPDPLSDADPTAQPPME HHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH DVKP HCCC >Mature Secondary Structure SLFLVGGGYDDSLVEAYDKFVSQARHHNADAPIAVVVAGPPSESADHAAELTRIVASRW EEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHC VDANILTIYLDGPGTAPMMGAPATPLWAEDESFQLPDNLDALAGIIVGGGAVPSYINGLA CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHCC PAAEQLSMLVRGGAPWLGFSAGAMAPCVTALAGGWKLQERQVGQQTGAEGFDEVTFVEGL HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHCC GLVSLTISTHNDTLSGDGLIISAVESGLLSSAVAVDEATCLRIDASTGRTEVMGRGLVRW CEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHH FTREVNGVLVRSQRSVTPETAPAPHKPRFDGLAKVAAATRAAHDKEERAKAARQRAEERR HHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH RARKSKSADDETKTSEGSATPEDAPASAANPQAAADPTPTAGPEPDPLSDADPTAQPPME HHHHCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH DVKP HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA