Click here to switch to the map view.

The map label for this gene is 50843066

Identifier: 50843066

GI number: 50843066

Start: 1721656

End: 1723914

Strand: Reverse

Name: 50843066

Synonym: PPA1596

Alternate gene names: NA

Gene position: 1723914-1721656 (Counterclockwise)

Preceding gene: 50843067

Following gene: 50843065

Centisome position: 67.33

GC content: 63.3

Gene sequence:

>2259_bases
ATGACTCCGTTCACCTTGTGCGCCGCCACGAGTAGCGGCAACCCGCACAATAACCATTACCCGAACCACCACCACATCAC
CGACCAAACCTCGCTGGAGCAGGTGGCGTGGTTGGATCACGTCGCCGCCACCTACACCGGCGACCGGCGCTCCTCGGCGA
GCTTCATCTCCTCGGACTGTGTCGTGATGGATATCGACAACGACCACACCGACAACCCCGACGAGTGGATCACCCCAGAT
GACCTGGCCGAGCTGATGGCGGGGGTTGAGTTCATGACCGCCACCAGCCGTAACCACCAGAAGCCGAAAAGGACGCTGTC
GGCCAGGCCTCGCTTCCACGTCTACTTCCCAATCAGCCCGGTCACCGACGCCGACACCTATGCGGGGTTGAAGCGCCGCC
TCGCTGGACGGTTCGGGTTCTTCGACCCGCAGGCGTTGGATGCCGGACGGTTCATCTACGGCACCACCAACCCCGAAACC
ACCATCCACAACGGCACAAAGCTGCTCGACGCCTGGCTGGATGAGGCCGACGAGATCGACGTGTTCGCCGCGTTCGACGC
TTCCACGCAGGTGATCGGGGAAGGCTCCCGCAACGCCACCCTCTCCCGCTTCGCCGGACGCGTCCTGATCCGTTACGGGC
AGACCGCCCAAGCTCGTGACCTGTTCGACCGGAAAGCGTCCCTGTGTGAACCGCCCCTGTCGGATCACGAGTTGGAGTCG
ATCTGGCAAAGCGCCTGCCGGTTCGCCGCCAAAGTCGAGGCGCAGCCGGGTTATCTGTCGCCGGAAGCCTACGCGGAGCT
GACGAGCCTGCGGCCGGAGGACTTCACCGATGTCGGGCAGGCATCCATGCTCACCGCAGAATACTCGTCGCGTCTGGCGT
TTACGGAGGCCACGGACTGGCTCGTCTACGAAGGCGGTGTGTGGTCTGAGTCTGCGCCTGCTGCGCAAGGCATCGCCCAG
GAACTGACCGACCGGCAACTAGCCGAGGCCGGGCATCTGCTGGAGAAAGCCCGCGACGAGCTCATGGTGACGGGCGCGAA
CGCGGTGCTCGCAGCCGCATCGTCGAAAGCGAAAGCACTCGGCGGTTTCACCTCACCGCAGCGGGCCGCCTACCGGGCAT
TTGAGGACGCGAAGGCATACGAGGCGTTCGTGTTGAAACGCCGCGAGTCCCGGGCGATCACCTCCTGCCTGAGGGAAGCA
CACCCGATGTTGCTGACCACCCCAGCCCGGCTGGACGCTGACCCGTATCTCCTCAACACGCCTGGCGGCACGTGGGATGT
GCGTGACGGCACCCGACGTGACCATAACCCGCTGGATCTGATCACGAAACAAACCGCGCTCGACCCCACCGACACGGGCG
CAGAAATCTGGAACCGGGCGCTCAACGTGTTCTTCCAATCCGACCGGGAGCTGATCGGGTATGTGCAGCGGATCGTCGGG
CTGGCAGCGATCGGGACGGTCATGGTCGAAGCCCTCGTGATCGCCTACGGGGACGGCCGCAACGGCAAGTCCACGTTCTG
GAACACTATCGCGAGAGTGCTTGGCACGTATGCGGGCAACATGTCCGCCGACGTGCTCACCATTGGCGGGAACCGGAACG
TCAAACCTGAGCTTGCCGAAGCGAAAGGCAAACGGCTCATCATCGCCGCAGAGTCCGAGGAAGGCGTGCGCCTATCCACC
TCCACGGTCAAGCAACTCGCCTCCACCGACCAGATCTACGCGGAGAAGAAATACAAGGCACCGTTCGCGTTCACCCCATC
CCACACGCTCATCCTCTACACGAATCACCTGCCCAGGGTGGGCGCGATGGATGCGGGCATCTGGCGCAGGCTCATCGTGA
TCCCGTTCAACGCGGTCATCGAGAGTAGCTCCGATGTGAAGAACTACGCCGACCACCTCTACGAGACCGCCGGCGGAGCG
GTACTTGCATGGATCATGGAAGGCTCGCGGCTCATCCACGCCGAGGACTACCAGCTCACCCCACCCGCCCAAGTGGTCGC
TGCCTCAAGCGCATATCGGGAAGAGAACAACTGGTTCGCCCAATTCCTCGACGCCCGCTGCGAGGTGGACCCGTCCCTAT
CCGAACGCGCCGGTGACCTGTACCAGGAGTACCGAGCGTGGGCGCAATCCACCAGCGGGTGGGCTCGGCCGATGGCCGAC
TTCAACGCCACTCTCGAACAATCCGGGTTTGAACGACGCAAGTCCAAGCATGGCATGTACGTCTACGGACTGGCTCTGAC
CAGCGAATTCAACAGCTAA

Upstream 100 bases:

>100_bases
GCAGGGTCAGCCCGGGGATGCGGGCGGAGATCGACTGGGCCCATCAGATGGATATCCCGATCCGCTTCTTCGACGCCGAC
TTCCAGGAGGTGCATCCCGC

Downstream 100 bases:

>100_bases
ACCCGATGAGGGTGACGACCGGTGACGATCAGTATTGAACTATTACTAAGGCCACAAAAATATCTCCTTTAGAAAAGTCC
AGATCCACCCGTCACCAGTC

Product: phage-associated protein

Products: NA

Alternate protein names: Phage/Plasmid Primase P4 Family; DNA Primase/Helicase; Phage DNA Polymerase; Phage Primase; DNA Primase; Primase; Prophage; Phage-Like Protein; Nucleoside Triphosphatase D5 Family; Phage-Associated Protein; Phage/Plasmid Primase; Phage/Plasmid DNA Primase; Phage/Plasmid Primase P4-Like; Bacteriophage-Related Protein; DNA-Polymerase Or DNA-Primase; Bacteriophage Related Protein; Bacteriophage Protein; Primase P4-Like Protein; D5 N-Terminal Domain Family Protein; Phage Associated DNA Primase; DNA Primase Phage/Plasmid; Phage/Plasmid Primase P4-Like Protein

Number of amino acids: Translated: 752; Mature: 751

Protein sequence:

>752_residues
MTPFTLCAATSSGNPHNNHYPNHHHITDQTSLEQVAWLDHVAATYTGDRRSSASFISSDCVVMDIDNDHTDNPDEWITPD
DLAELMAGVEFMTATSRNHQKPKRTLSARPRFHVYFPISPVTDADTYAGLKRRLAGRFGFFDPQALDAGRFIYGTTNPET
TIHNGTKLLDAWLDEADEIDVFAAFDASTQVIGEGSRNATLSRFAGRVLIRYGQTAQARDLFDRKASLCEPPLSDHELES
IWQSACRFAAKVEAQPGYLSPEAYAELTSLRPEDFTDVGQASMLTAEYSSRLAFTEATDWLVYEGGVWSESAPAAQGIAQ
ELTDRQLAEAGHLLEKARDELMVTGANAVLAAASSKAKALGGFTSPQRAAYRAFEDAKAYEAFVLKRRESRAITSCLREA
HPMLLTTPARLDADPYLLNTPGGTWDVRDGTRRDHNPLDLITKQTALDPTDTGAEIWNRALNVFFQSDRELIGYVQRIVG
LAAIGTVMVEALVIAYGDGRNGKSTFWNTIARVLGTYAGNMSADVLTIGGNRNVKPELAEAKGKRLIIAAESEEGVRLST
STVKQLASTDQIYAEKKYKAPFAFTPSHTLILYTNHLPRVGAMDAGIWRRLIVIPFNAVIESSSDVKNYADHLYETAGGA
VLAWIMEGSRLIHAEDYQLTPPAQVVAASSAYREENNWFAQFLDARCEVDPSLSERAGDLYQEYRAWAQSTSGWARPMAD
FNATLEQSGFERRKSKHGMYVYGLALTSEFNS

Sequences:

>Translated_752_residues
MTPFTLCAATSSGNPHNNHYPNHHHITDQTSLEQVAWLDHVAATYTGDRRSSASFISSDCVVMDIDNDHTDNPDEWITPD
DLAELMAGVEFMTATSRNHQKPKRTLSARPRFHVYFPISPVTDADTYAGLKRRLAGRFGFFDPQALDAGRFIYGTTNPET
TIHNGTKLLDAWLDEADEIDVFAAFDASTQVIGEGSRNATLSRFAGRVLIRYGQTAQARDLFDRKASLCEPPLSDHELES
IWQSACRFAAKVEAQPGYLSPEAYAELTSLRPEDFTDVGQASMLTAEYSSRLAFTEATDWLVYEGGVWSESAPAAQGIAQ
ELTDRQLAEAGHLLEKARDELMVTGANAVLAAASSKAKALGGFTSPQRAAYRAFEDAKAYEAFVLKRRESRAITSCLREA
HPMLLTTPARLDADPYLLNTPGGTWDVRDGTRRDHNPLDLITKQTALDPTDTGAEIWNRALNVFFQSDRELIGYVQRIVG
LAAIGTVMVEALVIAYGDGRNGKSTFWNTIARVLGTYAGNMSADVLTIGGNRNVKPELAEAKGKRLIIAAESEEGVRLST
STVKQLASTDQIYAEKKYKAPFAFTPSHTLILYTNHLPRVGAMDAGIWRRLIVIPFNAVIESSSDVKNYADHLYETAGGA
VLAWIMEGSRLIHAEDYQLTPPAQVVAASSAYREENNWFAQFLDARCEVDPSLSERAGDLYQEYRAWAQSTSGWARPMAD
FNATLEQSGFERRKSKHGMYVYGLALTSEFNS
>Mature_751_residues
TPFTLCAATSSGNPHNNHYPNHHHITDQTSLEQVAWLDHVAATYTGDRRSSASFISSDCVVMDIDNDHTDNPDEWITPDD
LAELMAGVEFMTATSRNHQKPKRTLSARPRFHVYFPISPVTDADTYAGLKRRLAGRFGFFDPQALDAGRFIYGTTNPETT
IHNGTKLLDAWLDEADEIDVFAAFDASTQVIGEGSRNATLSRFAGRVLIRYGQTAQARDLFDRKASLCEPPLSDHELESI
WQSACRFAAKVEAQPGYLSPEAYAELTSLRPEDFTDVGQASMLTAEYSSRLAFTEATDWLVYEGGVWSESAPAAQGIAQE
LTDRQLAEAGHLLEKARDELMVTGANAVLAAASSKAKALGGFTSPQRAAYRAFEDAKAYEAFVLKRRESRAITSCLREAH
PMLLTTPARLDADPYLLNTPGGTWDVRDGTRRDHNPLDLITKQTALDPTDTGAEIWNRALNVFFQSDRELIGYVQRIVGL
AAIGTVMVEALVIAYGDGRNGKSTFWNTIARVLGTYAGNMSADVLTIGGNRNVKPELAEAKGKRLIIAAESEEGVRLSTS
TVKQLASTDQIYAEKKYKAPFAFTPSHTLILYTNHLPRVGAMDAGIWRRLIVIPFNAVIESSSDVKNYADHLYETAGGAV
LAWIMEGSRLIHAEDYQLTPPAQVVAASSAYREENNWFAQFLDARCEVDPSLSERAGDLYQEYRAWAQSTSGWARPMADF
NATLEQSGFERRKSKHGMYVYGLALTSEFNS

Specific function: Unknown

COG id: COG3378

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82984; Mature: 82853

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPFTLCAATSSGNPHNNHYPNHHHITDQTSLEQVAWLDHVAATYTGDRRSSASFISSDC
CCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCC
VVMDIDNDHTDNPDEWITPDDLAELMAGVEFMTATSRNHQKPKRTLSARPRFHVYFPISP
EEEECCCCCCCCCCCCCCHHHHHHHHHCHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCC
VTDADTYAGLKRRLAGRFGFFDPQALDAGRFIYGTTNPETTIHNGTKLLDAWLDEADEID
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCEECCCHHHHHHHHCCCCCEE
VFAAFDASTQVIGEGSRNATLSRFAGRVLIRYGQTAQARDLFDRKASLCEPPLSDHELES
EEEEECCCCCEECCCCCCCHHHHHHHHEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHH
IWQSACRFAAKVEAQPGYLSPEAYAELTSLRPEDFTDVGQASMLTAEYSSRLAFTEATDW
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHCCCHHEEHHHHHCCEEEEECCCE
LVYEGGVWSESAPAAQGIAQELTDRQLAEAGHLLEKARDELMVTGANAVLAAASSKAKAL
EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEECCCHHHHH
GGFTSPQRAAYRAFEDAKAYEAFVLKRRESRAITSCLREAHPMLLTTPARLDADPYLLNT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEC
PGGTWDVRDGTRRDHNPLDLITKQTALDPTDTGAEIWNRALNVFFQSDRELIGYVQRIVG
CCCCEECCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LAAIGTVMVEALVIAYGDGRNGKSTFWNTIARVLGTYAGNMSADVLTIGGNRNVKPELAE
HHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHH
AKGKRLIIAAESEEGVRLSTSTVKQLASTDQIYAEKKYKAPFAFTPSHTLILYTNHLPRV
CCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEECCCCCC
GAMDAGIWRRLIVIPFNAVIESSSDVKNYADHLYETAGGAVLAWIMEGSRLIHAEDYQLT
CCCCHHHHHEEEEEEHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCC
PPAQVVAASSAYREENNWFAQFLDARCEVDPSLSERAGDLYQEYRAWAQSTSGWARPMAD
CCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH
FNATLEQSGFERRKSKHGMYVYGLALTSEFNS
HHHHHHHHHHHHHHHCCCEEEEEEEEECCCCC
>Mature Secondary Structure 
TPFTLCAATSSGNPHNNHYPNHHHITDQTSLEQVAWLDHVAATYTGDRRSSASFISSDC
CCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCC
VVMDIDNDHTDNPDEWITPDDLAELMAGVEFMTATSRNHQKPKRTLSARPRFHVYFPISP
EEEECCCCCCCCCCCCCCHHHHHHHHHCHHHHHHCCCCCCCHHHHHCCCCCEEEEECCCC
VTDADTYAGLKRRLAGRFGFFDPQALDAGRFIYGTTNPETTIHNGTKLLDAWLDEADEID
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCEECCCHHHHHHHHCCCCCEE
VFAAFDASTQVIGEGSRNATLSRFAGRVLIRYGQTAQARDLFDRKASLCEPPLSDHELES
EEEEECCCCCEECCCCCCCHHHHHHHHEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHH
IWQSACRFAAKVEAQPGYLSPEAYAELTSLRPEDFTDVGQASMLTAEYSSRLAFTEATDW
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHCCCHHEEHHHHHCCEEEEECCCE
LVYEGGVWSESAPAAQGIAQELTDRQLAEAGHLLEKARDELMVTGANAVLAAASSKAKAL
EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEECCCHHHHH
GGFTSPQRAAYRAFEDAKAYEAFVLKRRESRAITSCLREAHPMLLTTPARLDADPYLLNT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEC
PGGTWDVRDGTRRDHNPLDLITKQTALDPTDTGAEIWNRALNVFFQSDRELIGYVQRIVG
CCCCEECCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LAAIGTVMVEALVIAYGDGRNGKSTFWNTIARVLGTYAGNMSADVLTIGGNRNVKPELAE
HHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHH
AKGKRLIIAAESEEGVRLSTSTVKQLASTDQIYAEKKYKAPFAFTPSHTLILYTNHLPRV
CCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEECCCCCC
GAMDAGIWRRLIVIPFNAVIESSSDVKNYADHLYETAGGAVLAWIMEGSRLIHAEDYQLT
CCCCHHHHHEEEEEEHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCC
PPAQVVAASSAYREENNWFAQFLDARCEVDPSLSERAGDLYQEYRAWAQSTSGWARPMAD
CCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH
FNATLEQSGFERRKSKHGMYVYGLALTSEFNS
HHHHHHHHHHHHHHHCCCEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA