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The map label for this gene is 50843344

Identifier: 50843344

GI number: 50843344

Start: 2052718

End: 2053368

Strand: Reverse

Name: 50843344

Synonym: PPA1892

Alternate gene names: NA

Gene position: 2053368-2052718 (Counterclockwise)

Preceding gene: 50843345

Following gene: 50843343

Centisome position: 80.2

GC content: 60.22

Gene sequence:

>651_bases
GTGACCGACGAGAAGCGAAACCTCAGCGACGGAGACGATCCTTCCGTCAAGGGCGAGCTGTCTCCAAGGGGCGAGGATCT
GGCATCCAACAACCTTCCGGAGACTGACGAGTACGACGTTGTCGACCCAGAGGCTGAAGAGTTGACGACCCCAGACGATG
TCGTCGATAAGACTCCCGATAAGGCCGATCCCGAAGATATGGTTATTGACGACCCCGACCAGCTCGAAGGAGCGGAGGAG
GTCGCTGCGTCAGCTCGTTCTTCCCGGCCGGTGCGCAAGAAGGATTCTGCTGGCAAACCAGCCCGCCGCGGCAAGCCCGT
GCGCAAGGAAGCTAGCGCGGCTGATGAGGAGCCCGCTACCGCGTCTGCGGCTAAGTCTGCTGGCCCCGAGCCGAAGCGTA
AGCTGACGAAAGCTCCGGTTCGCAAGGAGCGTTCTCACCATAAGCCCGCCGATCAGGGCAAGCAACGCATTGGCCCGGTG
ACCTTCACTAAGCAGTCGGTTGCTGAGTTGCGCAAGGTCAAGTGGCCTAGTGGCGACGAGCTGGGACAGTACTTCCTCGT
CGTCCTCGTCTTTGTTCTGCTCATCATCGCCTACGTCAGTGGCTTGGACGTCGTCTTCGGATGGGTCGTCATCAAGCTCT
TTGGCCACTGA

Upstream 100 bases:

>100_bases
TGCCCTGCGAGACGCATGTGCGGGGCGTATCCCTGGTGCGCAGCCGTGGCGAAGTCCTGGTCCACGGCACCAACCGTCAG
GCAGGACCCGAAGGAATAGC

Downstream 100 bases:

>100_bases
CGATCACATTGGAGAATTGACCTGTGAGTGACAGCCCCCATTTCAGTGAAACTAACGACGTCGAGATTAACCTTGACGCG
TTAACCCCCGACACCGCCGA

Product: putative SecE/Sec61-gamma subunit of protein translocation complex

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MTDEKRNLSDGDDPSVKGELSPRGEDLASNNLPETDEYDVVDPEAEELTTPDDVVDKTPDKADPEDMVIDDPDQLEGAEE
VAASARSSRPVRKKDSAGKPARRGKPVRKEASAADEEPATASAAKSAGPEPKRKLTKAPVRKERSHHKPADQGKQRIGPV
TFTKQSVAELRKVKWPSGDELGQYFLVVLVFVLLIIAYVSGLDVVFGWVVIKLFGH

Sequences:

>Translated_216_residues
MTDEKRNLSDGDDPSVKGELSPRGEDLASNNLPETDEYDVVDPEAEELTTPDDVVDKTPDKADPEDMVIDDPDQLEGAEE
VAASARSSRPVRKKDSAGKPARRGKPVRKEASAADEEPATASAAKSAGPEPKRKLTKAPVRKERSHHKPADQGKQRIGPV
TFTKQSVAELRKVKWPSGDELGQYFLVVLVFVLLIIAYVSGLDVVFGWVVIKLFGH
>Mature_215_residues
TDEKRNLSDGDDPSVKGELSPRGEDLASNNLPETDEYDVVDPEAEELTTPDDVVDKTPDKADPEDMVIDDPDQLEGAEEV
AASARSSRPVRKKDSAGKPARRGKPVRKEASAADEEPATASAAKSAGPEPKRKLTKAPVRKERSHHKPADQGKQRIGPVT
FTKQSVAELRKVKWPSGDELGQYFLVVLVFVLLIIAYVSGLDVVFGWVVIKLFGH

Specific function: Unknown

COG id: COG0690

COG function: function code U; Preprotein translocase subunit SecE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23552; Mature: 23420

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS01067 SECE_SEC61G

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDEKRNLSDGDDPSVKGELSPRGEDLASNNLPETDEYDVVDPEAEELTTPDDVVDKTPD
CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHCCCCHHHHHCCCC
KADPEDMVIDDPDQLEGAEEVAASARSSRPVRKKDSAGKPARRGKPVRKEASAADEEPAT
CCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCHHHHHCCCCCCCH
ASAAKSAGPEPKRKLTKAPVRKERSHHKPADQGKQRIGPVTFTKQSVAELRKVKWPSGDE
HHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHH
LGQYFLVVLVFVLLIIAYVSGLDVVFGWVVIKLFGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TDEKRNLSDGDDPSVKGELSPRGEDLASNNLPETDEYDVVDPEAEELTTPDDVVDKTPD
CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHCCCCHHHHHCCCC
KADPEDMVIDDPDQLEGAEEVAASARSSRPVRKKDSAGKPARRGKPVRKEASAADEEPAT
CCCCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHCCCCCHHHHHCCCCCCCH
ASAAKSAGPEPKRKLTKAPVRKERSHHKPADQGKQRIGPVTFTKQSVAELRKVKWPSGDE
HHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHH
LGQYFLVVLVFVLLIIAYVSGLDVVFGWVVIKLFGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA