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The map label for this gene is cobQ [H]

Identifier: 50843120

GI number: 50843120

Start: 1809361

End: 1810089

Strand: Direct

Name: cobQ [H]

Synonym: PPA1654

Alternate gene names: 50843120

Gene position: 1809361-1810089 (Clockwise)

Preceding gene: 50843119

Following gene: 50843121

Centisome position: 70.67

GC content: 61.04

Gene sequence:

>729_bases
ATGAACATCGACCGTCCCAAGATCGTCCTGCTGTACCAGTCCCTGTTGGGCATCTACGGCGACCACGGCAATGCCGTCGT
CCTCACTAAACGACTGCAATGGCGTGGCATCGACGCCGAGCTCCTCATCGTCGAGCCTGGTCAGCCTGTGCCCACCGACG
GGGCCGTTTACCTGCTAGGGGGCGGAGAGGACACCGCCCAGATCACCGCTGTACAAGAGCTCGAAGCTGATGGCGGGCTG
TTCACCGCCCTCGACGACGGCGCAATGCTTTTTGCAGTGTGCGCCGGCTACCAGATCTGCGGAAAGTCCTTCACCATTGG
GGCCCGTGATGAGGCCATCAAAGGGCTAGGGCTCCTCGACGCTGAAACTCGACGTGGCCCAGAGCGTGCCGTCGGGGAGG
TGCTACACATCTGGACTCAGCCCGACGGTAATACCTATCCCATCACCGGTTTCGAAAATCATGGCGGCTGGACCGAACTC
GGTTCCGACGCCAAACCGCTTGCTGCCGTAGAGAGTGGCTGGGGCAATGGCAACCGTCGTGACGAAGGGGCTGTGCAGGG
TCGGGTCATCGGCACATATCCCCACGGACCAGTACTGGTACGCAACCCGCAGCTAGCCGACCACGTGCTTGAAATGGCTC
TAGGAAGCCGTTTAGAACCCCTCGATATACCGGAGATAACGGCGCTGCGACAGCGTCGGATTGAGGCTGTGCGCACCGAT
CGGTCATGA

Upstream 100 bases:

>100_bases
CCCCCCCACTCCTGGCCGGAAAGTGGGACGCCGAACACCCTATTGACGTGCTGTCAACCTATACACCTTTCCAGAAACTG
CGCCGACTCGGAGGACTGGC

Downstream 100 bases:

>100_bases
GCTTGTCACCTCGATTTTGCATCATGACCGGAGTCCGCTAGTGTTGCTTGTTGTCGGCGCTGCTAGCTCAATTGGCAGAG
CAGCTGACTCTTAATCAGCG

Product: putative cobyric acid synthase CobQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MNIDRPKIVLLYQSLLGIYGDHGNAVVLTKRLQWRGIDAELLIVEPGQPVPTDGAVYLLGGGEDTAQITAVQELEADGGL
FTALDDGAMLFAVCAGYQICGKSFTIGARDEAIKGLGLLDAETRRGPERAVGEVLHIWTQPDGNTYPITGFENHGGWTEL
GSDAKPLAAVESGWGNGNRRDEGAVQGRVIGTYPHGPVLVRNPQLADHVLEMALGSRLEPLDIPEITALRQRRIEAVRTD
RS

Sequences:

>Translated_242_residues
MNIDRPKIVLLYQSLLGIYGDHGNAVVLTKRLQWRGIDAELLIVEPGQPVPTDGAVYLLGGGEDTAQITAVQELEADGGL
FTALDDGAMLFAVCAGYQICGKSFTIGARDEAIKGLGLLDAETRRGPERAVGEVLHIWTQPDGNTYPITGFENHGGWTEL
GSDAKPLAAVESGWGNGNRRDEGAVQGRVIGTYPHGPVLVRNPQLADHVLEMALGSRLEPLDIPEITALRQRRIEAVRTD
RS
>Mature_242_residues
MNIDRPKIVLLYQSLLGIYGDHGNAVVLTKRLQWRGIDAELLIVEPGQPVPTDGAVYLLGGGEDTAQITAVQELEADGGL
FTALDDGAMLFAVCAGYQICGKSFTIGARDEAIKGLGLLDAETRRGPERAVGEVLHIWTQPDGNTYPITGFENHGGWTEL
GSDAKPLAAVESGWGNGNRRDEGAVQGRVIGTYPHGPVLVRNPQLADHVLEMALGSRLEPLDIPEITALRQRRIEAVRTD
RS

Specific function: Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation [H]

COG id: COG3442

COG function: function code R; Predicted glutamine amidotransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GATase cobBQ-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR017929
- InterPro:   IPR004459
- InterPro:   IPR011698 [H]

Pfam domain/function: PF01656 CbiA; PF07685 GATase_3 [H]

EC number: NA

Molecular weight: Translated: 26057; Mature: 26057

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIDRPKIVLLYQSLLGIYGDHGNAVVLTKRLQWRGIDAELLIVEPGQPVPTDGAVYLLG
CCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCEEEEEECCCCCCCCCCEEEEEE
GGEDTAQITAVQELEADGGLFTALDDGAMLFAVCAGYQICGKSFTIGARDEAIKGLGLLD
CCCCCEEEEEEEECCCCCCEEEEECCCHHEEHHHHCHHHCCCEEEECCCHHHHHCCCCCC
AETRRGPERAVGEVLHIWTQPDGNTYPITGFENHGGWTELGSDAKPLAAVESGWGNGNRR
CHHCCCHHHHHHHEEEEEECCCCCEEECCCCCCCCCHHHCCCCCCCHHHHHCCCCCCCCC
DEGAVQGRVIGTYPHGPVLVRNPQLADHVLEMALGSRLEPLDIPEITALRQRRIEAVRTD
CCCCCCCEEEEECCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC
RS
CC
>Mature Secondary Structure
MNIDRPKIVLLYQSLLGIYGDHGNAVVLTKRLQWRGIDAELLIVEPGQPVPTDGAVYLLG
CCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCEEEEEECCCCCCCCCCEEEEEE
GGEDTAQITAVQELEADGGLFTALDDGAMLFAVCAGYQICGKSFTIGARDEAIKGLGLLD
CCCCCEEEEEEEECCCCCCEEEEECCCHHEEHHHHCHHHCCCEEEECCCHHHHHCCCCCC
AETRRGPERAVGEVLHIWTQPDGNTYPITGFENHGGWTELGSDAKPLAAVESGWGNGNRR
CHHCCCHHHHHHHEEEEEECCCCCEEECCCCCCCCCHHHCCCCCCCHHHHHCCCCCCCCC
DEGAVQGRVIGTYPHGPVLVRNPQLADHVLEMALGSRLEPLDIPEITALRQRRIEAVRTD
CCCCCCCEEEEECCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC
RS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA