| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is ycjY [C]
Identifier: 50843132
GI number: 50843132
Start: 1822215
End: 1824128
Strand: Direct
Name: ycjY [C]
Synonym: PPA1669
Alternate gene names: 50843132
Gene position: 1822215-1824128 (Clockwise)
Preceding gene: 50843130
Following gene: 50843139
Centisome position: 71.17
GC content: 57.47
Gene sequence:
>1914_bases ATGCACTCAGCAACCGGGCTGCGACGATCCCGACCGGTAATACACGTCCTCATCTGTCTGTTGCTCATCCTGGCAGGAGC GGTTGGAGCAAGCCTCATCCAAACCGGAGGCGGCCACATCGCCGTCCAAGGGCTCAAAATCCCTGGCAAAGACGGAGCTG TAGCTAGTGCCGACCTCTTCCGACCCGACACGGCAACAGCAACGCACAAAGCCCCTCTCATCGTCGTGACACCAGGATTC CAGCGCACCAAGGAGACCCAGATCTCCTACTCCCTGGAACTCGCTCGCCGTGGATACGTCACCCTCGTCGTCGATCCGTA CAACCAAGGCGAATCGACCTCTCAGCCTCCCCACAGCGACGACCCCAGCATCCAGCCAGCCATCGATTACGTGTCGCGTA CCAACGCTCTCAACTATGTCGATAAGACCAAGATCGGCATCACCGGCCACTCCGCAGGTGGATCCCAAGTGCGCCACATA GCCGCAGAATACGGCACTAAGGAGGCCAAAGCCCTTAAGAAAGCTAAGGCTCCCGACTCCCCCGGAGGCACAACGGTTAC GAAGGAGGAACGCGAAAAAGCCGAACAACTCAACCCCATCCGCTCTGTCTTCATCTCGGGCTGGTTACAGCAGCTAAACG CCAAGAAGCTCAAAAACATCCGATCCAATATCGGCATCGGCTACGCCCTCTACGACGAAGGCGGCTACCGCAATAAAACC CACAATGGCGATCTGCGTCACGCCCCAGAGGCCATTGCCGTCATCAACTCTGGCCTGCCAAAGTCACAGCACGTCAATCA TGTGGTCGTCGGAAAAGGTTACGGGTCAGCTGCCGATCGAACCTACCGCGTGGCTTATAACGACCGGACGATTCACCCGT TCCAGCCGCTCACACCCAGCGCCATCGGGTCGATGATTCAGTTCTTCGACGACACCATCGGCGCCCCGCACCAGATGAGT ACCTCCAACCAAACGTGGTGGCTTAAAGAACTCTTCAACGGCCTATCCCTCGTCGCAGCGCTGGTCATGCTCGTGCCCCT GACGAAACTGCTTCTGACAATTCCATGGTTCGCAGCGGCTCGTACCGACATCTCCCCCGCCCCACCGAAACCCAAAGGCA AAAGCGCGGTAATATTCTGGACTATCTTCGTCATCTCAGCAGCCGTTGCCTGCGTAACCTTCATCCCCTTATCGGTAGCT AGCCAGCACATCTTTTCGGCCGCAGCCAACAAACAAAACGGCTGGTTCTTTCCCGGACGAATGGTTAACGGGGTCGTGCT GTGGTCGCTCGTTAACGGCCTATTCGGTCTCGTCCTGCTGTGGATCAGCCACGCCATATCGAAGAAACACGGCGACGACG AGGCCAAAGACTGGGGAGTTCGGATGAACTGGGTCCAGACCGGGCGGACCCTCGCCCTAGCCCTGCTCGTCATCGTCATC TTCTACACAATCCTGGCAGCCATCTACGGCTTCTTCCACGTCGACTACCGACTTTTCGTGGTAGCTGCCCGCCCGCTAAC AAAGCGCTGGTTCCTCATTGCACTGGCCTATGTGCCGGCCCTGTTCCTGTTCTTCTTGTCAAACTCGTTGCGGGTCAATA CCTCAATGCGATTCAACAACCAACGTCGCTGGGTCAATTGGCTCATCATTGCCCTGGCCAATTCCATCGGCCTGGCAGCC ATTTTCGTCATCCAGTACGTCACACTCTTCTCGACCGGGACGGTGTTCTGGACGACGACCTGGCTGTACGTCAACATGCT GCAATCCCTGCTACCCATGATGGTGGTATTGCCGCTGTTCAACCGTGCCTTCTACCATGTCACCGGGCGGGTGTGGCTCG GCCCGATCGTCACCACTACGATCTTCGCCCTGATGGCACTAGGTGGATCGGTGGCGTATATCCCCATGTTCTGA
Upstream 100 bases:
>100_bases GAAAAAATACTAACATTGCTCCAGTTGACAACGGTGCCCCTTGTGGCACTGACGTCCCCATGAACTCCATCCCCATGGGA GCCAATGGCAAGGAGCACTG
Downstream 100 bases:
>100_bases TCGGGGCCACAATGCGCCCCGACGGGTCAGCCTCATGGTCCGAGGCGCACGTCACTCGGAGGGGACGTCCTCCTGTGGCG GTTGCCATGCCAACGGAAGA
Product: membrane-spanning protein
Products: NA
Alternate protein names: Conserved Membrane-Spanning Protein
Number of amino acids: Translated: 637; Mature: 637
Protein sequence:
>637_residues MHSATGLRRSRPVIHVLICLLLILAGAVGASLIQTGGGHIAVQGLKIPGKDGAVASADLFRPDTATATHKAPLIVVTPGF QRTKETQISYSLELARRGYVTLVVDPYNQGESTSQPPHSDDPSIQPAIDYVSRTNALNYVDKTKIGITGHSAGGSQVRHI AAEYGTKEAKALKKAKAPDSPGGTTVTKEEREKAEQLNPIRSVFISGWLQQLNAKKLKNIRSNIGIGYALYDEGGYRNKT HNGDLRHAPEAIAVINSGLPKSQHVNHVVVGKGYGSAADRTYRVAYNDRTIHPFQPLTPSAIGSMIQFFDDTIGAPHQMS TSNQTWWLKELFNGLSLVAALVMLVPLTKLLLTIPWFAAARTDISPAPPKPKGKSAVIFWTIFVISAAVACVTFIPLSVA SQHIFSAAANKQNGWFFPGRMVNGVVLWSLVNGLFGLVLLWISHAISKKHGDDEAKDWGVRMNWVQTGRTLALALLVIVI FYTILAAIYGFFHVDYRLFVVAARPLTKRWFLIALAYVPALFLFFLSNSLRVNTSMRFNNQRRWVNWLIIALANSIGLAA IFVIQYVTLFSTGTVFWTTTWLYVNMLQSLLPMMVVLPLFNRAFYHVTGRVWLGPIVTTTIFALMALGGSVAYIPMF
Sequences:
>Translated_637_residues MHSATGLRRSRPVIHVLICLLLILAGAVGASLIQTGGGHIAVQGLKIPGKDGAVASADLFRPDTATATHKAPLIVVTPGF QRTKETQISYSLELARRGYVTLVVDPYNQGESTSQPPHSDDPSIQPAIDYVSRTNALNYVDKTKIGITGHSAGGSQVRHI AAEYGTKEAKALKKAKAPDSPGGTTVTKEEREKAEQLNPIRSVFISGWLQQLNAKKLKNIRSNIGIGYALYDEGGYRNKT HNGDLRHAPEAIAVINSGLPKSQHVNHVVVGKGYGSAADRTYRVAYNDRTIHPFQPLTPSAIGSMIQFFDDTIGAPHQMS TSNQTWWLKELFNGLSLVAALVMLVPLTKLLLTIPWFAAARTDISPAPPKPKGKSAVIFWTIFVISAAVACVTFIPLSVA SQHIFSAAANKQNGWFFPGRMVNGVVLWSLVNGLFGLVLLWISHAISKKHGDDEAKDWGVRMNWVQTGRTLALALLVIVI FYTILAAIYGFFHVDYRLFVVAARPLTKRWFLIALAYVPALFLFFLSNSLRVNTSMRFNNQRRWVNWLIIALANSIGLAA IFVIQYVTLFSTGTVFWTTTWLYVNMLQSLLPMMVVLPLFNRAFYHVTGRVWLGPIVTTTIFALMALGGSVAYIPMF >Mature_637_residues MHSATGLRRSRPVIHVLICLLLILAGAVGASLIQTGGGHIAVQGLKIPGKDGAVASADLFRPDTATATHKAPLIVVTPGF QRTKETQISYSLELARRGYVTLVVDPYNQGESTSQPPHSDDPSIQPAIDYVSRTNALNYVDKTKIGITGHSAGGSQVRHI AAEYGTKEAKALKKAKAPDSPGGTTVTKEEREKAEQLNPIRSVFISGWLQQLNAKKLKNIRSNIGIGYALYDEGGYRNKT HNGDLRHAPEAIAVINSGLPKSQHVNHVVVGKGYGSAADRTYRVAYNDRTIHPFQPLTPSAIGSMIQFFDDTIGAPHQMS TSNQTWWLKELFNGLSLVAALVMLVPLTKLLLTIPWFAAARTDISPAPPKPKGKSAVIFWTIFVISAAVACVTFIPLSVA SQHIFSAAANKQNGWFFPGRMVNGVVLWSLVNGLFGLVLLWISHAISKKHGDDEAKDWGVRMNWVQTGRTLALALLVIVI FYTILAAIYGFFHVDYRLFVVAARPLTKRWFLIALAYVPALFLFFLSNSLRVNTSMRFNNQRRWVNWLIIALANSIGLAA IFVIQYVTLFSTGTVFWTTTWLYVNMLQSLLPMMVVLPLFNRAFYHVTGRVWLGPIVTTTIFALMALGGSVAYIPMF
Specific function: Unknown
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69965; Mature: 69965
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSATGLRRSRPVIHVLICLLLILAGAVGASLIQTGGGHIAVQGLKIPGKDGAVASADLF CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEHHCC RPDTATATHKAPLIVVTPGFQRTKETQISYSLELARRGYVTLVVDPYNQGESTSQPPHSD CCCCCCCCCCCCEEEECCCCCCCCHHHHHEEEEHHHCCEEEEEECCCCCCCCCCCCCCCC DPSIQPAIDYVSRTNALNYVDKTKIGITGHSAGGSQVRHIAAEYGTKEAKALKKAKAPDS CCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHCCCCC PGGTTVTKEEREKAEQLNPIRSVFISGWLQQLNAKKLKNIRSNIGIGYALYDEGGYRNKT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC HNGDLRHAPEAIAVINSGLPKSQHVNHVVVGKGYGSAADRTYRVAYNDRTIHPFQPLTPS CCCCCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCEECCCCCCCHH AIGSMIQFFDDTIGAPHQMSTSNQTWWLKELFNGLSLVAALVMLVPLTKLLLTIPWFAAA HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTDISPAPPKPKGKSAVIFWTIFVISAAVACVTFIPLSVASQHIFSAAANKQNGWFFPGR CCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH MVNGVVLWSLVNGLFGLVLLWISHAISKKHGDDEAKDWGVRMNWVQTGRTLALALLVIVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEHHHCCHHHHHHHHHHHH FYTILAAIYGFFHVDYRLFVVAARPLTKRWFLIALAYVPALFLFFLSNSLRVNTSMRFNN HHHHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECC QRRWVNWLIIALANSIGLAAIFVIQYVTLFSTGTVFWTTTWLYVNMLQSLLPMMVVLPLF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH NRAFYHVTGRVWLGPIVTTTIFALMALGGSVAYIPMF HHHHHEEECCHHHHHHHHHHHHHHHHCCCCEEEEECC >Mature Secondary Structure MHSATGLRRSRPVIHVLICLLLILAGAVGASLIQTGGGHIAVQGLKIPGKDGAVASADLF CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEHHCC RPDTATATHKAPLIVVTPGFQRTKETQISYSLELARRGYVTLVVDPYNQGESTSQPPHSD CCCCCCCCCCCCEEEECCCCCCCCHHHHHEEEEHHHCCEEEEEECCCCCCCCCCCCCCCC DPSIQPAIDYVSRTNALNYVDKTKIGITGHSAGGSQVRHIAAEYGTKEAKALKKAKAPDS CCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHCCCCC PGGTTVTKEEREKAEQLNPIRSVFISGWLQQLNAKKLKNIRSNIGIGYALYDEGGYRNKT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCC HNGDLRHAPEAIAVINSGLPKSQHVNHVVVGKGYGSAADRTYRVAYNDRTIHPFQPLTPS CCCCCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCEECCCCCCCHH AIGSMIQFFDDTIGAPHQMSTSNQTWWLKELFNGLSLVAALVMLVPLTKLLLTIPWFAAA HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTDISPAPPKPKGKSAVIFWTIFVISAAVACVTFIPLSVASQHIFSAAANKQNGWFFPGR CCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH MVNGVVLWSLVNGLFGLVLLWISHAISKKHGDDEAKDWGVRMNWVQTGRTLALALLVIVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEHHHCCHHHHHHHHHHHH FYTILAAIYGFFHVDYRLFVVAARPLTKRWFLIALAYVPALFLFFLSNSLRVNTSMRFNN HHHHHHHHHHHHHHCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECC QRRWVNWLIIALANSIGLAAIFVIQYVTLFSTGTVFWTTTWLYVNMLQSLLPMMVVLPLF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH NRAFYHVTGRVWLGPIVTTTIFALMALGGSVAYIPMF HHHHHEEECCHHHHHHHHHHHHHHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA