| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50843077
Identifier: 50843077
GI number: 50843077
Start: 1733500
End: 1735374
Strand: Direct
Name: 50843077
Synonym: PPA1609
Alternate gene names: NA
Gene position: 1733500-1735374 (Clockwise)
Preceding gene: 50843076
Following gene: 50843078
Centisome position: 67.71
GC content: 58.13
Gene sequence:
>1875_bases ATGACACCAGGCTTCTGGATCAGCAGCATCACCGTGGCCGGGCACCCCACTCGGCGGGACTCCAGCGTCGGTTTCGAATC TGGACTCAACGTCATCTACGGACCGTCTAACTCCGGCAAGTCCTGGGTGCTTCAGTGCATCGACTACGTGTTCGGGCTGA AAGCCGACGAGTTCGTCCTCGACGAAAACTCCGGCTACACCGAGGTGCGTATGGGGGTGCGCACCGCGCAGGGCTCACTC ACGTTATCGCGCCCCATCGGTGAGGGAGCCAATAACATCGAGGTCTCCAGCACAGACCCACGAATTGAGTCTGGAACCTA CAAACGTCAATCGTCTGGCCGTTCCCCGCTACTCAGCTCGGTGTGGCTCAAACTCATCGGCTACGACGCCCCTGAAAACC TGAAAATCATCAAGAATCAAAACCTTGAAACCCAGGCGTTGACGTGGCGCACCTTCTGGCATGCGCTGTACGCGGATGAA GACCGGATCAGCACCAAGAAACCAATCCTTCTCCCTCTTCAGACCACCGCACAGCCCGCGTTCAAATGCGCCCTAGCGTC ACTGATCACCGGCAAGGACTATGCCGCCTACGCTCGTGATGAGTCTGTCGAAACGAGGAAATTGCGTAACAACGCGATCA TCGACTACCTCGAGCCGCTACCCAAACAGCTTGAAGAACGAATCGAGTTGATCGACAAAGCACTCGGTAGCAGCGACCCA GCAGAGATCCAGCAGCGCATCGATGAGCTGATCGCAGAACTGGAACGTGTCCAGCAACGCATCACACACGCCACCGTGCA GGGGCAAGACGTCATCGCACGCCTCCAACAGGTGCGTGACTCGCTGGCGGAATCCCGCAGTCTGCGGAACCGATACGAGG AACTTGCCGCCTCCTACCGTGCCCGCATCGAGCGGTTCGATTTCGTCGAGGAAGGCCACGCCCTCACCGCACACAGGGAA CCGGCAACAACCTGCCCCGTATGCACGCAGGCACTACCACCGGAAGCGCGATCCGCAGTTCCAGAGCCCGATCTGCGTGA ACGCCACGACCTAGCTGCCCGACTCAACGATCTTCGTCAAACGATCCATCAGATGGATCTTGAACAGGCACCACTGCAAG AACAAGAGCAGGATCTCGCCGCAGAAGCCGAGCGCATCGCCCGGCGCATCAGCGGCGAGTTAGAGCCGCAACTGCAAGCC CTCTCGACTTCGCTTGCCAGCCACAACGCGATCATCGCCATGCAGGCAGAAAGAGAACAGCACCTCGAACGCAAACAAGC CATCGAAGACGAACTTGAAGAACGCAAGAATCGCACATTCCCCAAGGGCAACTTCAATCCGCTCGACGAATACCCGAAAA CGTTCTGGCCGCAGATGGGCACCAACCTGCTCGACATCCTTGGAGCCTGCGCGTTCCCCAGACTCAAAGATGCCCGATTC TCGCGTGAACTGTTCGATGCTGTCATCAACGGCAAAACCAAAGCGGAGGAAGGGCAGGGCTACCGGTCGTTCGTCAACAC CGCTGTCATGCTCGCCCTCCGGGAATACCTCGCCTCCGAGGACGCCACACACAACCCCGGCCTGCTCATCATCGACACCC CACTACTGGGGCTCGACGATCCACAGCTCGACCCCGAGCTTCAAGAAGCCCGTGAAACCATCCCCGCTGCCCTCTACGAC TACCTCGCCCTCGAACAAGACGGCGGTCAGATGATCATCGCTGACAACACCAAGTTCATGCCCGACATAGAACCACTAAA GGACCGATGCAAACTCATCGTATTCACGAAACGCGAAGGAGAAGGACGCTACGGCTTCCTGCTCGATGCCCAGGACGAAG ACCTGATCGATCTGGAGGAAACAGATGACAACTAA
Upstream 100 bases:
>100_bases TGTTCGACACCGCGTTGGAGACGATCGAGCGGGTTGGCGACCTGAGCACGAGCGAGCTGGCTCAGATCATCAGGTCAGCG ACCCCGGAAGGAGAAACGCG
Downstream 100 bases:
>100_bases CCGCGCCTTCAGCTACAAGCCCCTCTGGAAACTCCTCATCGACCGCGACATGAACAAAATCCAACTTCAAGAACGTGCAG GCATCAGTCCAGCCACCCTG
Product: phage-associated protein
Products: NA
Alternate protein names: Phage Protein
Number of amino acids: Translated: 624; Mature: 623
Protein sequence:
>624_residues MTPGFWISSITVAGHPTRRDSSVGFESGLNVIYGPSNSGKSWVLQCIDYVFGLKADEFVLDENSGYTEVRMGVRTAQGSL TLSRPIGEGANNIEVSSTDPRIESGTYKRQSSGRSPLLSSVWLKLIGYDAPENLKIIKNQNLETQALTWRTFWHALYADE DRISTKKPILLPLQTTAQPAFKCALASLITGKDYAAYARDESVETRKLRNNAIIDYLEPLPKQLEERIELIDKALGSSDP AEIQQRIDELIAELERVQQRITHATVQGQDVIARLQQVRDSLAESRSLRNRYEELAASYRARIERFDFVEEGHALTAHRE PATTCPVCTQALPPEARSAVPEPDLRERHDLAARLNDLRQTIHQMDLEQAPLQEQEQDLAAEAERIARRISGELEPQLQA LSTSLASHNAIIAMQAEREQHLERKQAIEDELEERKNRTFPKGNFNPLDEYPKTFWPQMGTNLLDILGACAFPRLKDARF SRELFDAVINGKTKAEEGQGYRSFVNTAVMLALREYLASEDATHNPGLLIIDTPLLGLDDPQLDPELQEARETIPAALYD YLALEQDGGQMIIADNTKFMPDIEPLKDRCKLIVFTKREGEGRYGFLLDAQDEDLIDLEETDDN
Sequences:
>Translated_624_residues MTPGFWISSITVAGHPTRRDSSVGFESGLNVIYGPSNSGKSWVLQCIDYVFGLKADEFVLDENSGYTEVRMGVRTAQGSL TLSRPIGEGANNIEVSSTDPRIESGTYKRQSSGRSPLLSSVWLKLIGYDAPENLKIIKNQNLETQALTWRTFWHALYADE DRISTKKPILLPLQTTAQPAFKCALASLITGKDYAAYARDESVETRKLRNNAIIDYLEPLPKQLEERIELIDKALGSSDP AEIQQRIDELIAELERVQQRITHATVQGQDVIARLQQVRDSLAESRSLRNRYEELAASYRARIERFDFVEEGHALTAHRE PATTCPVCTQALPPEARSAVPEPDLRERHDLAARLNDLRQTIHQMDLEQAPLQEQEQDLAAEAERIARRISGELEPQLQA LSTSLASHNAIIAMQAEREQHLERKQAIEDELEERKNRTFPKGNFNPLDEYPKTFWPQMGTNLLDILGACAFPRLKDARF SRELFDAVINGKTKAEEGQGYRSFVNTAVMLALREYLASEDATHNPGLLIIDTPLLGLDDPQLDPELQEARETIPAALYD YLALEQDGGQMIIADNTKFMPDIEPLKDRCKLIVFTKREGEGRYGFLLDAQDEDLIDLEETDDN >Mature_623_residues TPGFWISSITVAGHPTRRDSSVGFESGLNVIYGPSNSGKSWVLQCIDYVFGLKADEFVLDENSGYTEVRMGVRTAQGSLT LSRPIGEGANNIEVSSTDPRIESGTYKRQSSGRSPLLSSVWLKLIGYDAPENLKIIKNQNLETQALTWRTFWHALYADED RISTKKPILLPLQTTAQPAFKCALASLITGKDYAAYARDESVETRKLRNNAIIDYLEPLPKQLEERIELIDKALGSSDPA EIQQRIDELIAELERVQQRITHATVQGQDVIARLQQVRDSLAESRSLRNRYEELAASYRARIERFDFVEEGHALTAHREP ATTCPVCTQALPPEARSAVPEPDLRERHDLAARLNDLRQTIHQMDLEQAPLQEQEQDLAAEAERIARRISGELEPQLQAL STSLASHNAIIAMQAEREQHLERKQAIEDELEERKNRTFPKGNFNPLDEYPKTFWPQMGTNLLDILGACAFPRLKDARFS RELFDAVINGKTKAEEGQGYRSFVNTAVMLALREYLASEDATHNPGLLIIDTPLLGLDDPQLDPELQEARETIPAALYDY LALEQDGGQMIIADNTKFMPDIEPLKDRCKLIVFTKREGEGRYGFLLDAQDEDLIDLEETDDN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70290; Mature: 70159
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPGFWISSITVAGHPTRRDSSVGFESGLNVIYGPSNSGKSWVLQCIDYVFGLKADEFVL CCCCEEEEEEEECCCCCCCCCCCCHHHCCCEEECCCCCCHHHHHHHHHHHHCCCCCCEEE DENSGYTEVRMGVRTAQGSLTLSRPIGEGANNIEVSSTDPRIESGTYKRQSSGRSPLLSS ECCCCCHHHHHHHEECCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCHHCCCCCHHHHH VWLKLIGYDAPENLKIIKNQNLETQALTWRTFWHALYADEDRISTKKPILLPLQTTAQPA HHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCHHCCCCCCEEEECCCCCCHH FKCALASLITGKDYAAYARDESVETRKLRNNAIIDYLEPLPKQLEERIELIDKALGSSDP HHHHHHHHHCCCCHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH AEIQQRIDELIAELERVQQRITHATVQGQDVIARLQQVRDSLAESRSLRNRYEELAASYR HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARIERFDFVEEGHALTAHREPATTCPVCTQALPPEARSAVPEPDLRERHDLAARLNDLRQ HHHHHHHHHHCCCEEECCCCCCCCCCHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHH TIHQMDLEQAPLQEQEQDLAAEAERIARRISGELEPQLQALSTSLASHNAIIAMQAEREQ HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEECHHHH HLERKQAIEDELEERKNRTFPKGNFNPLDEYPKTFWPQMGTNLLDILGACAFPRLKDARF HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHH SRELFDAVINGKTKAEEGQGYRSFVNTAVMLALREYLASEDATHNPGLLIIDTPLLGLDD HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC PQLDPELQEARETIPAALYDYLALEQDGGQMIIADNTKFMPDIEPLKDRCKLIVFTKREG CCCCHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCCHHHHCCCEEEEEEEECC EGRYGFLLDAQDEDLIDLEETDDN CCCEEEEEECCCCCCEECCCCCCC >Mature Secondary Structure TPGFWISSITVAGHPTRRDSSVGFESGLNVIYGPSNSGKSWVLQCIDYVFGLKADEFVL CCCEEEEEEEECCCCCCCCCCCCHHHCCCEEECCCCCCHHHHHHHHHHHHCCCCCCEEE DENSGYTEVRMGVRTAQGSLTLSRPIGEGANNIEVSSTDPRIESGTYKRQSSGRSPLLSS ECCCCCHHHHHHHEECCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCHHCCCCCHHHHH VWLKLIGYDAPENLKIIKNQNLETQALTWRTFWHALYADEDRISTKKPILLPLQTTAQPA HHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCHHCCCCCCEEEECCCCCCHH FKCALASLITGKDYAAYARDESVETRKLRNNAIIDYLEPLPKQLEERIELIDKALGSSDP HHHHHHHHHCCCCHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH AEIQQRIDELIAELERVQQRITHATVQGQDVIARLQQVRDSLAESRSLRNRYEELAASYR HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARIERFDFVEEGHALTAHREPATTCPVCTQALPPEARSAVPEPDLRERHDLAARLNDLRQ HHHHHHHHHHCCCEEECCCCCCCCCCHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHH TIHQMDLEQAPLQEQEQDLAAEAERIARRISGELEPQLQALSTSLASHNAIIAMQAEREQ HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEECHHHH HLERKQAIEDELEERKNRTFPKGNFNPLDEYPKTFWPQMGTNLLDILGACAFPRLKDARF HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHH SRELFDAVINGKTKAEEGQGYRSFVNTAVMLALREYLASEDATHNPGLLIIDTPLLGLDD HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC PQLDPELQEARETIPAALYDYLALEQDGGQMIIADNTKFMPDIEPLKDRCKLIVFTKREG CCCCHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCCHHHHCCCEEEEEEEECC EGRYGFLLDAQDEDLIDLEETDDN CCCEEEEEECCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA