| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50843336
Identifier: 50843336
GI number: 50843336
Start: 2039927
End: 2040973
Strand: Reverse
Name: 50843336
Synonym: PPA1882
Alternate gene names: NA
Gene position: 2040973-2039927 (Counterclockwise)
Preceding gene: 50843337
Following gene: 50843335
Centisome position: 79.72
GC content: 57.21
Gene sequence:
>1047_bases GTGACTCCTGGGCTGCCCGTCTATGAACCACCCGTCGCGTTGGAAAGAAGTGATATGCAGACTAAGAAAAACCTACGAAG GCCGGTGCTATTAGCCGCCCTCATGACCGTGATTGCGTCGCTGTTTGCGCCGATGTCATGGGCCACGGACGCAAAGGTGG TCTTGAGTAAAAATCACACGGACGCCTTTTACATCACCATTGACAGCGGTGTCCCCGTCGTCAAGGTTGCCAATGGGCTC CACTCGCGGATGTATGAGCCAAACGAGGTCGAATTCCAAATCCAGTCGGACACGTACGGCAGGCAGTACAGGCTCACGGG GCTGAGTGAGTCACTTCTTGAGGGCTACTACACCGGCAGTGAGAATACCGCCGAATGGTTTGAACCTGGCTGGAATGCTC CGGGCTTCACAAAGAATGGGTTCGACGCATTGCGCGTTGACTTCACCTCGATCACGGGTCCAGGCAAGATGTACCTCGTC GGTAATTCACCTGAGGCAGACGAGAACGGCAAGCTTGGCACCTTCCTTGCCGGTGACACATATCAGGTTGTCAAAGGGGC TTCATTGCCGATTAAGGGTCATCAGCATGCCCACTGGTTTTTCACTCGCGCCGGCAAATACACCATGAGTGGGGTTGCTG TCGGTAAGAAGATTGACGGGAAGGAAGTTTCGTCGCAGCCGTTCACCCTGTCGTGGGAGGTGCTGAAGTCCGACGACGAC AAGCGGCCTGGTGCTTCTGACGACTCGGACGAGCCTTCCGCTGAGCCGTTGCGCGATCCGTCGGAAGAGCCGTCCAGTGC GCCCCACGACGCGGCAACGCCGAAGATTGATGACACTAAGGTCGAGATTACCCAAGGTCATCTTGACGTCTTCGCTGGTA TCGCCCGCAACCGCAAGCTGTCGATGGTCATCAAGGATGACCGCAGTGGCCAGGCCATTTACCGGGCACCCGAGGCGGTG ACATTGCGCGTCGGGGAGAATGCCTACCGGAAATTACCCCAGAGCATGCACGACCGCTTCGCGCCCGAGGGGTATCTTCT GGCCTAA
Upstream 100 bases:
>100_bases GGCCTTGGAGCTTCGTGGGGTGGAGGCTTGAGCTATTAATGCGAAAGACTATCAATATCATGTAGCATGATGGTGGTTCT CTCGCCAGGGATATGCGTAG
Downstream 100 bases:
>100_bases AATGGCGACAATCAACAGGAGGTACTGTTCCCGGGCTGGGACACCTATGGCGTTGCACCTGATTTCGGGGCTGTTGACCT CGAGTTTGTCGATGTGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MTPGLPVYEPPVALERSDMQTKKNLRRPVLLAALMTVIASLFAPMSWATDAKVVLSKNHTDAFYITIDSGVPVVKVANGL HSRMYEPNEVEFQIQSDTYGRQYRLTGLSESLLEGYYTGSENTAEWFEPGWNAPGFTKNGFDALRVDFTSITGPGKMYLV GNSPEADENGKLGTFLAGDTYQVVKGASLPIKGHQHAHWFFTRAGKYTMSGVAVGKKIDGKEVSSQPFTLSWEVLKSDDD KRPGASDDSDEPSAEPLRDPSEEPSSAPHDAATPKIDDTKVEITQGHLDVFAGIARNRKLSMVIKDDRSGQAIYRAPEAV TLRVGENAYRKLPQSMHDRFAPEGYLLA
Sequences:
>Translated_348_residues MTPGLPVYEPPVALERSDMQTKKNLRRPVLLAALMTVIASLFAPMSWATDAKVVLSKNHTDAFYITIDSGVPVVKVANGL HSRMYEPNEVEFQIQSDTYGRQYRLTGLSESLLEGYYTGSENTAEWFEPGWNAPGFTKNGFDALRVDFTSITGPGKMYLV GNSPEADENGKLGTFLAGDTYQVVKGASLPIKGHQHAHWFFTRAGKYTMSGVAVGKKIDGKEVSSQPFTLSWEVLKSDDD KRPGASDDSDEPSAEPLRDPSEEPSSAPHDAATPKIDDTKVEITQGHLDVFAGIARNRKLSMVIKDDRSGQAIYRAPEAV TLRVGENAYRKLPQSMHDRFAPEGYLLA >Mature_347_residues TPGLPVYEPPVALERSDMQTKKNLRRPVLLAALMTVIASLFAPMSWATDAKVVLSKNHTDAFYITIDSGVPVVKVANGLH SRMYEPNEVEFQIQSDTYGRQYRLTGLSESLLEGYYTGSENTAEWFEPGWNAPGFTKNGFDALRVDFTSITGPGKMYLVG NSPEADENGKLGTFLAGDTYQVVKGASLPIKGHQHAHWFFTRAGKYTMSGVAVGKKIDGKEVSSQPFTLSWEVLKSDDDK RPGASDDSDEPSAEPLRDPSEEPSSAPHDAATPKIDDTKVEITQGHLDVFAGIARNRKLSMVIKDDRSGQAIYRAPEAVT LRVGENAYRKLPQSMHDRFAPEGYLLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38247; Mature: 38116
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPGLPVYEPPVALERSDMQTKKNLRRPVLLAALMTVIASLFAPMSWATDAKVVLSKNHT CCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCC DAFYITIDSGVPVVKVANGLHSRMYEPNEVEFQIQSDTYGRQYRLTGLSESLLEGYYTGS CEEEEEECCCCCEEEHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCHHHHHHHEECCC ENTAEWFEPGWNAPGFTKNGFDALRVDFTSITGPGKMYLVGNSPEADENGKLGTFLAGDT CCCHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCEEEEEECCC YQVVKGASLPIKGHQHAHWFFTRAGKYTMSGVAVGKKIDGKEVSSQPFTLSWEVLKSDDD EEECCCCCCCCCCCCCCEEEEEECCCEEECEEEECCCCCCCCCCCCCEEEEEEEEECCCC KRPGASDDSDEPSAEPLRDPSEEPSSAPHDAATPKIDDTKVEITQGHLDVFAGIARNRKL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCEE SMVIKDDRSGQAIYRAPEAVTLRVGENAYRKLPQSMHDRFAPEGYLLA EEEEECCCCCCEEEECCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEC >Mature Secondary Structure TPGLPVYEPPVALERSDMQTKKNLRRPVLLAALMTVIASLFAPMSWATDAKVVLSKNHT CCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCC DAFYITIDSGVPVVKVANGLHSRMYEPNEVEFQIQSDTYGRQYRLTGLSESLLEGYYTGS CEEEEEECCCCCEEEHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCHHHHHHHEECCC ENTAEWFEPGWNAPGFTKNGFDALRVDFTSITGPGKMYLVGNSPEADENGKLGTFLAGDT CCCHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCCCCEEEEEECCC YQVVKGASLPIKGHQHAHWFFTRAGKYTMSGVAVGKKIDGKEVSSQPFTLSWEVLKSDDD EEECCCCCCCCCCCCCCEEEEEECCCEEECEEEECCCCCCCCCCCCCEEEEEEEEECCCC KRPGASDDSDEPSAEPLRDPSEEPSSAPHDAATPKIDDTKVEITQGHLDVFAGIARNRKL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCEE SMVIKDDRSGQAIYRAPEAVTLRVGENAYRKLPQSMHDRFAPEGYLLA EEEEECCCCCCEEEECCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA