| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50843074
Identifier: 50843074
GI number: 50843074
Start: 1730957
End: 1731550
Strand: Reverse
Name: 50843074
Synonym: PPA1606
Alternate gene names: NA
Gene position: 1731550-1730957 (Counterclockwise)
Preceding gene: 50843081
Following gene: 50843073
Centisome position: 67.63
GC content: 65.66
Gene sequence:
>594_bases GTGCCCGTCACTGTTTCCGCTCAACACCACGGTCTCTCGTCGGTTGCCCTCAACGGGGTCTCCCTTCGCAAGAAGGGAAG CCCTCACGTGGCATTCAACAGACAATTCACTGTCCCGTACCTGACCCCCAGGGGCAACACCATCGACCTACCCGTCCCTG ACCTGCCCGACAGCGAAGAACTGCGTGCCCAGCTGCGCGACCCGGCTTCGCGTCCGAAGTGGGCTCGCGCCTACCTCGAC GACGTGTACGCCGAGTACCGCGAGCTGGACAATCGCCGCCGCTCCGACATCTCCGTCGACCAACCCGGCCACGGTGATGA CGACGAGCGTGGCGGGCTGGGCGCGGATTACTTCGCCTCGGACGATCCGGACTTCACCGAGCAGGTCGAGGCCAACCTCG CGGTGGTCGAACTGCTGAGTCCGCTGACTGCGACGCAGCGCGAGTACATCGAGCTGCATGTGCTCCACGGCGACCGGTTC ACCGAGATCGCCGCCGACAAGACCGGCGCAGGCCAGCCGACCAGTGCCGATGCGGTGCGGAAAGCCGTCTCGCGCGGTCT GGCCCAACTGCGCAAAACACTCACCGAGTCGTAG
Upstream 100 bases:
>100_bases CCTCCTACACCCGCATGCGTTTTTCAACCGTATTCGGGAGACCTCCGTTGAGCGCTTGACGGGCACCACCTGTACCCGGG TTCACCCCCGGGTCGGGTTG
Downstream 100 bases:
>100_bases GCCGTCCGGTTTCGGTGCGTCCCATGCCTGACAGATGCAAGGCACTCCCTTCACCAGCCCGGTGATGGGGCGTACCACCA CTCACATGGAAGGAAACCCG
Product: phage-associated protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MPVTVSAQHHGLSSVALNGVSLRKKGSPHVAFNRQFTVPYLTPRGNTIDLPVPDLPDSEELRAQLRDPASRPKWARAYLD DVYAEYRELDNRRRSDISVDQPGHGDDDERGGLGADYFASDDPDFTEQVEANLAVVELLSPLTATQREYIELHVLHGDRF TEIAADKTGAGQPTSADAVRKAVSRGLAQLRKTLTES
Sequences:
>Translated_197_residues MPVTVSAQHHGLSSVALNGVSLRKKGSPHVAFNRQFTVPYLTPRGNTIDLPVPDLPDSEELRAQLRDPASRPKWARAYLD DVYAEYRELDNRRRSDISVDQPGHGDDDERGGLGADYFASDDPDFTEQVEANLAVVELLSPLTATQREYIELHVLHGDRF TEIAADKTGAGQPTSADAVRKAVSRGLAQLRKTLTES >Mature_196_residues PVTVSAQHHGLSSVALNGVSLRKKGSPHVAFNRQFTVPYLTPRGNTIDLPVPDLPDSEELRAQLRDPASRPKWARAYLDD VYAEYRELDNRRRSDISVDQPGHGDDDERGGLGADYFASDDPDFTEQVEANLAVVELLSPLTATQREYIELHVLHGDRFT EIAADKTGAGQPTSADAVRKAVSRGLAQLRKTLTES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21690; Mature: 21559
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVTVSAQHHGLSSVALNGVSLRKKGSPHVAFNRQFTVPYLTPRGNTIDLPVPDLPDSEE CCEEECCHHCCHHHHHCCCEEECCCCCCCEEECCEEECEEECCCCCEEECCCCCCCCHHH LRAQLRDPASRPKWARAYLDDVYAEYRELDNRRRSDISVDQPGHGDDDERGGLGADYFAS HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC DDPDFTEQVEANLAVVELLSPLTATQREYIELHVLHGDRFTEIAADKTGAGQPTSADAVR CCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCHHHHHCCCCCCCCCCCHHHHH KAVSRGLAQLRKTLTES HHHHHHHHHHHHHHCCC >Mature Secondary Structure PVTVSAQHHGLSSVALNGVSLRKKGSPHVAFNRQFTVPYLTPRGNTIDLPVPDLPDSEE CEEECCHHCCHHHHHCCCEEECCCCCCCEEECCEEECEEECCCCCEEECCCCCCCCHHH LRAQLRDPASRPKWARAYLDDVYAEYRELDNRRRSDISVDQPGHGDDDERGGLGADYFAS HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC DDPDFTEQVEANLAVVELLSPLTATQREYIELHVLHGDRFTEIAADKTGAGQPTSADAVR CCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCHHHHHCCCCCCCCCCCHHHHH KAVSRGLAQLRKTLTES HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA