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The map label for this gene is 50843084

Identifier: 50843084

GI number: 50843084

Start: 1750462

End: 1752717

Strand: Direct

Name: 50843084

Synonym: PPA1616

Alternate gene names: NA

Gene position: 1750462-1752717 (Clockwise)

Preceding gene: 50843083

Following gene: 50843093

Centisome position: 68.37

GC content: 63.65

Gene sequence:

>2256_bases
ATGGCTGAGTCGACGATCATCATGTCGAAGCAGGCGCTGAAGCTCGACGGATCCCTCAAGCCCAAGGCGTTTACCTTCCT
CGAGAAACTCACCACTGATGACACGGCGCCCGGCTTGCACATCGAACCGGTAAAGAAGTGCCGCGACAGCAGGGTGCGGA
CCGGTCGTGTCGACCAGCAATATCGCGCCGTATTGTTCAAGCTCACCGGCGAGGACGGCAACCGCCGCTACGTCCTCGAA
GGCTTTTACAACCACGACGAGGCTTACGACGTCGCCCCACGCGTTGAACTCGCCATCAACCCTTTCAACGGAATTCCCGA
GATCAAGCGAGCCGAACCGTCCATCGACACCCCCAACCCGACCGCCAGCGCCCCTACCGCGCGCAAACCGGCCGCCCCCG
TGCAGGAGACCGCCACTCCAGTCATCACCGCCGACCGAGCAGACATGCTGTCTCTCGGCCTTGACGCCAACCTCGTCGAT
ACCGCGCTCGCCCTGACCAGTGAAGACGCCGTACTCAACATGGCAGCGTCGCTCAGCGGGTGGCAGGAGGCAGCACTTGT
CGGCCTGGCCTCCGGGATGACGCCAGAGCAGGTGCGCCAAGAACTGCTCGAATCCCCCGAGGAGTTGCCCGAACCATCCA
AGAAGCAGCATGGCCACGCTGCGAGCCCTCGCGAACCCGACGTCGAGCTACTCGAGAGCCTACGCAGCCCCGCAGCAGCC
ATGGAGTTCGCCACAATCGAAGGGGTCGACGAGCTGCGAAGAGTCATCGAGGATGGAGACTTCGGCGCCTGGCGGGTGTT
CCTGCACCCGACGCAGCGCCGCTTCGTCAACGGTAGGTGGAACGGGCCGTTCTGTCTGGGCGGAGGAGCCGGAACCGGAA
AGACCGTCGTCATCCTTCACCGGGCGGTGTCTCTGGCACGGGAGAATCCGGGAGCCCGGATCATTATCACGACGTTCACA
AAGAACCTCGCCCATGAGCTGTCCGCGAGTCTGGAGTCGCTCGACCCCGCCCTACCACGGGCGTCCGCGCTGGGACAGCC
AGGTGTGTACGTCATCGGTATTGATGCCTTGGCCAACGCTGTTGTCCGGGAGGCCGGAGCCGATGTCGCCGAAGCCGCCG
AAGGCGTCCTGGGAGCCCCACGCACCGATTTGTCCCGGCGCACCTCCCAGTGGCTTTGGCGCGATGTCCTCGACCACGCC
GGACCAGAGGTACCCGAGCGGCTAGCTCACCACCGCCTACTCGAAACCGAGTACGAGCAAGTCATCCTGCCGCAAAACAT
CACGACGCGAGAGGAGTATCTGCGAGCACGCCGCCCAGGGCGAGGGTTCCGGCTCAATCGCCGCGATCGTGATGCCGTGT
GGACGCTTGTCAAAAAGTACCGAGACGACTCTCGCATCAGCGGCACGATCTCGTTCCCCGAGGCAGCCGCCATCGCCGCG
CAATACCTCACCCGCCACAGTCCCCTCGCCGACCATGTTCTCGTGGACGAGGGCCAAGACCTCACGCCGGCCCACTGGAG
GCTCATTCGGTCGCTGGTCCCCGAGGGACCAAACGACATTTTCATCGCCGAGGACTCACACCAGCGCATCTACGGTCACC
GGTTGGTCCTATCTCGGTACGGCATCATGACGAGGGGCCGTTCGCGGCGGCTCACCCTCAACTACCGCACCACTGCGCAG
ATCCTCAGGTGGTCGACCCACGTGCTAGAGGGCGGATTTTACGTCGACCTCGACGGCGATGACGATGACAAGCTGTCGGG
GTACCGGTCGGCCCGTCGCGGCCCCGACGTCATCGCCCACCCGTGCACGACGATCACCGAAGAGTTCGACTACTTGGCCA
AGGTTGTCGGGCAATGGGCGAAGGACCGTCAGTCCGAGACCACGGCGGTGCTCGTGAGGGACAGGTCGCAGCGCGAGCGA
GTAGTGGATGCGCTCCACGAGCGAGGAGTACAAACCCGAGCCGTCGGTCATGGCTCGATACCGCCCGGGGCGCCAGTGGT
TATGACCATGCACCGCGCCAAGGGCATCGAGTTCAGCAAAGTGTTCCTCTTCGGGGTCTCCTCGCGGTCTATCCCCATGG
GCATCAAAGATTACGACTTCGATAAAGACGAAGGGGATCAGGCCCTGCTCCGGGAGCGATCGCTGCTGTACGTGGCGGCA
TCGCGGGCCCGCGATGAGCTTGTCGTAAGTTGGACCGACCAGCCCAGCCCATTGTTGAGCGCTTCTGTATCGTCCGTGGC
AGCCAGCACATCTTGA

Upstream 100 bases:

>100_bases
CACGAAGACTTGCTGGCCGAGGACGGATGGACACTGGTGCCGCCGACAGCACACGACATCACGATGGCGTTAGCCAACAC
GACCGAAGGGGAAGGACACC

Downstream 100 bases:

>100_bases
GGGCGACACCCGAGGCCTTGAATGTCGGCTAACGGCTGTTCGGAATCACCACCTCGGTGACGTGAGAAAGTAACGTCCTC
CCATTGTCATGGGCTGACGT

Product: UvrD/Rep helicase

Products: NA

Alternate protein names: DNA Helicase; Helicase; UvrD/Rep Helicase; LexA Repressor; NERD Domain-Containing Protein; DNA Helicase II; Superfamily I DNA/RNA Helicase; Plasmid Stabilization System; Superfamily I DNA And RNA Helicase; Superfamily Protein I DNA/RNA Helicase; UvrD/REP Type DNA Helicase; UvrD/REP Family ATP-Dependent DNA Helicase; ATP-Dependent DNA Helicase; NA Helicase.; DNA/RNA Helicase Superfamily I; Peptidase; Superfamily I DNA/RNA Helicase-Like Protein; Uvrd/Rep Helicase; UvrD/REP Helicase Domain Protein; NERD Domain Protein

Number of amino acids: Translated: 751; Mature: 750

Protein sequence:

>751_residues
MAESTIIMSKQALKLDGSLKPKAFTFLEKLTTDDTAPGLHIEPVKKCRDSRVRTGRVDQQYRAVLFKLTGEDGNRRYVLE
GFYNHDEAYDVAPRVELAINPFNGIPEIKRAEPSIDTPNPTASAPTARKPAAPVQETATPVITADRADMLSLGLDANLVD
TALALTSEDAVLNMAASLSGWQEAALVGLASGMTPEQVRQELLESPEELPEPSKKQHGHAASPREPDVELLESLRSPAAA
MEFATIEGVDELRRVIEDGDFGAWRVFLHPTQRRFVNGRWNGPFCLGGGAGTGKTVVILHRAVSLARENPGARIIITTFT
KNLAHELSASLESLDPALPRASALGQPGVYVIGIDALANAVVREAGADVAEAAEGVLGAPRTDLSRRTSQWLWRDVLDHA
GPEVPERLAHHRLLETEYEQVILPQNITTREEYLRARRPGRGFRLNRRDRDAVWTLVKKYRDDSRISGTISFPEAAAIAA
QYLTRHSPLADHVLVDEGQDLTPAHWRLIRSLVPEGPNDIFIAEDSHQRIYGHRLVLSRYGIMTRGRSRRLTLNYRTTAQ
ILRWSTHVLEGGFYVDLDGDDDDKLSGYRSARRGPDVIAHPCTTITEEFDYLAKVVGQWAKDRQSETTAVLVRDRSQRER
VVDALHERGVQTRAVGHGSIPPGAPVVMTMHRAKGIEFSKVFLFGVSSRSIPMGIKDYDFDKDEGDQALLRERSLLYVAA
SRARDELVVSWTDQPSPLLSASVSSVAASTS

