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The map label for this gene is yagA [C]

Identifier: 50843542

GI number: 50843542

Start: 2278033

End: 2278341

Strand: Direct

Name: yagA [C]

Synonym: PPA2104

Alternate gene names: 50843542

Gene position: 2278033-2278341 (Clockwise)

Preceding gene: 50843541

Following gene: 50843544

Centisome position: 88.98

GC content: 66.67

Gene sequence:

>309_bases
GTGGAGCGGGTCCTGTCCGACAACGGCGGCGTCTACCGCTCACACCTGTGGCGCAACACCTGCAACGAGCTCGGCATCAA
GCACAAGCGCACCCGCCCGTACCGGCCGCAGACCAACAGCAAGATCGAACGGTTCCACCGCACCCTGGCCGACGGCTGGG
CCTACGCCCGCTGCTACACCTCCGAGGCGGAGCGCCGTGGCAAGCTCGGCGACTGGCTGCACTACTACAACCACCACCGG
CCCCACCCGGCCTGCGGGAACCAGCCACCCTTCTCACGATTGACCAACATCCCCGGTCAGTTCACTTAG

Upstream 100 bases:

>100_bases
CGTGATCGCCAACCCCGACGGCAACCTCATCCGGGTCAGCCCCGTCGACTGACCCGACAACCGATCCCCACGTGGCGGCG
AGCACCAGCGCGGCGTCACC

Downstream 100 bases:

>100_bases
CGGTGAACGTACAGGTAGTCACCCACGCAGACGACGCGCCCACCACGACCTAACCCTGATGGACGACATGGCAGCGCCAC
CCGGCACAAGGCAGGGACCG

Product: putative transposase

Products: NA

Alternate protein names: Integrase Catalytic Subunit; Integrase Catalytic Region; Integrase Family Protein; Transposase For ISMyma; ISBm3 Transposase Programmed; Histidine Kinase; ISAca1 Transposase; Transposase ; Integrase; Transposase For Tn; Integrase Catalytic Domain-Containing Protein; Insertion Element ISCmi2 Transposase; Insertion Sequence Transposase Protein; Transposase Integrase Domain; Transposase Undefined; Insertion Element; Transposase Of; LOW QUALITY PROTEIN Transposase ; ISBm3 Transposase Programmed Frameshift

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MERVLSDNGGVYRSHLWRNTCNELGIKHKRTRPYRPQTNSKIERFHRTLADGWAYARCYTSEAERRGKLGDWLHYYNHHR
PHPACGNQPPFSRLTNIPGQFT

Sequences:

>Translated_102_residues
MERVLSDNGGVYRSHLWRNTCNELGIKHKRTRPYRPQTNSKIERFHRTLADGWAYARCYTSEAERRGKLGDWLHYYNHHR
PHPACGNQPPFSRLTNIPGQFT
>Mature_102_residues
MERVLSDNGGVYRSHLWRNTCNELGIKHKRTRPYRPQTNSKIERFHRTLADGWAYARCYTSEAERRGKLGDWLHYYNHHR
PHPACGNQPPFSRLTNIPGQFT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12080; Mature: 12080

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERVLSDNGGVYRSHLWRNTCNELGIKHKRTRPYRPQTNSKIERFHRTLADGWAYARCYT
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SEAERRGKLGDWLHYYNHHRPHPACGNQPPFSRLTNIPGQFT
HHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCC
>Mature Secondary Structure
MERVLSDNGGVYRSHLWRNTCNELGIKHKRTRPYRPQTNSKIERFHRTLADGWAYARCYT
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SEAERRGKLGDWLHYYNHHRPHPACGNQPPFSRLTNIPGQFT
HHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA