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The map label for this gene is ssb [H]

Identifier: 50843105

GI number: 50843105

Start: 1782097

End: 1782558

Strand: Reverse

Name: ssb [H]

Synonym: PPA1637

Alternate gene names: 50843105

Gene position: 1782558-1782097 (Counterclockwise)

Preceding gene: 50843106

Following gene: 50843104

Centisome position: 69.62

GC content: 60.17

Gene sequence:

>462_bases
ATGGACGCAAACGTGTCATTTACCGGGAACCTCGGAACCGACGTCGAGATGAAAATCGGAGAGGGTTGGCGGGGAGCCAG
ATTCCGGGTTGCCCACACCCCTCGCGTCATGAGGCAGGGGGAGTGGGTCGATGGGACGACGACCTGGATGTCGGTGCACG
TCTATGGCCGACTCGCTGACAATTGTCACGTTTCCCTGCGTAAGGGGGACCCGGTGATGGTAACCGGGCGACTTCGTACC
CGCAGCTGGATCGATGATGAGGGCTCCCACGAGCAACTCATTGTCGTTGCACATAATGTTGGACCGGACCTATCCCGGTT
GCCTGCCACGTGTCGTCGACCCGAGAAACGCGCCGAAGCTCCCCTGGGCGATGATCGGGTAGTGCGTTACCACGATTCTC
CGGATGGGGTCGATGAGGATGCCGAGGTGGTTGACGACGATGTCGAGATGGTTGGCTCCTGA

Upstream 100 bases:

>100_bases
GCTGAACGGTGTCGCCTGGAGGTTATCCACAGTTGGGATATTGTTTGGCGGATTTCGGGAGTTGCGCCGATAACCGTATG
TGAGTGAAAGGAGCTCACAG

Downstream 100 bases:

>100_bases
GGTCGATCAGGGCCGATGTGGGAATGAGTTGGTGACGGGAGTCGTTACAACGACTGGCATACTGTGCAGCGGTCGGTGAA
GTGCCGGCCGCCCCGTTCCC

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MDANVSFTGNLGTDVEMKIGEGWRGARFRVAHTPRVMRQGEWVDGTTTWMSVHVYGRLADNCHVSLRKGDPVMVTGRLRT
RSWIDDEGSHEQLIVVAHNVGPDLSRLPATCRRPEKRAEAPLGDDRVVRYHDSPDGVDEDAEVVDDDVEMVGS

Sequences:

>Translated_153_residues
MDANVSFTGNLGTDVEMKIGEGWRGARFRVAHTPRVMRQGEWVDGTTTWMSVHVYGRLADNCHVSLRKGDPVMVTGRLRT
RSWIDDEGSHEQLIVVAHNVGPDLSRLPATCRRPEKRAEAPLGDDRVVRYHDSPDGVDEDAEVVDDDVEMVGS
>Mature_153_residues
MDANVSFTGNLGTDVEMKIGEGWRGARFRVAHTPRVMRQGEWVDGTTTWMSVHVYGRLADNCHVSLRKGDPVMVTGRLRT
RSWIDDEGSHEQLIVVAHNVGPDLSRLPATCRRPEKRAEAPLGDDRVVRYHDSPDGVDEDAEVVDDDVEMVGS

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

None

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 17053; Mature: 17053

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDANVSFTGNLGTDVEMKIGEGWRGARFRVAHTPRVMRQGEWVDGTTTWMSVHVYGRLAD
CCCCEEEECCCCCCEEEEECCCCCCCEEEEECCCHHHHCCCCCCCCEEEEEEEEEEEECC
NCHVSLRKGDPVMVTGRLRTRSWIDDEGSHEQLIVVAHNVGPDLSRLPATCRRPEKRAEA
CEEEEEECCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCHHHCCHHHCCCHHHCCC
PLGDDRVVRYHDSPDGVDEDAEVVDDDVEMVGS
CCCCCCEEEEECCCCCCCCCHHHHCCCHHCCCC
>Mature Secondary Structure
MDANVSFTGNLGTDVEMKIGEGWRGARFRVAHTPRVMRQGEWVDGTTTWMSVHVYGRLAD
CCCCEEEECCCCCCEEEEECCCCCCCEEEEECCCHHHHCCCCCCCCEEEEEEEEEEEECC
NCHVSLRKGDPVMVTGRLRTRSWIDDEGSHEQLIVVAHNVGPDLSRLPATCRRPEKRAEA
CEEEEEECCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCHHHCCHHHCCCHHHCCC
PLGDDRVVRYHDSPDGVDEDAEVVDDDVEMVGS
CCCCCCEEEEECCCCCCCCCHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12948626 [H]