Sequences:

>Translated_751_residues
MAESTIIMSKQALKLDGSLKPKAFTFLEKLTTDDTAPGLHIEPVKKCRDSRVRTGRVDQQYRAVLFKLTGEDGNRRYVLE
GFYNHDEAYDVAPRVELAINPFNGIPEIKRAEPSIDTPNPTASAPTARKPAAPVQETATPVITADRADMLSLGLDANLVD
TALALTSEDAVLNMAASLSGWQEAALVGLASGMTPEQVRQELLESPEELPEPSKKQHGHAASPREPDVELLESLRSPAAA
MEFATIEGVDELRRVIEDGDFGAWRVFLHPTQRRFVNGRWNGPFCLGGGAGTGKTVVILHRAVSLARENPGARIIITTFT
KNLAHELSASLESLDPALPRASALGQPGVYVIGIDALANAVVREAGADVAEAAEGVLGAPRTDLSRRTSQWLWRDVLDHA
GPEVPERLAHHRLLETEYEQVILPQNITTREEYLRARRPGRGFRLNRRDRDAVWTLVKKYRDDSRISGTISFPEAAAIAA
QYLTRHSPLADHVLVDEGQDLTPAHWRLIRSLVPEGPNDIFIAEDSHQRIYGHRLVLSRYGIMTRGRSRRLTLNYRTTAQ
ILRWSTHVLEGGFYVDLDGDDDDKLSGYRSARRGPDVIAHPCTTITEEFDYLAKVVGQWAKDRQSETTAVLVRDRSQRER
VVDALHERGVQTRAVGHGSIPPGAPVVMTMHRAKGIEFSKVFLFGVSSRSIPMGIKDYDFDKDEGDQALLRERSLLYVAA
SRARDELVVSWTDQPSPLLSASVSSVAASTS
>Mature_750_residues
AESTIIMSKQALKLDGSLKPKAFTFLEKLTTDDTAPGLHIEPVKKCRDSRVRTGRVDQQYRAVLFKLTGEDGNRRYVLEG
FYNHDEAYDVAPRVELAINPFNGIPEIKRAEPSIDTPNPTASAPTARKPAAPVQETATPVITADRADMLSLGLDANLVDT
ALALTSEDAVLNMAASLSGWQEAALVGLASGMTPEQVRQELLESPEELPEPSKKQHGHAASPREPDVELLESLRSPAAAM
EFATIEGVDELRRVIEDGDFGAWRVFLHPTQRRFVNGRWNGPFCLGGGAGTGKTVVILHRAVSLARENPGARIIITTFTK
NLAHELSASLESLDPALPRASALGQPGVYVIGIDALANAVVREAGADVAEAAEGVLGAPRTDLSRRTSQWLWRDVLDHAG
PEVPERLAHHRLLETEYEQVILPQNITTREEYLRARRPGRGFRLNRRDRDAVWTLVKKYRDDSRISGTISFPEAAAIAAQ
YLTRHSPLADHVLVDEGQDLTPAHWRLIRSLVPEGPNDIFIAEDSHQRIYGHRLVLSRYGIMTRGRSRRLTLNYRTTAQI
LRWSTHVLEGGFYVDLDGDDDDKLSGYRSARRGPDVIAHPCTTITEEFDYLAKVVGQWAKDRQSETTAVLVRDRSQRERV
VDALHERGVQTRAVGHGSIPPGAPVVMTMHRAKGIEFSKVFLFGVSSRSIPMGIKDYDFDKDEGDQALLRERSLLYVAAS
RARDELVVSWTDQPSPLLSASVSSVAASTS

Specific function: Unknown

COG id: COG0210

COG function: function code L; Superfamily I DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82877; Mature: 82746

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAESTIIMSKQALKLDGSLKPKAFTFLEKLTTDDTAPGLHIEPVKKCRDSRVRTGRVDQQ
CCCCEEEECCHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCHH
YRAVLFKLTGEDGNRRYVLEGFYNHDEAYDVAPRVELAINPFNGIPEIKRAEPSIDTPNP
EEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCHHHCCCCCCCCCC
TASAPTARKPAAPVQETATPVITADRADMLSLGLDANLVDTALALTSEDAVLNMAASLSG
CCCCCCCCCCCCCHHHCCCCEEECCCHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHCC
WQEAALVGLASGMTPEQVRQELLESPEELPEPSKKQHGHAASPREPDVELLESLRSPAAA
HHHHHHHHHHCCCCHHHHHHHHHCCHHHCCCCCHHCCCCCCCCCCCCHHHHHHHCCCHHH
MEFATIEGVDELRRVIEDGDFGAWRVFLHPTQRRFVNGRWNGPFCLGGGAGTGKTVVILH
HHHHHHCCHHHHHHHHHCCCCCEEEEEECCCHHHHCCCCCCCCEEECCCCCCCCEEEEHH
RAVSLARENPGARIIITTFTKNLAHELSASLESLDPALPRASALGQPGVYVIGIDALANA
HHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCEEEEEHHHHHHH
VVREAGADVAEAAEGVLGAPRTDLSRRTSQWLWRDVLDHAGPEVPERLAHHRLLETEYEQ
HHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
VILPQNITTREEYLRARRPGRGFRLNRRDRDAVWTLVKKYRDDSRISGTISFPEAAAIAA
EECCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHH
QYLTRHSPLADHVLVDEGQDLTPAHWRLIRSLVPEGPNDIFIAEDSHQRIYGHRLVLSRY
HHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHH
GIMTRGRSRRLTLNYRTTAQILRWSTHVLEGGFYVDLDGDDDDKLSGYRSARRGPDVIAH
CHHCCCCCCEEEEEEHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCEEC
PCTTITEEFDYLAKVVGQWAKDRQSETTAVLVRDRSQRERVVDALHERGVQTRAVGHGSI
CHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEECCCCCC
PPGAPVVMTMHRAKGIEFSKVFLFGVSSRSIPMGIKDYDFDKDEGDQALLRERSLLYVAA
CCCCCEEEEEHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEEC
SRARDELVVSWTDQPSPLLSASVSSVAASTS
CCCCCCEEEEECCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AESTIIMSKQALKLDGSLKPKAFTFLEKLTTDDTAPGLHIEPVKKCRDSRVRTGRVDQQ
CCCEEEECCHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCHH
YRAVLFKLTGEDGNRRYVLEGFYNHDEAYDVAPRVELAINPFNGIPEIKRAEPSIDTPNP
EEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCHHHCCCCCCCCCC
TASAPTARKPAAPVQETATPVITADRADMLSLGLDANLVDTALALTSEDAVLNMAASLSG
CCCCCCCCCCCCCHHHCCCCEEECCCHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHCC
WQEAALVGLASGMTPEQVRQELLESPEELPEPSKKQHGHAASPREPDVELLESLRSPAAA
HHHHHHHHHHCCCCHHHHHHHHHCCHHHCCCCCHHCCCCCCCCCCCCHHHHHHHCCCHHH
MEFATIEGVDELRRVIEDGDFGAWRVFLHPTQRRFVNGRWNGPFCLGGGAGTGKTVVILH
HHHHHHCCHHHHHHHHHCCCCCEEEEEECCCHHHHCCCCCCCCEEECCCCCCCCEEEEHH
RAVSLARENPGARIIITTFTKNLAHELSASLESLDPALPRASALGQPGVYVIGIDALANA
HHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCEEEEEHHHHHHH
VVREAGADVAEAAEGVLGAPRTDLSRRTSQWLWRDVLDHAGPEVPERLAHHRLLETEYEQ
HHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
VILPQNITTREEYLRARRPGRGFRLNRRDRDAVWTLVKKYRDDSRISGTISFPEAAAIAA
EECCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHH
QYLTRHSPLADHVLVDEGQDLTPAHWRLIRSLVPEGPNDIFIAEDSHQRIYGHRLVLSRY
HHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHH
GIMTRGRSRRLTLNYRTTAQILRWSTHVLEGGFYVDLDGDDDDKLSGYRSARRGPDVIAH
CHHCCCCCCEEEEEEHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCEEC
PCTTITEEFDYLAKVVGQWAKDRQSETTAVLVRDRSQRERVVDALHERGVQTRAVGHGSI
CHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEECCCCCC
PPGAPVVMTMHRAKGIEFSKVFLFGVSSRSIPMGIKDYDFDKDEGDQALLRERSLLYVAA
CCCCCEEEEEHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEEC
SRARDELVVSWTDQPSPLLSASVSSVAASTS
CCCCCCEEEEECCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA