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The map label for this gene is pqqE [H]

Identifier: 50843535

GI number: 50843535

Start: 2271658

End: 2272938

Strand: Direct

Name: pqqE [H]

Synonym: PPA2096

Alternate gene names: 50843535

Gene position: 2271658-2272938 (Clockwise)

Preceding gene: 50843534

Following gene: 50843536

Centisome position: 88.73

GC content: 62.37

Gene sequence:

>1281_bases
GTGACCATCACTGAGCACCCTGACCACCTGACCCGGCCCGGCAGTGCGCCCACAGGACACCCCGGCGGCCATCCGGGAGG
TCATCCAGGCCACAGCCCGCTCGTCCGCGAGATCAAGCACGACCTCAACAACAAGCCTTTCATCGTCATCTGGGAGGTTA
CCCGCGCCTGCGCCCTGGTCTGCCAGCATTGCCGCGCCGAGGCCCAGCACCATGCCGCCCCTGGCCAGCTCACCAACGCC
CAAGGCCACGAACTCATCAATCAGCTGACCAGCTACGAACGTCCCTACCCGATGCTCATCCTCACCGGCGGTGACTGTTT
CGAGCGCCCTGACCTCGTCGACCTCATCGAGTACGCCGTCAGCAAGGGCCTGCACGTGTCGATCTCGCCATCAGTGACCC
CGCTATTTACCCGCGACAGGGTTAGGGCAGTGCAGGAAGCTGGGGTGTCGATAATGTCGATGTCCTTGGATGGCGGCTCA
GCCACGACCCACGACGCCTTCCGGGGTTTCCCTGGCACTTTCGACCACACCGTCGAGGCCTGCCACATGCTTCGCGAGCT
AGGGATGAAGTTCCAGCTCAATACGGTGTTCACGGCTAAGAACATCCACGAGGCGCCACAGATGCTTAAGAACGCCATCG
ACCTCGGGGCGATGATGTTCTACACATTCATGTTGGTGCCGACCGGGCGTGGCGCCCAGCTCGATATGCTCTCGCCCCTG
GAGCGCGAGGACGTCCTGTATTGGCTGCACGACAACTCCACCCGCATTGCCATCAAGACGACCGAAGCCCCTCAGTATCG
GCGCATCGCTTTCCAGCGCGACGCCGTCCGCCAAGGCAAGGAGCGGCCGGTTCGCCACGGCGAGCTCTACGAGTGGCTGA
CCCGCGAAACCAACGAGCTGCTGGGCGAAACCATTACAGAACCGCGCCCGCCACGCACCCCACTGGCGATCAACTCTGGA
TCTGGGTTCGCGTTCATCGACCACACCGGTGATGTCTACCCGTCAGGGTTCCTACCGATCCACTGTGGGTCGATCAAGGA
GACGCCCTTCCCTGAGATCTACCGCGGATCGCCGGTTTTCCAGGGGTTGCGCAATCCGAATGGGTTCTCCGGCAAGTGCG
GAGCATGCAATTTCAACCACTTCTGCGGTGGGTCTCGTTCGACCGCCTACGCCTTGACCGGGGATTATCTCGCCTCTGAT
CCTTCGTGCGCCTATGTGCCGCCGGGTTATGACGGTGAACTACCCGAAGGGGTTCCCGCCGAGGGGATTCCGCAGATCTG
A

Upstream 100 bases:

>100_bases
TCCATGTGGGAGGGGCCGGTATCGACGGTGCCGGAGTTGGCACCGCAATTGCTGCTGGACGCCGTCTCGCACGCCACATC
ACCTCGAAGGAGGAGAATTA

Downstream 100 bases:

>100_bases
AATCTGGACGCCGTGACGGATTCGTCACGGCGTCTGCCGTATTCCGGGCATGGTCGACCAGTGCACATTGATCAGGGGCA
GCGTCGGTCGTGGCTGAACG

Product: molybdenum cofactor biosynthesis enzyme/coproporphyrinogen III oxidase

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MTITEHPDHLTRPGSAPTGHPGGHPGGHPGHSPLVREIKHDLNNKPFIVIWEVTRACALVCQHCRAEAQHHAAPGQLTNA
QGHELINQLTSYERPYPMLILTGGDCFERPDLVDLIEYAVSKGLHVSISPSVTPLFTRDRVRAVQEAGVSIMSMSLDGGS
ATTHDAFRGFPGTFDHTVEACHMLRELGMKFQLNTVFTAKNIHEAPQMLKNAIDLGAMMFYTFMLVPTGRGAQLDMLSPL
EREDVLYWLHDNSTRIAIKTTEAPQYRRIAFQRDAVRQGKERPVRHGELYEWLTRETNELLGETITEPRPPRTPLAINSG
SGFAFIDHTGDVYPSGFLPIHCGSIKETPFPEIYRGSPVFQGLRNPNGFSGKCGACNFNHFCGGSRSTAYALTGDYLASD
PSCAYVPPGYDGELPEGVPAEGIPQI

Sequences:

>Translated_426_residues
MTITEHPDHLTRPGSAPTGHPGGHPGGHPGHSPLVREIKHDLNNKPFIVIWEVTRACALVCQHCRAEAQHHAAPGQLTNA
QGHELINQLTSYERPYPMLILTGGDCFERPDLVDLIEYAVSKGLHVSISPSVTPLFTRDRVRAVQEAGVSIMSMSLDGGS
ATTHDAFRGFPGTFDHTVEACHMLRELGMKFQLNTVFTAKNIHEAPQMLKNAIDLGAMMFYTFMLVPTGRGAQLDMLSPL
EREDVLYWLHDNSTRIAIKTTEAPQYRRIAFQRDAVRQGKERPVRHGELYEWLTRETNELLGETITEPRPPRTPLAINSG
SGFAFIDHTGDVYPSGFLPIHCGSIKETPFPEIYRGSPVFQGLRNPNGFSGKCGACNFNHFCGGSRSTAYALTGDYLASD
PSCAYVPPGYDGELPEGVPAEGIPQI
>Mature_425_residues
TITEHPDHLTRPGSAPTGHPGGHPGGHPGHSPLVREIKHDLNNKPFIVIWEVTRACALVCQHCRAEAQHHAAPGQLTNAQ
GHELINQLTSYERPYPMLILTGGDCFERPDLVDLIEYAVSKGLHVSISPSVTPLFTRDRVRAVQEAGVSIMSMSLDGGSA
TTHDAFRGFPGTFDHTVEACHMLRELGMKFQLNTVFTAKNIHEAPQMLKNAIDLGAMMFYTFMLVPTGRGAQLDMLSPLE
REDVLYWLHDNSTRIAIKTTEAPQYRRIAFQRDAVRQGKERPVRHGELYEWLTRETNELLGETITEPRPPRTPLAINSGS
GFAFIDHTGDVYPSGFLPIHCGSIKETPFPEIYRGSPVFQGLRNPNGFSGKCGACNFNHFCGGSRSTAYALTGDYLASDP
SCAYVPPGYDGELPEGVPAEGIPQI

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 46863; Mature: 46731

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTITEHPDHLTRPGSAPTGHPGGHPGGHPGHSPLVREIKHDLNNKPFIVIWEVTRACALV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHH
CQHCRAEAQHHAAPGQLTNAQGHELINQLTSYERPYPMLILTGGDCFERPDLVDLIEYAV
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHH
SKGLHVSISPSVTPLFTRDRVRAVQEAGVSIMSMSLDGGSATTHDAFRGFPGTFDHTVEA
HCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHCCCCCCHHHHHHH
CHMLRELGMKFQLNTVFTAKNIHEAPQMLKNAIDLGAMMFYTFMLVPTGRGAQLDMLSPL
HHHHHHCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCC
EREDVLYWLHDNSTRIAIKTTEAPQYRRIAFQRDAVRQGKERPVRHGELYEWLTRETNEL
CCCCEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LGETITEPRPPRTPLAINSGSGFAFIDHTGDVYPSGFLPIHCGSIKETPFPEIYRGSPVF
HHHHHCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCHHHCCCHHH
QGLRNPNGFSGKCGACNFNHFCGGSRSTAYALTGDYLASDPSCAYVPPGYDGELPEGVPA
HHCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCHHCCCCCCEECCCCCCCCCCCCCCC
EGIPQI
CCCCCC
>Mature Secondary Structure 
TITEHPDHLTRPGSAPTGHPGGHPGGHPGHSPLVREIKHDLNNKPFIVIWEVTRACALV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHH
CQHCRAEAQHHAAPGQLTNAQGHELINQLTSYERPYPMLILTGGDCFERPDLVDLIEYAV
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHH
SKGLHVSISPSVTPLFTRDRVRAVQEAGVSIMSMSLDGGSATTHDAFRGFPGTFDHTVEA
HCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHCCCCCCHHHHHHH
CHMLRELGMKFQLNTVFTAKNIHEAPQMLKNAIDLGAMMFYTFMLVPTGRGAQLDMLSPL
HHHHHHCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCC
EREDVLYWLHDNSTRIAIKTTEAPQYRRIAFQRDAVRQGKERPVRHGELYEWLTRETNEL
CCCCEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LGETITEPRPPRTPLAINSGSGFAFIDHTGDVYPSGFLPIHCGSIKETPFPEIYRGSPVF
HHHHHCCCCCCCCCEEEECCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCHHHCCCHHH
QGLRNPNGFSGKCGACNFNHFCGGSRSTAYALTGDYLASDPSCAYVPPGYDGELPEGVPA
HHCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCHHCCCCCCEECCCCCCCCCCCCCCC
EGIPQI
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]