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The map label for this gene is ykoG [H]

Identifier: 50843487

GI number: 50843487

Start: 2217596

End: 2218327

Strand: Direct

Name: ykoG [H]

Synonym: PPA2043

Alternate gene names: 50843487

Gene position: 2217596-2218327 (Clockwise)

Preceding gene: 50843477

Following gene: 50843489

Centisome position: 86.62

GC content: 59.15

Gene sequence:

>732_bases
ATGGCATTCCCCACGCAACCTTCCAGATTCACCCGCGCTGACGGGTCCCCCATCCGCGTCCTGGTCGTTGAGGACGAACC
GAGCCTCACTGGGTTGCTCTCCATGGCCATGCGTTACGAGGGATGGGACGTCACCACCGCTAATTCCGGTGCTCATGCCG
TCCACGAAGCACAGGCCACCCGCCCTGACGTCATCGTCCTCGACATGAGGCTGTCTGATTTCGACGGTCTCGAAGTCATG
AGGCAGATCCGAATAAACCAGCCCACTGTTCGGGCGGTTTTCCTTACTGCCAAAGACGCCGCTAGTGGCCGTATCGCTGG
CCTCACCGCCGGCGGGGATGACTACGTCACCAAACCTTTCTCCCTCGAAGAGGTCATCGCCCGGTTACGCGCCCTCCTGC
GCCGTTCGGGGGCCACCGAACCCAAGCCCGACTCCATGTTGACGGTTGGAGACCTCACCCTTGACGAGAACTCCCGGGAG
GTACGCCGAGCAGGCGAAGAAATCCACCTGACGACCACCGAGTTCGAGCTGCTGCGCTACTTCATGCGCAACCCCAAGCG
AGTGCTCTCCAAAGCCCAGATCCTTGACCGAGTGTGGAATTACGATTTCAGAGGTCAAGCCAATGTCGTCGAGTTGTACA
TCTCTTACCTGCGCAAGAAGATCGACAGGGGACACAAACCGATGATCCACACCATGCGTGGGGCAGGTTACGTTCTCAAA
CCTGCAGAATGA

Upstream 100 bases:

>100_bases
GCCCCGGCCGCAGCAGGCGTTACACCGTTGCCCATCTTCATAGGAAGATAACAGGAGACCCATAAGGCAAAACGGACTTT
CCACGTGAAACCCTTAATCC

Downstream 100 bases:

>100_bases
GAGCGTCCAAGCGATTTCTCTCCTAGCCCGCCTATAGGCGATCACCCGCTCGCCTCGCGCTGGAACGAATCCCCCAAAGC
ACAGGTCTGCATGACATCTG

Product: putative two-component system response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MAFPTQPSRFTRADGSPIRVLVVEDEPSLTGLLSMAMRYEGWDVTTANSGAHAVHEAQATRPDVIVLDMRLSDFDGLEVM
RQIRINQPTVRAVFLTAKDAASGRIAGLTAGGDDYVTKPFSLEEVIARLRALLRRSGATEPKPDSMLTVGDLTLDENSRE
VRRAGEEIHLTTTEFELLRYFMRNPKRVLSKAQILDRVWNYDFRGQANVVELYISYLRKKIDRGHKPMIHTMRGAGYVLK
PAE

Sequences:

>Translated_243_residues
MAFPTQPSRFTRADGSPIRVLVVEDEPSLTGLLSMAMRYEGWDVTTANSGAHAVHEAQATRPDVIVLDMRLSDFDGLEVM
RQIRINQPTVRAVFLTAKDAASGRIAGLTAGGDDYVTKPFSLEEVIARLRALLRRSGATEPKPDSMLTVGDLTLDENSRE
VRRAGEEIHLTTTEFELLRYFMRNPKRVLSKAQILDRVWNYDFRGQANVVELYISYLRKKIDRGHKPMIHTMRGAGYVLK
PAE
>Mature_242_residues
AFPTQPSRFTRADGSPIRVLVVEDEPSLTGLLSMAMRYEGWDVTTANSGAHAVHEAQATRPDVIVLDMRLSDFDGLEVMR
QIRINQPTVRAVFLTAKDAASGRIAGLTAGGDDYVTKPFSLEEVIARLRALLRRSGATEPKPDSMLTVGDLTLDENSREV
RRAGEEIHLTTTEFELLRYFMRNPKRVLSKAQILDRVWNYDFRGQANVVELYISYLRKKIDRGHKPMIHTMRGAGYVLKP
AE

Specific function: Probable member of the two-component regulatory system ykoH/ykoG [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786784, Length=224, Percent_Identity=36.6071428571429, Blast_Score=150, Evalue=1e-37,
Organism=Escherichia coli, GI1786911, Length=220, Percent_Identity=37.2727272727273, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1790552, Length=226, Percent_Identity=36.7256637168142, Blast_Score=137, Evalue=5e-34,
Organism=Escherichia coli, GI1786599, Length=222, Percent_Identity=33.7837837837838, Blast_Score=134, Evalue=4e-33,
Organism=Escherichia coli, GI1790860, Length=224, Percent_Identity=35.7142857142857, Blast_Score=130, Evalue=9e-32,
Organism=Escherichia coli, GI1789402, Length=222, Percent_Identity=33.7837837837838, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1787375, Length=224, Percent_Identity=31.6964285714286, Blast_Score=117, Evalue=7e-28,
Organism=Escherichia coli, GI1788394, Length=226, Percent_Identity=33.6283185840708, Blast_Score=114, Evalue=7e-27,
Organism=Escherichia coli, GI1789809, Length=229, Percent_Identity=29.6943231441048, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI87082012, Length=221, Percent_Identity=29.8642533936652, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1787229, Length=232, Percent_Identity=34.051724137931, Blast_Score=107, Evalue=6e-25,
Organism=Escherichia coli, GI2367329, Length=232, Percent_Identity=31.0344827586207, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI1790863, Length=226, Percent_Identity=30.0884955752212, Blast_Score=98, Evalue=4e-22,
Organism=Escherichia coli, GI1788550, Length=107, Percent_Identity=31.7757009345794, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI145693140, Length=236, Percent_Identity=27.5423728813559, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI1790299, Length=108, Percent_Identity=30.5555555555556, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1790437, Length=116, Percent_Identity=28.448275862069, Blast_Score=67, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 27333; Mature: 27202

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFPTQPSRFTRADGSPIRVLVVEDEPSLTGLLSMAMRYEGWDVTTANSGAHAVHEAQAT
CCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCC
RPDVIVLDMRLSDFDGLEVMRQIRINQPTVRAVFLTAKDAASGRIAGLTAGGDDYVTKPF
CCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCC
SLEEVIARLRALLRRSGATEPKPDSMLTVGDLTLDENSREVRRAGEEIHLTTTEFELLRY
CHHHHHHHHHHHHHHCCCCCCCCCCEEEEECEEECCCHHHHHHCCCEEEEEHHHHHHHHH
FMRNPKRVLSKAQILDRVWNYDFRGQANVVELYISYLRKKIDRGHKPMIHTMRGAGYVLK
HHHCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHEEECCCCEEEE
PAE
CCC
>Mature Secondary Structure 
AFPTQPSRFTRADGSPIRVLVVEDEPSLTGLLSMAMRYEGWDVTTANSGAHAVHEAQAT
CCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCC
RPDVIVLDMRLSDFDGLEVMRQIRINQPTVRAVFLTAKDAASGRIAGLTAGGDDYVTKPF
CCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCC
SLEEVIARLRALLRRSGATEPKPDSMLTVGDLTLDENSREVRRAGEEIHLTTTEFELLRY
CHHHHHHHHHHHHHHCCCCCCCCCCEEEEECEEECCCHHHHHHCCCEEEEEHHHHHHHHH
FMRNPKRVLSKAQILDRVWNYDFRGQANVVELYISYLRKKIDRGHKPMIHTMRGAGYVLK
HHHCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHEEECCCCEEEE
PAE
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]