| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50843082
Identifier: 50843082
GI number: 50843082
Start: 1741330
End: 1744119
Strand: Direct
Name: 50843082
Synonym: PPA1614
Alternate gene names: NA
Gene position: 1741330-1744119 (Clockwise)
Preceding gene: 50843080
Following gene: 50843083
Centisome position: 68.01
GC content: 66.31
Gene sequence:
>2790_bases ATGGGGTCGACCTTAACGCGACCGCGGTGGAGTTCGCCGAAATCATCCTGTGGCTCGACACCATGGCCAGCGGCCTCGAC GCCCCCTGGTTCGGCCTGCACCTGCGCCGTGGAAACTCCCTCATTGGGACACGCCACGCCGTGTATACCCGCGACCAGCT CACCTCGAAGGCCTGGCCTGACCACCCCGCCAACTGATGTCCCTCTCACCGACCTGGCCACCCGACTGGACGACGACGCA GCGGACCCGACGCAGGCCGACGGCCGCATCCCGCACTTCCTCGTGCCCGCCGCCGGCTGGGGGTCGAGCGCCGACTCCAA GGAGGCCAAGACGCTGGTGCCGCAGCGTGTCAAAGACGTCAAGGACTGGCGCAAGCGGTTCCGACGCCGCCCCGGCCGCC ACGACGTCACCACCCTCGTGGAACTCGGCCACCAGGTCGAGGACCTGTGGACGATGGCACTGCGTCGGCTCACCGTGGCC GAGCAGCAGACGAGCCGCGACATCGCCCTGTGGGGTCGCGACGAAGCCCCCTCGCATCGACAGGTCGTCACCCGGGAACA GGTGGAACAGTCCCTGGCCGACCCCGACGGCGCCTACCAGCGGCTACGGCTCGTCATGGACGCCTGGTGCGCCCTGTGGT TCTGGCCACTGACCACCCGAGTGGCCCCGCCGAGCTGGGCCGAGTGGATCGACGCCTGCACAATGCTGCTGGGCGGGCGT CTTAGCCGGGCCGATCGACGCCGCGACGCCCCCATGCTCGGGTCCGCCCAGATCTGGGAGGCGCTGGCCGCCCAGGAGGA CCTGGCCCTCGCCAGTGCCGGCGCCGCGACCGTCGCGCAGACCCTCGACAAGCACCCGTGGCTGCAGGTGTGCCGCCAGG TCGCCCGGGAGCAGGGGTTCTTCCACTGGCAACTCGACTTTGCACCGGTCTTCGCCCGGGGCGGCTTCGACCTGCAGGTC GGGAATCCGCCGTGGGTGCGGCCCATCCTCGACATGGATGCCCTGCTCGCCGAGGGCGACCCGTGGTGGCAGTTGGCAGG GAAGTCTCCCGAGGACGTTCGCGAGCAGCGCCGCACGGTCACCCTCGCCCTGCCCGGTCTCGCCGACTCGGTGTGCCGAG GTATCACCGATGTATCCGGGACAGGCTCATTCGTCGGGCACGCCACGAACTATCCCATGCTCCAGGGCCTGCAACCCGAC CTCTACCGGTGCTTCATGTGCCAGACATGGGCGCACACATCTTCACGGGGCACCATCGGGCTCGTACACCCCGAGACCCA CTTCACCGACGAGAAGGCCGGGCACCTGCGCGAAGAGACCTACCCGCGGCTGCGTCGGCACTGGCAGTTCGTCAATGAAC TCAAGCTCTTCGACGAGGTGCATGATCTGGTCACCTACGGGGTCCACGTCTACGGCTCGCCCGCGCAACCGCACTTCCTT CAGGCAAGCGCCCTCTACCATCCCGACACGGTCGTGGGCTCGCTGCGCCACGACGGGTCGGGTGGGGCACCCGGATTCAA GGTCGACGGGCACTGGGATCAGCGTCCGCACGCACAGCGCATCGAGACGGTCACCGACGAGACCCTCGCGACGTGGCGAG ACATCCTCGATCCCAACCTTGAGGCGCCGCGGCGGACGCGGATGCTCTACACGGTCAACCGGGACGTGGCGGAGACCCTC CAACAATTGTCCAAAGCACCCCGGCTTGGGTCCCTCAGCCTCCGGTTCTCTCCCGGATGGCACGAAAAGAACGACCGCAC CAAGGGCTACTTCATCCAGCAGTGGGGAACCCCCGATTCCTGGAACGACGTCATCCTCCAAGGCCCGCACCTTCACGTGG CGACGCCCTTCTACAAGTCGCCAAACCCGACCATGAAGCACAACCAGGACTGGTCTGTGGTCGACCTGGAGACGCTTCCT CCCGACGCCATTCCTGTCACCTCGTACAAACCGGCGGGAGACCGTGCCTGGTATGACGCCGACTACACCCATTGGGACGG CGACCCGGCCCGTGACCACTACCGTCTGGCGTGGCGCGCGATGGCAGCCAACACTGGTGAGCGCACCCTCATCCCAGCCA TCATTCCGCCTGGCACAGCACACCCTAATGGAGTGTTCTGCGTGGGAGGTGCTGACAATCGGATTCTCACCGCTTGCGCA GGGTTCGCATCAAGTCTTCTCCTCGACTTCTCTGTTCGTGCCGCCCCCAAGAGCGGCATCTACCAAGCTGTGTTCGACCG GCTTCCTGCACCTTGCCAACGCCATCCACTGCTGCCAGCACTTCTCCTGCGCACCCTCCGCCTCAACTGCCTTACCGACG CCTACGCCGATTTGTGGGCCGAGTGCTTCGACCCCAGCTTCACGTCGGACTCATGGACCATCCCCGACCGTGCCACGACT CCCTTGGGGGATGTCGGCCCCACATGGACGTCGCAGACCCCGCTGCGTAGGGCTGTCGACCGGCGTCAGGCCCTCGTCGA GATCGACGCCCTCGTGGCTCTCATGCTTGGCATCACCGCCGACCAGTTGTGCACCGTGTACCGCACCCAGTTCGCAGTCC TGTACGGCTACGACCATGACCAGTACTTCTACGACGCCCACGGGCGCCTCGTCCCGAACCAGGTGCTCAAGGTGCGGCGG AAAAAAGGCGAGGCCATCACCGAGGCCGAGCGCACTGCCACCACCTACCGCTACGACCTACCCTTCCACACCTATGACCG CGAACTCGATATGCACATCGCCTACGTTGAGTTCGAGCGTCGACTGGAGACCCGAGGAACCGATTCATGA
Upstream 100 bases:
>100_bases CCCACCCGTCGGCAGGCCGAACTGGGCCGACGCATCGACCCGGAGGACTATCCGGCCCAGCTTCAGCCCACCAAGGCGTA CATCGCTCTACACAACGTTT
Downstream 100 bases:
>100_bases GTGAACTCGTCCCCCCGAAGCAGGCGGCCAAGCTCCAGAACGCCCTACTGGACTACCTCACGACAACCTTTGCCCTGTCC GACGCCGATGCCCAACGCGC
Product: putative restriction enzyme
Products: NA
Alternate protein names: Restriction; N6 Adenine-Specific DNA Methyltransferase; Type II Restriction Methylase Subunits; Plasmid-Related Protein
Number of amino acids: Translated: 929; Mature: 928
Protein sequence:
>929_residues MGSTLTRPRWSSPKSSCGSTPWPAASTPPGSACTCAVETPSLGHATPCIPATSSPRRPGLTTPPTDVPLTDLATRLDDDA ADPTQADGRIPHFLVPAAGWGSSADSKEAKTLVPQRVKDVKDWRKRFRRRPGRHDVTTLVELGHQVEDLWTMALRRLTVA EQQTSRDIALWGRDEAPSHRQVVTREQVEQSLADPDGAYQRLRLVMDAWCALWFWPLTTRVAPPSWAEWIDACTMLLGGR LSRADRRRDAPMLGSAQIWEALAAQEDLALASAGAATVAQTLDKHPWLQVCRQVAREQGFFHWQLDFAPVFARGGFDLQV GNPPWVRPILDMDALLAEGDPWWQLAGKSPEDVREQRRTVTLALPGLADSVCRGITDVSGTGSFVGHATNYPMLQGLQPD LYRCFMCQTWAHTSSRGTIGLVHPETHFTDEKAGHLREETYPRLRRHWQFVNELKLFDEVHDLVTYGVHVYGSPAQPHFL QASALYHPDTVVGSLRHDGSGGAPGFKVDGHWDQRPHAQRIETVTDETLATWRDILDPNLEAPRRTRMLYTVNRDVAETL QQLSKAPRLGSLSLRFSPGWHEKNDRTKGYFIQQWGTPDSWNDVILQGPHLHVATPFYKSPNPTMKHNQDWSVVDLETLP PDAIPVTSYKPAGDRAWYDADYTHWDGDPARDHYRLAWRAMAANTGERTLIPAIIPPGTAHPNGVFCVGGADNRILTACA GFASSLLLDFSVRAAPKSGIYQAVFDRLPAPCQRHPLLPALLLRTLRLNCLTDAYADLWAECFDPSFTSDSWTIPDRATT PLGDVGPTWTSQTPLRRAVDRRQALVEIDALVALMLGITADQLCTVYRTQFAVLYGYDHDQYFYDAHGRLVPNQVLKVRR KKGEAITEAERTATTYRYDLPFHTYDRELDMHIAYVEFERRLETRGTDS
Sequences:
>Translated_929_residues MGSTLTRPRWSSPKSSCGSTPWPAASTPPGSACTCAVETPSLGHATPCIPATSSPRRPGLTTPPTDVPLTDLATRLDDDA ADPTQADGRIPHFLVPAAGWGSSADSKEAKTLVPQRVKDVKDWRKRFRRRPGRHDVTTLVELGHQVEDLWTMALRRLTVA EQQTSRDIALWGRDEAPSHRQVVTREQVEQSLADPDGAYQRLRLVMDAWCALWFWPLTTRVAPPSWAEWIDACTMLLGGR LSRADRRRDAPMLGSAQIWEALAAQEDLALASAGAATVAQTLDKHPWLQVCRQVAREQGFFHWQLDFAPVFARGGFDLQV GNPPWVRPILDMDALLAEGDPWWQLAGKSPEDVREQRRTVTLALPGLADSVCRGITDVSGTGSFVGHATNYPMLQGLQPD LYRCFMCQTWAHTSSRGTIGLVHPETHFTDEKAGHLREETYPRLRRHWQFVNELKLFDEVHDLVTYGVHVYGSPAQPHFL QASALYHPDTVVGSLRHDGSGGAPGFKVDGHWDQRPHAQRIETVTDETLATWRDILDPNLEAPRRTRMLYTVNRDVAETL QQLSKAPRLGSLSLRFSPGWHEKNDRTKGYFIQQWGTPDSWNDVILQGPHLHVATPFYKSPNPTMKHNQDWSVVDLETLP PDAIPVTSYKPAGDRAWYDADYTHWDGDPARDHYRLAWRAMAANTGERTLIPAIIPPGTAHPNGVFCVGGADNRILTACA GFASSLLLDFSVRAAPKSGIYQAVFDRLPAPCQRHPLLPALLLRTLRLNCLTDAYADLWAECFDPSFTSDSWTIPDRATT PLGDVGPTWTSQTPLRRAVDRRQALVEIDALVALMLGITADQLCTVYRTQFAVLYGYDHDQYFYDAHGRLVPNQVLKVRR KKGEAITEAERTATTYRYDLPFHTYDRELDMHIAYVEFERRLETRGTDS >Mature_928_residues GSTLTRPRWSSPKSSCGSTPWPAASTPPGSACTCAVETPSLGHATPCIPATSSPRRPGLTTPPTDVPLTDLATRLDDDAA DPTQADGRIPHFLVPAAGWGSSADSKEAKTLVPQRVKDVKDWRKRFRRRPGRHDVTTLVELGHQVEDLWTMALRRLTVAE QQTSRDIALWGRDEAPSHRQVVTREQVEQSLADPDGAYQRLRLVMDAWCALWFWPLTTRVAPPSWAEWIDACTMLLGGRL SRADRRRDAPMLGSAQIWEALAAQEDLALASAGAATVAQTLDKHPWLQVCRQVAREQGFFHWQLDFAPVFARGGFDLQVG NPPWVRPILDMDALLAEGDPWWQLAGKSPEDVREQRRTVTLALPGLADSVCRGITDVSGTGSFVGHATNYPMLQGLQPDL YRCFMCQTWAHTSSRGTIGLVHPETHFTDEKAGHLREETYPRLRRHWQFVNELKLFDEVHDLVTYGVHVYGSPAQPHFLQ ASALYHPDTVVGSLRHDGSGGAPGFKVDGHWDQRPHAQRIETVTDETLATWRDILDPNLEAPRRTRMLYTVNRDVAETLQ QLSKAPRLGSLSLRFSPGWHEKNDRTKGYFIQQWGTPDSWNDVILQGPHLHVATPFYKSPNPTMKHNQDWSVVDLETLPP DAIPVTSYKPAGDRAWYDADYTHWDGDPARDHYRLAWRAMAANTGERTLIPAIIPPGTAHPNGVFCVGGADNRILTACAG FASSLLLDFSVRAAPKSGIYQAVFDRLPAPCQRHPLLPALLLRTLRLNCLTDAYADLWAECFDPSFTSDSWTIPDRATTP LGDVGPTWTSQTPLRRAVDRRQALVEIDALVALMLGITADQLCTVYRTQFAVLYGYDHDQYFYDAHGRLVPNQVLKVRRK KGEAITEAERTATTYRYDLPFHTYDRELDMHIAYVEFERRLETRGTDS
Specific function: Unknown
COG id: COG1002
COG function: function code V; Type II restriction enzyme, methylase subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 104080; Mature: 103949
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSTLTRPRWSSPKSSCGSTPWPAASTPPGSACTCAVETPSLGHATPCIPATSSPRRPGL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC TTPPTDVPLTDLATRLDDDAADPTQADGRIPHFLVPAAGWGSSADSKEAKTLVPQRVKDV CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHH KDWRKRFRRRPGRHDVTTLVELGHQVEDLWTMALRRLTVAEQQTSRDIALWGRDEAPSHR HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHH QVVTREQVEQSLADPDGAYQRLRLVMDAWCALWFWPLTTRVAPPSWAEWIDACTMLLGGR HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC LSRADRRRDAPMLGSAQIWEALAAQEDLALASAGAATVAQTLDKHPWLQVCRQVAREQGF HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHCCC FHWQLDFAPVFARGGFDLQVGNPPWVRPILDMDALLAEGDPWWQLAGKSPEDVREQRRTV EEEEEECEEEEECCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEECCCCHHHHHHHHCEE TLALPGLADSVCRGITDVSGTGSFVGHATNYPMLQGLQPDLYRCFMCQTWAHTSSRGTIG EEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCCCEEE LVHPETHFTDEKAGHLREETYPRLRRHWQFVNELKLFDEVHDLVTYGVHVYGSPAQPHFL EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCEE QASALYHPDTVVGSLRHDGSGGAPGFKVDGHWDQRPHAQRIETVTDETLATWRDILDPNL EHHCCCCCHHHHHHHCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC EAPRRTRMLYTVNRDVAETLQQLSKAPRLGSLSLRFSPGWHEKNDRTKGYFIQQWGTPDS CCCCCEEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCC WNDVILQGPHLHVATPFYKSPNPTMKHNQDWSVVDLETLPPDAIPVTSYKPAGDRAWYDA CCCEEEECCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEECC DYTHWDGDPARDHYRLAWRAMAANTGERTLIPAIIPPGTAHPNGVFCVGGADNRILTACA CCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCHHHHHH GFASSLLLDFSVRAAPKSGIYQAVFDRLPAPCQRHPLLPALLLRTLRLNCLTDAYADLWA HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ECFDPSFTSDSWTIPDRATTPLGDVGPTWTSQTPLRRAVDRRQALVEIDALVALMLGITA HHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH DQLCTVYRTQFAVLYGYDHDQYFYDAHGRLVPNQVLKVRRKKGEAITEAERTATTYRYDL HHHHHHHHHHEEEEEECCCCCEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHCEEEEEC PFHTYDRELDMHIAYVEFERRLETRGTDS CCCCCCCCCCEEEEEHHHHHHHHCCCCCC >Mature Secondary Structure GSTLTRPRWSSPKSSCGSTPWPAASTPPGSACTCAVETPSLGHATPCIPATSSPRRPGL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC TTPPTDVPLTDLATRLDDDAADPTQADGRIPHFLVPAAGWGSSADSKEAKTLVPQRVKDV CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHH KDWRKRFRRRPGRHDVTTLVELGHQVEDLWTMALRRLTVAEQQTSRDIALWGRDEAPSHR HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHH QVVTREQVEQSLADPDGAYQRLRLVMDAWCALWFWPLTTRVAPPSWAEWIDACTMLLGGR HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC LSRADRRRDAPMLGSAQIWEALAAQEDLALASAGAATVAQTLDKHPWLQVCRQVAREQGF HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHCCC FHWQLDFAPVFARGGFDLQVGNPPWVRPILDMDALLAEGDPWWQLAGKSPEDVREQRRTV EEEEEECEEEEECCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEECCCCHHHHHHHHCEE TLALPGLADSVCRGITDVSGTGSFVGHATNYPMLQGLQPDLYRCFMCQTWAHTSSRGTIG EEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCCCEEE LVHPETHFTDEKAGHLREETYPRLRRHWQFVNELKLFDEVHDLVTYGVHVYGSPAQPHFL EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCEE QASALYHPDTVVGSLRHDGSGGAPGFKVDGHWDQRPHAQRIETVTDETLATWRDILDPNL EHHCCCCCHHHHHHHCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC EAPRRTRMLYTVNRDVAETLQQLSKAPRLGSLSLRFSPGWHEKNDRTKGYFIQQWGTPDS CCCCCEEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCC WNDVILQGPHLHVATPFYKSPNPTMKHNQDWSVVDLETLPPDAIPVTSYKPAGDRAWYDA CCCEEEECCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEECC DYTHWDGDPARDHYRLAWRAMAANTGERTLIPAIIPPGTAHPNGVFCVGGADNRILTACA CCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCHHHHHH GFASSLLLDFSVRAAPKSGIYQAVFDRLPAPCQRHPLLPALLLRTLRLNCLTDAYADLWA HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHH ECFDPSFTSDSWTIPDRATTPLGDVGPTWTSQTPLRRAVDRRQALVEIDALVALMLGITA HHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH DQLCTVYRTQFAVLYGYDHDQYFYDAHGRLVPNQVLKVRRKKGEAITEAERTATTYRYDL HHHHHHHHHHEEEEEECCCCCEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHCEEEEEC PFHTYDRELDMHIAYVEFERRLETRGTDS CCCCCCCCCCEEEEEHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA