| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50843234
Identifier: 50843234
GI number: 50843234
Start: 1938143
End: 1939147
Strand: Reverse
Name: 50843234
Synonym: PPA1774
Alternate gene names: NA
Gene position: 1939147-1938143 (Counterclockwise)
Preceding gene: 50843235
Following gene: 50843233
Centisome position: 75.74
GC content: 57.81
Gene sequence:
>1005_bases ATGCCCATGCTGAATGTTTCGCGTCATATGAGACGCTGTCTCGTTTTGATTATCGCGCCCCTCTTACTGCTTGCCGGGTG CGCAAAATTTGATACTGCCATGGAGATCAAGGATGAGAATCACGTCCACCTCAAAAGTACGGTTGGTGTCTCCAAGTCAA TAGCCAGTACGTCGGCTGGCTCCCTCGCCTCTGAGTTTTCCGACTGCAACAACTCGAAGGGGTCCGCCGGTACCGGCTCG GACGGCACGGTCGAGAAGTTCGAGGACAATAGTTACATCGGGTGCATCATTGCCGGGGAGACCACCGCTGCTGATCTCAA CAAAGAGGATGGCATGCAGATCACCTTCGACAAAAACAAGGTGTCTTTCAAGATGACCTCGGACTTGTTCCGCGATAGCG GGCGCTCCGACCGTACTCCTGACGCGAGTATGTTCAGCGACTTTAAGGTGTCTGTGACCTTCCCGGGCAAGGTCCTCAGC CATTCTGGATCGAGCAAGGTCGATGGGAACACCGTTACCTGGACCGATCCGAGCGATTTGTTCTCCAGTTCGGGGCTGAC CGCGACGAGCAAGCGCTCCAACGGCATACCGATCTGGGTCTGGATCATTGTCGCCGTCGCCGTCCTGGCCATTGTCGGCG TTGTTGTGGTCATCCTTAACAAGAAAAAGGGACAGAAGGCAGGACAACCGGAGAATGGTGGTGCTCCGTGGACCATGCAG TACCCAGGTGACGGACAGCCACAGGGGCAGCCGCAGCAGTGGAACGGTCAGCTTTACCAGGGCGACCCCTACGCGCAGCC TCCTTACCAGGATCCGAGTTACCAGGATCCGAGGCAACAGGAGCCGGGTCAGCTCTGGGGCAATCAGCCTCTAGGCCATG TCTCGGGCGGCGCGACGAGTGCGTCTCAGACCGGCCAGAACCCGATCCCTAATCAGGGCTCGCAGCCGGGTCAGCAGCCC CCGTCAGACCCTGATGACTTCTGGAAGAACCACGGCTCTTACTGA
Upstream 100 bases:
>100_bases TAGCTACTGGTTCTAGGCATTCCGTGCGCCTTGGGTAGTTGAGAAACTGTCAGCACATTTGTACGGAAGTTACCCCTACC GCTCCCGTTCGTGGTTTTAT
Downstream 100 bases:
>100_bases GGTTGCTGACTTTTGCCGGGGCATTTCTGGCACTCCCGTTGCCTGAGTGCCAACTCCGGGTGTACTTTCGTGGTTGGCAC TCTCGTGGTGAGTGTGCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MPMLNVSRHMRRCLVLIIAPLLLLAGCAKFDTAMEIKDENHVHLKSTVGVSKSIASTSAGSLASEFSDCNNSKGSAGTGS DGTVEKFEDNSYIGCIIAGETTAADLNKEDGMQITFDKNKVSFKMTSDLFRDSGRSDRTPDASMFSDFKVSVTFPGKVLS HSGSSKVDGNTVTWTDPSDLFSSSGLTATSKRSNGIPIWVWIIVAVAVLAIVGVVVVILNKKKGQKAGQPENGGAPWTMQ YPGDGQPQGQPQQWNGQLYQGDPYAQPPYQDPSYQDPRQQEPGQLWGNQPLGHVSGGATSASQTGQNPIPNQGSQPGQQP PSDPDDFWKNHGSY
Sequences:
>Translated_334_residues MPMLNVSRHMRRCLVLIIAPLLLLAGCAKFDTAMEIKDENHVHLKSTVGVSKSIASTSAGSLASEFSDCNNSKGSAGTGS DGTVEKFEDNSYIGCIIAGETTAADLNKEDGMQITFDKNKVSFKMTSDLFRDSGRSDRTPDASMFSDFKVSVTFPGKVLS HSGSSKVDGNTVTWTDPSDLFSSSGLTATSKRSNGIPIWVWIIVAVAVLAIVGVVVVILNKKKGQKAGQPENGGAPWTMQ YPGDGQPQGQPQQWNGQLYQGDPYAQPPYQDPSYQDPRQQEPGQLWGNQPLGHVSGGATSASQTGQNPIPNQGSQPGQQP PSDPDDFWKNHGSY >Mature_333_residues PMLNVSRHMRRCLVLIIAPLLLLAGCAKFDTAMEIKDENHVHLKSTVGVSKSIASTSAGSLASEFSDCNNSKGSAGTGSD GTVEKFEDNSYIGCIIAGETTAADLNKEDGMQITFDKNKVSFKMTSDLFRDSGRSDRTPDASMFSDFKVSVTFPGKVLSH SGSSKVDGNTVTWTDPSDLFSSSGLTATSKRSNGIPIWVWIIVAVAVLAIVGVVVVILNKKKGQKAGQPENGGAPWTMQY PGDGQPQGQPQQWNGQLYQGDPYAQPPYQDPSYQDPRQQEPGQLWGNQPLGHVSGGATSASQTGQNPIPNQGSQPGQQPP SDPDDFWKNHGSY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35754; Mature: 35623
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMLNVSRHMRRCLVLIIAPLLLLAGCAKFDTAMEIKDENHVHLKSTVGVSKSIASTSAG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEHHCCCHHHHHHCCHH SLASEFSDCNNSKGSAGTGSDGTVEKFEDNSYIGCIIAGETTAADLNKEDGMQITFDKNK HHHHHHHHCCCCCCCCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCEEEECCCE VSFKMTSDLFRDSGRSDRTPDASMFSDFKVSVTFPGKVLSHSGSSKVDGNTVTWTDPSDL EEEEEHHHHHHCCCCCCCCCCHHHHCCEEEEEEECCHHHHCCCCCCCCCCEEEECCHHHH FSSSGLTATSKRSNGIPIWVWIIVAVAVLAIVGVVVVILNKKKGQKAGQPENGGAPWTMQ HHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE YPGDGQPQGQPQQWNGQLYQGDPYAQPPYQDPSYQDPRQQEPGQLWGNQPLGHVSGGATS CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCC ASQTGQNPIPNQGSQPGQQPPSDPDDFWKNHGSY HHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC >Mature Secondary Structure PMLNVSRHMRRCLVLIIAPLLLLAGCAKFDTAMEIKDENHVHLKSTVGVSKSIASTSAG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEHHCCCHHHHHHCCHH SLASEFSDCNNSKGSAGTGSDGTVEKFEDNSYIGCIIAGETTAADLNKEDGMQITFDKNK HHHHHHHHCCCCCCCCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCCCEEEECCCE VSFKMTSDLFRDSGRSDRTPDASMFSDFKVSVTFPGKVLSHSGSSKVDGNTVTWTDPSDL EEEEEHHHHHHCCCCCCCCCCHHHHCCEEEEEEECCHHHHCCCCCCCCCCEEEECCHHHH FSSSGLTATSKRSNGIPIWVWIIVAVAVLAIVGVVVVILNKKKGQKAGQPENGGAPWTMQ HHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE YPGDGQPQGQPQQWNGQLYQGDPYAQPPYQDPSYQDPRQQEPGQLWGNQPLGHVSGGATS CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCC ASQTGQNPIPNQGSQPGQQPPSDPDDFWKNHGSY HHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA