Click here to switch to the map view.

The map label for this gene is btuC [C]

Identifier: 50843239

GI number: 50843239

Start: 1942717

End: 1943811

Strand: Reverse

Name: btuC [C]

Synonym: PPA1779

Alternate gene names: 50843239

Gene position: 1943811-1942717 (Counterclockwise)

Preceding gene: 50843240

Following gene: 50843238

Centisome position: 75.92

GC content: 60.55

Gene sequence:

>1095_bases
GTGAGTAACACTGACATGTCCCTTGCCCGGGAGGATCCTGCCACCGGAATGGTGGCTGTGGTGAGGGGATACTACCGGCG
TGCCCGTTGGAAGCGCTGGGCCATTGTCCTGCTTTCGGTCATTGCGGTGGCTGCTTTCCTAGTCACCATCGTGGTTGGCC
CCGTGGACATCACTCTTCCCCAGCTGCTGAGAGCACTGGTCAATCCCTCCACGGTGGATGCTCAGACCAGAATGGTGCTG
TGGCAATTGCGCATTCCGTCGTCGGTGATGGCGGTACTCATTGGGGTGTGCCTTTCGCTCGCAGGCGCGCACATGCAGAC
CATCCTGGACAACCCGCTGGCAGAACCTTTCACGTTAGGGATCTCTGCAGCAGCAGCTTTTGGGGCGGCCGCCTCTATCG
TCTTGGGGTGGACGATCATTCCCAATTCCCAATTCAACGTGGCGGTCTGCGCAGCAGTGGCATCCCTTGTTGCGGTTGCC
ATTGTTGCCGCTGTCTCACGCCGCCGTGAAGATGGCCGGGAGTCCATGATCCTGCTTGGTATCGCCCTGGTATTCGGATT
CCATGCGCTCCTGGCGCTCTTGCAGTACCGAGCCACCCCGGAGGCCCTCCAACAGATCGTCTTCTGGACGATGGGCTCCT
TTCAACGGGCTACGTGGACTTCGAATGCCATCATCGCCGCCGTCCTGGCTATCGTTATTCCCATCACGATCAGGCATTCG
GGGCAGCTGACCGCGTTGAGACTCGGAGATGAACGTGCTGCCGCCATGGGGGTGAATGTGCCCCGGCTGAGGTCGCGAAT
CCTTATTCTGGCGTCACTGCTGGCAGCCGTTACCGTCGCCTTTGCTGGGGTCATCGGATTCGTCGGTCTGGTCGGTCCCC
ATGTCGCCCGCATCCTGGTTGGCGAGGAGCAGCGATACTTCGCCCCTGCCTCCGCAGCTACTGGGGCCTTCCTACTAGCC
ACCGCCCATGCCCTGTCGATCACCATCATCCCTGGGGTGGCGATACCTATTGGGATCATCACCGCGCTAGTGGGGGTGCC
AGTATTCGTTTCCCTCATCCTCACTCGGCATCGTGTCTTCGGAGGGGCATCGTGA

Upstream 100 bases:

>100_bases
GGTGTCGACCTAACGAAGGATTTCGCTAAATTCCATGAGGACTACTTGCCTTTTGGCTACCGCGGCGTGTTTTTCGTCAC
GCTGAAGAAGTGAATCCGAC

Downstream 100 bases:

>100_bases
ACATCCGCCTGTCTAACCTGCACTTGTCTTACGGGCAGCGTCACGTACTCGACGGGGTGAGCCTCGGTCCGCTGGAGCGG
GGGACGGTCACTGGGCTGCT

Product: Fe(III) dicitrate ABC transporter, permease

Products: ADP; phosphate; cob(I)alamin [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 363

Protein sequence:

>364_residues
MSNTDMSLAREDPATGMVAVVRGYYRRARWKRWAIVLLSVIAVAAFLVTIVVGPVDITLPQLLRALVNPSTVDAQTRMVL
WQLRIPSSVMAVLIGVCLSLAGAHMQTILDNPLAEPFTLGISAAAAFGAAASIVLGWTIIPNSQFNVAVCAAVASLVAVA
IVAAVSRRREDGRESMILLGIALVFGFHALLALLQYRATPEALQQIVFWTMGSFQRATWTSNAIIAAVLAIVIPITIRHS
GQLTALRLGDERAAAMGVNVPRLRSRILILASLLAAVTVAFAGVIGFVGLVGPHVARILVGEEQRYFAPASAATGAFLLA
TAHALSITIIPGVAIPIGIITALVGVPVFVSLILTRHRVFGGAS

Sequences:

>Translated_364_residues
MSNTDMSLAREDPATGMVAVVRGYYRRARWKRWAIVLLSVIAVAAFLVTIVVGPVDITLPQLLRALVNPSTVDAQTRMVL
WQLRIPSSVMAVLIGVCLSLAGAHMQTILDNPLAEPFTLGISAAAAFGAAASIVLGWTIIPNSQFNVAVCAAVASLVAVA
IVAAVSRRREDGRESMILLGIALVFGFHALLALLQYRATPEALQQIVFWTMGSFQRATWTSNAIIAAVLAIVIPITIRHS
GQLTALRLGDERAAAMGVNVPRLRSRILILASLLAAVTVAFAGVIGFVGLVGPHVARILVGEEQRYFAPASAATGAFLLA
TAHALSITIIPGVAIPIGIITALVGVPVFVSLILTRHRVFGGAS
>Mature_363_residues
SNTDMSLAREDPATGMVAVVRGYYRRARWKRWAIVLLSVIAVAAFLVTIVVGPVDITLPQLLRALVNPSTVDAQTRMVLW
QLRIPSSVMAVLIGVCLSLAGAHMQTILDNPLAEPFTLGISAAAAFGAAASIVLGWTIIPNSQFNVAVCAAVASLVAVAI
VAAVSRRREDGRESMILLGIALVFGFHALLALLQYRATPEALQQIVFWTMGSFQRATWTSNAIIAAVLAIVIPITIRHSG
QLTALRLGDERAAAMGVNVPRLRSRILILASLLAAVTVAFAGVIGFVGLVGPHVARILVGEEQRYFAPASAATGAFLLAT
AHALSITIIPGVAIPIGIITALVGVPVFVSLILTRHRVFGGAS

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788004, Length=282, Percent_Identity=31.9148936170213, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI1790740, Length=299, Percent_Identity=31.7725752508361, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1790741, Length=277, Percent_Identity=35.3790613718412, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1786347, Length=280, Percent_Identity=31.7857142857143, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI1786805, Length=266, Percent_Identity=31.5789473684211, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI1786804, Length=284, Percent_Identity=27.8169014084507, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 38342; Mature: 38211

Theoretical pI: Translated: 11.67; Mature: 11.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNTDMSLAREDPATGMVAVVRGYYRRARWKRWAIVLLSVIAVAAFLVTIVVGPVDITLP
CCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
QLLRALVNPSTVDAQTRMVLWQLRIPSSVMAVLIGVCLSLAGAHMQTILDNPLAEPFTLG
HHHHHHCCCCCCCHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ISAAAAFGAAASIVLGWTIIPNSQFNVAVCAAVASLVAVAIVAAVSRRREDGRESMILLG
HHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IALVFGFHALLALLQYRATPEALQQIVFWTMGSFQRATWTSNAIIAAVLAIVIPITIRHS
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHEECC
GQLTALRLGDERAAAMGVNVPRLRSRILILASLLAAVTVAFAGVIGFVGLVGPHVARILV
CCEEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GEEQRYFAPASAATGAFLLATAHALSITIIPGVAIPIGIITALVGVPVFVSLILTRHRVF
CCCCCCCCCCHHCCHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GGAS
CCCC
>Mature Secondary Structure 
SNTDMSLAREDPATGMVAVVRGYYRRARWKRWAIVLLSVIAVAAFLVTIVVGPVDITLP
CCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
QLLRALVNPSTVDAQTRMVLWQLRIPSSVMAVLIGVCLSLAGAHMQTILDNPLAEPFTLG
HHHHHHCCCCCCCHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ISAAAAFGAAASIVLGWTIIPNSQFNVAVCAAVASLVAVAIVAAVSRRREDGRESMILLG
HHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
IALVFGFHALLALLQYRATPEALQQIVFWTMGSFQRATWTSNAIIAAVLAIVIPITIRHS
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHEECC
GQLTALRLGDERAAAMGVNVPRLRSRILILASLLAAVTVAFAGVIGFVGLVGPHVARILV
CCEEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GEEQRYFAPASAATGAFLLATAHALSITIIPGVAIPIGIITALVGVPVFVSLILTRHRVF
CCCCCCCCCCHHCCHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GGAS
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; cob(I)alamin [Periplasm]; H2O [C]

Specific reaction: ATP + cob(I)alamin [Periplasm] + H2O = ADP + phosphate + cob(I)alamin [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]