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The map label for this gene is 50843001

Identifier: 50843001

GI number: 50843001

Start: 1645109

End: 1645867

Strand: Reverse

Name: 50843001

Synonym: PPA1523

Alternate gene names: NA

Gene position: 1645867-1645109 (Counterclockwise)

Preceding gene: 50843004

Following gene: 50842999

Centisome position: 64.29

GC content: 62.19

Gene sequence:

>759_bases
ATGAGGAGATCTGTCTGCATCAGCCTACTAATCATCACGGTGGGGATTTGCTTGCTGGCCTTACCAGCTCCCAGCCACAG
CGTTGCTGCCGTTCCCGCGCGAAGTGTGGCGAATCGTCCGACTCCGCCGGTGCTAGGCCCCGTCATCAAAGGGTTTGCGC
CACCTGCCGAAAAATGGCTGCCGGGTAGTAGGGGAGTGGAATTTGCGGCCTCCGTGGGAGAACCAGTGACGACCGTGACG
GCTGGGGTGGTCGTTTTTGCTGGCCAGGTCGCGGGGGCTGGGGTGGTGAGCATCCTGCTTGCTGACGGTCGTCGGACAAC
CCACATGCCGGTTGTGCCTAGCGTTGCTGTCGGCCAGGTAGTGGTTCCTGGCCAGCAGATCGGAGTTGTCGGGATGGGGC
CACCATGCACCCGCACTTGTTTGCACTGGGGGTTGAAGAAGGGAGATGTTTATCAAAACCCCATGACATTGTTGCAACTT
CAGGTGCGGTTGCTGCCCTTGGACAGTCGGCCTCATTCAGCGTCGGGGCACGGATGGCCTGTGCGGCCCCTGAGCCTGCC
AGGGGGCAGCAGGAGGAAAGCTGCCTCAAGCGGTGCCCTCATGCCTCCGTGGCGTGGAGCTGGGCGGGACGCCGCGTTAG
GCATTGATACGACGGTGACCGAAGCCACCCGAGGTGGCTCAGGCGCGGGGATGAGCCTGGCGAAACGCAGTGCGCAATCT
TTCGGTGGAAACGTGGGTGTAGATCTGCGTGGTGGCTAG

Upstream 100 bases:

>100_bases
CAGGCGATTGTCCACAGGGGGCGAGGTCCGATGTTGTCGGGTTATCCACAGTTGGAAAATAAGTTGGCGAAGATCGCGAT
CTGTCACGATAACTGAAGAC

Downstream 100 bases:

>100_bases
GGATTCGTGGCCCAATATGTCCTGGACGGTGCGCAGATCTGCTCCGCCTTCCAAAAGATGGGTCGCCATCGCGTGACGTA
ACCCGTGAGGCCCAAGGTCG

Product: membrane spanning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MRRSVCISLLIITVGICLLALPAPSHSVAAVPARSVANRPTPPVLGPVIKGFAPPAEKWLPGSRGVEFAASVGEPVTTVT
AGVVVFAGQVAGAGVVSILLADGRRTTHMPVVPSVAVGQVVVPGQQIGVVGMGPPCTRTCLHWGLKKGDVYQNPMTLLQL
QVRLLPLDSRPHSASGHGWPVRPLSLPGGSRRKAASSGALMPPWRGAGRDAALGIDTTVTEATRGGSGAGMSLAKRSAQS
FGGNVGVDLRGG

Sequences:

>Translated_252_residues
MRRSVCISLLIITVGICLLALPAPSHSVAAVPARSVANRPTPPVLGPVIKGFAPPAEKWLPGSRGVEFAASVGEPVTTVT
AGVVVFAGQVAGAGVVSILLADGRRTTHMPVVPSVAVGQVVVPGQQIGVVGMGPPCTRTCLHWGLKKGDVYQNPMTLLQL
QVRLLPLDSRPHSASGHGWPVRPLSLPGGSRRKAASSGALMPPWRGAGRDAALGIDTTVTEATRGGSGAGMSLAKRSAQS
FGGNVGVDLRGG
>Mature_252_residues
MRRSVCISLLIITVGICLLALPAPSHSVAAVPARSVANRPTPPVLGPVIKGFAPPAEKWLPGSRGVEFAASVGEPVTTVT
AGVVVFAGQVAGAGVVSILLADGRRTTHMPVVPSVAVGQVVVPGQQIGVVGMGPPCTRTCLHWGLKKGDVYQNPMTLLQL
QVRLLPLDSRPHSASGHGWPVRPLSLPGGSRRKAASSGALMPPWRGAGRDAALGIDTTVTEATRGGSGAGMSLAKRSAQS
FGGNVGVDLRGG

Specific function: Unknown

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 25639; Mature: 25639

Theoretical pI: Translated: 11.74; Mature: 11.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSVCISLLIITVGICLLALPAPSHSVAAVPARSVANRPTPPVLGPVIKGFAPPAEKWL
CCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHCCCCCCCHHHHHHHCCCCCHHHHC
PGSRGVEFAASVGEPVTTVTAGVVVFAGQVAGAGVVSILLADGRRTTHMPVVPSVAVGQV
CCCCCCEEHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEE
VVPGQQIGVVGMGPPCTRTCLHWGLKKGDVYQNPMTLLQLQVRLLPLDSRPHSASGHGWP
EECCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCHHHEEEEEEEEECCCCCCCCCCCCCC
VRPLSLPGGSRRKAASSGALMPPWRGAGRDAALGIDTTVTEATRGGSGAGMSLAKRSAQS
CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHCCCCCCCCHHHHHHHHHH
FGGNVGVDLRGG
CCCCCCEEECCC
>Mature Secondary Structure
MRRSVCISLLIITVGICLLALPAPSHSVAAVPARSVANRPTPPVLGPVIKGFAPPAEKWL
CCHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHCCCCCCCHHHHHHHCCCCCHHHHC
PGSRGVEFAASVGEPVTTVTAGVVVFAGQVAGAGVVSILLADGRRTTHMPVVPSVAVGQV
CCCCCCEEHHHCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEE
VVPGQQIGVVGMGPPCTRTCLHWGLKKGDVYQNPMTLLQLQVRLLPLDSRPHSASGHGWP
EECCCEEEEEECCCCHHHHHHHHCCCCCCCCCCCHHHEEEEEEEEECCCCCCCCCCCCCC
VRPLSLPGGSRRKAASSGALMPPWRGAGRDAALGIDTTVTEATRGGSGAGMSLAKRSAQS
CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHCCCCCCCCHHHHHHHHHH
FGGNVGVDLRGG
CCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]