Definition Propionibacterium acnes KPA171202, complete genome.
Accession NC_006085
Length 2,560,265

Click here to switch to the map view.

The map label for this gene is 50843490

Identifier: 50843490

GI number: 50843490

Start: 2219764

End: 2220492

Strand: Reverse

Name: 50843490

Synonym: PPA2046

Alternate gene names: NA

Gene position: 2220492-2219764 (Counterclockwise)

Preceding gene: 50843491

Following gene: 50843488

Centisome position: 86.73

GC content: 60.63

Gene sequence:

>729_bases
ATGGGACACATTCTCGTGTTGTCGGGAGCTGGGCGTTATGCGGACAACATCCACGATTTTGACGCAACCTCCGAGGCTGT
CTCCCAGGTCTTGACTGAGCGGGGCCATCAGGTGGAGGTGAGGCGATCGTATCCGGAGGCCTTGGATCACCTCGCCGGCG
CGGATCTGCTCATCGTTAATACCGGGGGTGGCGACCCGGAGGAAGAGTGGGACTACATCCCGGAGTGGTCGCGCGCCCAC
AGCAAGATCCTGGAACATCACGAGGCTGGCAAGCCAATCCTCGGACTACACACTGCGTGCAACACCTTCTGTGACTGGGA
CCTGTGGTCGTCCATTCTTGGCGGTAAGTGGGTGCTAGGAGTGAGCGGACATCCTGAGAGGTCCTACGCCGTCTTTGAGC
CCATGCCGGAAGCGGCAGATCACCCGATTCTGCGTGGTGTTGAGCAGGTAGTGGTCTATGACGAGCGCTACTCCGACCTG
GACATCAACCCGCTCGCGACCCCGCTGCTGTTCCACGAGACCGGAGAGGAATTCCACCCGATGTGCTGGGTGATGGGCAA
TAGCGTCGTATATGACGGTCTGGGCCATTCGCCGCGCTCGTACTACTCGGCGTCGCGACGCCAGCTATTGTGCAACGAGG
TCTCGTGGCTGCTTAACTGGAAACGTCGCGAGGCTGCCGCCAAGGGCGCGGCTGAGGTTAATCCGTCGTCGACTCAGCCC
GTGCTTTGA

Upstream 100 bases:

>100_bases
GAGATTTCGACACCAAGCTGTAACGTCACCGGTTCGCCCTTTGCGAGTTAGTCTCCTAGTGTGATTCCTTGGGTTTACCC
AGAATCAGGAAGGAAGTCCG

Downstream 100 bases:

>100_bases
CAGCGTCAACGCTACGCACGGCGTCACTCCGTGGGAGCTCCGGCAAGGATCTTGGCGGTCGAGGAAACTCCTAGACGCGT
CGCCCCGGCCTCGACCATCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MGHILVLSGAGRYADNIHDFDATSEAVSQVLTERGHQVEVRRSYPEALDHLAGADLLIVNTGGGDPEEEWDYIPEWSRAH
SKILEHHEAGKPILGLHTACNTFCDWDLWSSILGGKWVLGVSGHPERSYAVFEPMPEAADHPILRGVEQVVVYDERYSDL
DINPLATPLLFHETGEEFHPMCWVMGNSVVYDGLGHSPRSYYSASRRQLLCNEVSWLLNWKRREAAAKGAAEVNPSSTQP
VL

Sequences:

>Translated_242_residues
MGHILVLSGAGRYADNIHDFDATSEAVSQVLTERGHQVEVRRSYPEALDHLAGADLLIVNTGGGDPEEEWDYIPEWSRAH
SKILEHHEAGKPILGLHTACNTFCDWDLWSSILGGKWVLGVSGHPERSYAVFEPMPEAADHPILRGVEQVVVYDERYSDL
DINPLATPLLFHETGEEFHPMCWVMGNSVVYDGLGHSPRSYYSASRRQLLCNEVSWLLNWKRREAAAKGAAEVNPSSTQP
VL
>Mature_241_residues
GHILVLSGAGRYADNIHDFDATSEAVSQVLTERGHQVEVRRSYPEALDHLAGADLLIVNTGGGDPEEEWDYIPEWSRAHS
KILEHHEAGKPILGLHTACNTFCDWDLWSSILGGKWVLGVSGHPERSYAVFEPMPEAADHPILRGVEQVVVYDERYSDLD
INPLATPLLFHETGEEFHPMCWVMGNSVVYDGLGHSPRSYYSASRRQLLCNEVSWLLNWKRREAAAKGAAEVNPSSTQPV
L

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26983; Mature: 26852

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGHILVLSGAGRYADNIHDFDATSEAVSQVLTERGHQVEVRRSYPEALDHLAGADLLIVN
CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCEEEEE
TGGGDPEEEWDYIPEWSRAHSKILEHHEAGKPILGLHTACNTFCDWDLWSSILGGKWVLG
CCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCHHHHHHHHCCCEEEE
VSGHPERSYAVFEPMPEAADHPILRGVEQVVVYDERYSDLDINPLATPLLFHETGEEFHP
CCCCCCCCEEEECCCCCCCCCHHHHHHHHHEEECCCCCCCCCCCCCCHHEEECCCCCCCC
MCWVMGNSVVYDGLGHSPRSYYSASRRQLLCNEVSWLLNWKRREAAAKGAAEVNPSSTQP
EEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
VL
CC
>Mature Secondary Structure 
GHILVLSGAGRYADNIHDFDATSEAVSQVLTERGHQVEVRRSYPEALDHLAGADLLIVN
CEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCEEEEE
TGGGDPEEEWDYIPEWSRAHSKILEHHEAGKPILGLHTACNTFCDWDLWSSILGGKWVLG
CCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCHHHHHHHHCCCEEEE
VSGHPERSYAVFEPMPEAADHPILRGVEQVVVYDERYSDLDINPLATPLLFHETGEEFHP
CCCCCCCCEEEECCCCCCCCCHHHHHHHHHEEECCCCCCCCCCCCCCHHEEECCCCCCCC
MCWVMGNSVVYDGLGHSPRSYYSASRRQLLCNEVSWLLNWKRREAAAKGAAEVNPSSTQP
EEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
VL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA