| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is yggV [C]
Identifier: 50843136
GI number: 50843136
Start: 1826898
End: 1827512
Strand: Reverse
Name: yggV [C]
Synonym: PPA1673
Alternate gene names: 50843136
Gene position: 1827512-1826898 (Counterclockwise)
Preceding gene: 50843137
Following gene: 50843135
Centisome position: 71.38
GC content: 60.49
Gene sequence:
>615_bases ATGAGCCGGATTGTGCTGGCATCCAATAATGCTAAGAAGCTGGTCGAGCTGCGTCGCACTTTCGAGGGAGCAGACACCGA GGTCGAAATCGTCGGTTTGTCGGAGGTCAGCGATGCCCCGGCACCGGAGGAGACCGGTAGAACCTTTGTGGAGAATGCCC TCATCAAGGCTCGTGCTGCGGCCCACGAAACCGGTTTGCCTGCTTTGGCTGACGACTCCGGACTCGAGGTTGACGCCCTC AACCGGATGCCCGGTATCCGTTCAGCACGCTGGTCGGGGCCTCACGCTCATGATGAGCGCAACCTTCAGCTGCTGCTTGA TCAGACTTTTGACCTTCCGGACGAGCGACGTCACGGTAGGTTCGTATGTGCGATGGCTTTCGTCGACCCGGACGGCACCG AGATCACCAAGGTGGCGACGATGGAGGGGCGGATCATCTCGGAGGCCCGCGGGAAAAACGGGTTTGGTTATGACCCGATG TTTGTTCCCGATGCCCAGCCCGGTGACCTCACCAGTGCTGAGATGACTCCTGAGGTCAAGGACGCCATCAGCCACCGAGG ACAAGCTGTTCGCGCGATTGTTCCGGCGGTCGTCGCCCATTTGGAGGGGCGCTGA
Upstream 100 bases:
>100_bases CCCCCTTTAACCGCAACTTGCTCAATGAGTTGCTCGATCTAGCCGCCGGCGGCTGCGCAACCCTCAAGCAGGCCCAGTCC GAGGCTTTGGGGGTGACGTT
Downstream 100 bases:
>100_bases ATGCAGATCTACCTCGACTTGTTGCGGCGGATCCTTGACGAGGGCGTGCGCCGCGAGGACCGTACCGGAACGGGGACGGT CAGCGTCTTCGGTCACCAGA
Product: putative nucleoside-triphosphatase
Products: NA
Alternate protein names: Nucleoside triphosphate phosphohydrolase; NTPase
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MSRIVLASNNAKKLVELRRTFEGADTEVEIVGLSEVSDAPAPEETGRTFVENALIKARAAAHETGLPALADDSGLEVDAL NRMPGIRSARWSGPHAHDERNLQLLLDQTFDLPDERRHGRFVCAMAFVDPDGTEITKVATMEGRIISEARGKNGFGYDPM FVPDAQPGDLTSAEMTPEVKDAISHRGQAVRAIVPAVVAHLEGR
Sequences:
>Translated_204_residues MSRIVLASNNAKKLVELRRTFEGADTEVEIVGLSEVSDAPAPEETGRTFVENALIKARAAAHETGLPALADDSGLEVDAL NRMPGIRSARWSGPHAHDERNLQLLLDQTFDLPDERRHGRFVCAMAFVDPDGTEITKVATMEGRIISEARGKNGFGYDPM FVPDAQPGDLTSAEMTPEVKDAISHRGQAVRAIVPAVVAHLEGR >Mature_203_residues SRIVLASNNAKKLVELRRTFEGADTEVEIVGLSEVSDAPAPEETGRTFVENALIKARAAAHETGLPALADDSGLEVDALN RMPGIRSARWSGPHAHDERNLQLLLDQTFDLPDERRHGRFVCAMAFVDPDGTEITKVATMEGRIISEARGKNGFGYDPMF VPDAQPGDLTSAEMTPEVKDAISHRGQAVRAIVPAVVAHLEGR
Specific function: Hydrolyzes non-standard nucleotides such as XTP and dITP/ITP. Might exclude non-standard purines from DNA precursor pool, preventing thus incorporation into DNA and avoiding chromosomal lesions
COG id: COG0127
COG function: function code F; Xanthosine triphosphate pyrophosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAM1 NTPase family
Homologues:
Organism=Escherichia coli, GI1789324, Length=200, Percent_Identity=45, Blast_Score=153, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6322529, Length=191, Percent_Identity=29.8429319371728, Blast_Score=68, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NTPA_PROAC (Q6A760)
Other databases:
- EMBL: AE017283 - RefSeq: YP_056363.1 - ProteinModelPortal: Q6A760 - SMR: Q6A760 - GeneID: 2931364 - GenomeReviews: AE017283_GR - KEGG: pac:PPA1673 - NMPDR: fig|267747.1.peg.1640 - HOGENOM: HBG697237 - OMA: VYTADWA - ProtClustDB: CLSK2764099 - BioCyc: PACN267747:PPA1673-MONOMER - BRENDA: 3.6.1.15 - HAMAP: MF_01405 - InterPro: IPR002637 - InterPro: IPR020922 - PANTHER: PTHR11067 - TIGRFAMs: TIGR00042
Pfam domain/function: PF01725 Ham1p_like
EC number: =3.6.1.15
Molecular weight: Translated: 22107; Mature: 21976
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRIVLASNNAKKLVELRRTFEGADTEVEIVGLSEVSDAPAPEETGRTFVENALIKARAA CCEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH AHETGLPALADDSGLEVDALNRMPGIRSARWSGPHAHDERNLQLLLDQTFDLPDERRHGR HHHCCCCCCCCCCCCEEHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC FVCAMAFVDPDGTEITKVATMEGRIISEARGKNGFGYDPMFVPDAQPGDLTSAEMTPEVK EEEEEEEECCCCCCEEEEEECCCEEEHHHCCCCCCCCCCEECCCCCCCCCCCCCCCHHHH DAISHRGQAVRAIVPAVVAHLEGR HHHHHCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SRIVLASNNAKKLVELRRTFEGADTEVEIVGLSEVSDAPAPEETGRTFVENALIKARAA CEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH AHETGLPALADDSGLEVDALNRMPGIRSARWSGPHAHDERNLQLLLDQTFDLPDERRHGR HHHCCCCCCCCCCCCEEHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC FVCAMAFVDPDGTEITKVATMEGRIISEARGKNGFGYDPMFVPDAQPGDLTSAEMTPEVK EEEEEEEECCCCCCEEEEEECCCEEEHHHCCCCCCCCCCEECCCCCCCCCCCCCCCHHHH DAISHRGQAVRAIVPAVVAHLEGR HHHHHCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA