| Definition | Propionibacterium acnes KPA171202, complete genome. |
|---|---|
| Accession | NC_006085 |
| Length | 2,560,265 |
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The map label for this gene is 50843056
Identifier: 50843056
GI number: 50843056
Start: 1711359
End: 1712093
Strand: Reverse
Name: 50843056
Synonym: PPA1585
Alternate gene names: NA
Gene position: 1712093-1711359 (Counterclockwise)
Preceding gene: 50843057
Following gene: 50843055
Centisome position: 66.87
GC content: 63.67
Gene sequence:
>735_bases ATGTACATGACCGAAAACCACTCCGACCAGGGGAACACGCAAAGGAGGCCGGTCATGACGACACTCAAGTTCACCAAGCA GCGCAAAGGCCGCAAGCAACTCGCCGCTTTTCTCGCCACCCAGCTGCGAGCGACCGTCGAGTATCTGGGAACCCCAACGT TTGCCTACCAGATTGGCGAGGCCATGTTGGATCGTGACTGGCTGCTGCATCTGCCCGAGGACACCGACGTGGCCGGGCTG GTCGAGGCGGCCGCGCAGGCCGGATTCCCGACGGACACCACCGACGAGCCAGGCGAGTTGGGGTTGACGTTGGCGTTCCC CACCACCGGTTGGGAGGACACCACGAAAGGGAAGGTGGAGGCGACGCTAGCAGCGAAAGGAGAGCTCATCGCCAAAGCAC TCCAGATCCCCGCAACCCCGATGAGCATCGACGCCGAGGCCGGGACGGTCGAGTTCCCCTGGTTCGACGTAGCGCCCGAC CCGCAGGTAGTGGAGGCCACCACGGTGCTGATCGCCCGGATCATCGACCACGCCAAAACCGCCACAAGAGCCTCAGCCAA ACCTGCCGAAACGGGCGGGAACGACAAATATGCGATGCGCTGCTGGCTGCTGCGCCTCGGTCTGATCGGCGACGACACCA AACCCGTCCGCCGCACCTTGCTCAAACACTTGGACGGCAACGCCGCCTGGCGCACCCCACCCACCCACAAGGACACCCGC GATGAACACAATTGA
Upstream 100 bases:
>100_bases ACGGCCAACAGTTGGCCTACCTGGATGTGGTGAAGGCCGTGGATCGAGGCAAGAAATAGGTGGCCGTCCGGACTTGCTAT CTGGTCGGGATAGAGCGTGT
Downstream 100 bases:
>100_bases CGACCTCGACCAGCAAGATCGCGACCCGCACCCAAACCTCGTCCACGAGCCTGCTCACCGTCTACATGAACAGCCAGCGG GCGGGCAACGAGCTGCTCGA
Product: phage-associated protein
Products: NA
Alternate protein names: Phage-Associated Protein
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MYMTENHSDQGNTQRRPVMTTLKFTKQRKGRKQLAAFLATQLRATVEYLGTPTFAYQIGEAMLDRDWLLHLPEDTDVAGL VEAAAQAGFPTDTTDEPGELGLTLAFPTTGWEDTTKGKVEATLAAKGELIAKALQIPATPMSIDAEAGTVEFPWFDVAPD PQVVEATTVLIARIIDHAKTATRASAKPAETGGNDKYAMRCWLLRLGLIGDDTKPVRRTLLKHLDGNAAWRTPPTHKDTR DEHN
Sequences:
>Translated_244_residues MYMTENHSDQGNTQRRPVMTTLKFTKQRKGRKQLAAFLATQLRATVEYLGTPTFAYQIGEAMLDRDWLLHLPEDTDVAGL VEAAAQAGFPTDTTDEPGELGLTLAFPTTGWEDTTKGKVEATLAAKGELIAKALQIPATPMSIDAEAGTVEFPWFDVAPD PQVVEATTVLIARIIDHAKTATRASAKPAETGGNDKYAMRCWLLRLGLIGDDTKPVRRTLLKHLDGNAAWRTPPTHKDTR DEHN >Mature_244_residues MYMTENHSDQGNTQRRPVMTTLKFTKQRKGRKQLAAFLATQLRATVEYLGTPTFAYQIGEAMLDRDWLLHLPEDTDVAGL VEAAAQAGFPTDTTDEPGELGLTLAFPTTGWEDTTKGKVEATLAAKGELIAKALQIPATPMSIDAEAGTVEFPWFDVAPD PQVVEATTVLIARIIDHAKTATRASAKPAETGGNDKYAMRCWLLRLGLIGDDTKPVRRTLLKHLDGNAAWRTPPTHKDTR DEHN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26796; Mature: 26796
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYMTENHSDQGNTQRRPVMTTLKFTKQRKGRKQLAAFLATQLRATVEYLGTPTFAYQIGE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH AMLDRDWLLHLPEDTDVAGLVEAAAQAGFPTDTTDEPGELGLTLAFPTTGWEDTTKGKVE HHHCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEE ATLAAKGELIAKALQIPATPMSIDAEAGTVEFPWFDVAPDPQVVEATTVLIARIIDHAKT EEEHHHHHHHHHHHHCCCCCCEECCCCCEEECCEECCCCCCHHHHHHHHHHHHHHHHHHH ATRASAKPAETGGNDKYAMRCWLLRLGLIGDDTKPVRRTLLKHLDGNAAWRTPPTHKDTR HHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC DEHN CCCC >Mature Secondary Structure MYMTENHSDQGNTQRRPVMTTLKFTKQRKGRKQLAAFLATQLRATVEYLGTPTFAYQIGE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH AMLDRDWLLHLPEDTDVAGLVEAAAQAGFPTDTTDEPGELGLTLAFPTTGWEDTTKGKVE HHHCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEE ATLAAKGELIAKALQIPATPMSIDAEAGTVEFPWFDVAPDPQVVEATTVLIARIIDHAKT EEEHHHHHHHHHHHHCCCCCCEECCCCCEEECCEECCCCCCHHHHHHHHHHHHHHHHHHH ATRASAKPAETGGNDKYAMRCWLLRLGLIGDDTKPVRRTLLKHLDGNAAWRTPPTHKDTR HHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC DEHN CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA